Gene annotation
Transcriptome id Sobic.008G133700.3,Sobic.008G133700.5,Sobic.008G133700.4,Sobic.008G133700.2,Sobic.008G133700.1
Synonym MYB59, Sb08g018580, ATMYB59-2, ATMYB59-1, ATMYB59-3, ATMYB59
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1B6PDH3 , A0A1B6PDJ9 , A0A1Z5R7D0 , A0A1B6PDX2
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF484
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G59780 : myb domain protein 59,myb domain protein 48
RAP-DB (Rice) LOC_Os12g37970.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a025432 , Zm00025a004207 , Zm00025a027136
Brachypodium KQJ87177 , KQJ87159 , KQJ87158 , KQJ86220 , KQJ86221 , KQJ86222 , KQJ86219 , KQJ86218 , KQJ86217
Barley HORVU5Hr1G021750.6 , HORVU5Hr1G021750.4 , HORVU5Hr1G021750.5 , HORVU5Hr1G021750.2 , HORVU5Hr1G021750.3 , HORVU5Hr1G021750.1
Wheat TraesCS5B02G089200 , TraesCS5B02G089200 , TraesCS4A02G173300 , TraesCS4A02G173300 , TraesCS5A02G083100 , TraesCS5A02G083100 , TraesCS4D02G142300 , TraesCS5D02G095600 , TraesCS5D02G095600 , TraesCS4B02G143700 , TraesCS4B02G143700
Populus PNT53456 , PNT31205


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G113100 "OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659881)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
2 Sobic.005G127800 expressed protein -
3 Sobic.008G089900 PQ loop repeat domain containing protein, expressed K12386: cystinosin
4 Sobic.003G242000 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
5 Sobic.005G224800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.002G262300 lecithine cholesterol acyltransferase, putative, expressed -
7 Sobic.006G051800 calmodulin-binding transcription activator 4, putative, expressed -
8 Sobic.010G272800 OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed K03798: ftsH, cell division protease FtsH
9 Sobic.003G301500 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K17623: PUDP, pseudouridine 5'-phosphatase
10 Sobic.001G062300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
11 Sobic.007G006200 NBS-LRR disease resistance protein, putative, expressed -
12 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
13 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
14 Sobic.010G177400 dehydrogenase/reductase SDR family member 12, putative, expressed K11168: dehydrogenase/reductase SDR family member 12
15 Sobic.003G344800 phosphatidate cytidylyltransferase, putative, expressed K15892: farnesol kinase
16 Sobic.004G179300 chloride channel protein, putative, expressed K05016: chloride channel 7
17 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
18 Sobic.008G167600 VTC2, putative, expressed -
19 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
20 Sobic.007G046950 - -


Gene co-expression network
sample Sobic008G133700 Sobic008G133700 Sobic004G113100 Sobic004G113100 Sobic008G133700--Sobic004G113100 Sobic005G127800 Sobic005G127800 Sobic008G133700--Sobic005G127800 Sobic008G089900 Sobic008G089900 Sobic008G133700--Sobic008G089900 Sobic003G242000 Sobic003G242000 Sobic008G133700--Sobic003G242000 Sobic005G224800 Sobic005G224800 Sobic008G133700--Sobic005G224800 Sobic002G262300 Sobic002G262300 Sobic008G133700--Sobic002G262300 Sobic006G051800 Sobic006G051800 Sobic008G133700--Sobic006G051800 Sobic010G272800 Sobic010G272800 Sobic008G133700--Sobic010G272800 Sobic003G301500 Sobic003G301500 Sobic008G133700--Sobic003G301500 Sobic003G103300 Sobic003G103300 Sobic004G113100--Sobic003G103300 Sobic004G125800 Sobic004G125800 Sobic004G113100--Sobic004G125800 Sobic001G015200 Sobic001G015200 Sobic004G113100--Sobic001G015200 Sobic007G046950 Sobic007G046950 Sobic004G113100--Sobic007G046950 Sobic010G101000 Sobic010G101000 Sobic004G113100--Sobic010G101000 Sobic009G225600 Sobic009G225600 Sobic004G113100--Sobic009G225600 Sobic005G062700 Sobic005G062700 Sobic004G113100--Sobic005G062700 Sobic002G030900 Sobic002G030900 Sobic004G113100--Sobic002G030900 Sobic001G104700 Sobic001G104700 Sobic004G113100--Sobic001G104700 Sobic005G127800--Sobic007G046950 Sobic005G127800--Sobic004G113100 Sobic002G412100 Sobic002G412100 Sobic005G127800--Sobic002G412100 Sobic002G060800 Sobic002G060800 Sobic005G127800--Sobic002G060800 Sobic001G104600 Sobic001G104600 Sobic005G127800--Sobic001G104600 Sobic006G259600 Sobic006G259600 Sobic005G127800--Sobic006G259600 Sobic003G026600 Sobic003G026600 Sobic005G127800--Sobic003G026600 Sobic003G166200 Sobic003G166200 Sobic005G127800--Sobic003G166200 Sobic001G046000 Sobic001G046000 Sobic005G127800--Sobic001G046000 Sobic006G083800 Sobic006G083800 Sobic008G089900--Sobic006G083800 Sobic009G162600 Sobic009G162600 Sobic008G089900--Sobic009G162600 Sobic004G103000 Sobic004G103000 Sobic008G089900--Sobic004G103000 Sobic002G204200 Sobic002G204200 Sobic008G089900--Sobic002G204200 Sobic002G001000 Sobic002G001000 Sobic008G089900--Sobic002G001000 Sobic001G414500 Sobic001G414500 Sobic008G089900--Sobic001G414500 Sobic001G243200 Sobic001G243200 Sobic008G089900--Sobic001G243200 Sobic009G187400 Sobic009G187400 Sobic008G089900--Sobic009G187400 Sobic009G207300 Sobic009G207300 Sobic008G089900--Sobic009G207300 Sobic003G198800 Sobic003G198800 Sobic003G242000--Sobic003G198800 Sobic003G242000--Sobic002G262300 Sobic003G115900 Sobic003G115900 Sobic003G242000--Sobic003G115900 Sobic002G383600 Sobic002G383600 Sobic003G242000--Sobic002G383600 Sobic001G064200 Sobic001G064200 Sobic003G242000--Sobic001G064200 Sobic008G152600 Sobic008G152600 Sobic003G242000--Sobic008G152600 Sobic001G409300 Sobic001G409300 Sobic003G242000--Sobic001G409300 Sobic008G059100 Sobic008G059100 Sobic003G242000--Sobic008G059100 Sobic006G002300 Sobic006G002300 Sobic003G242000--Sobic006G002300 Sobic005G224800--Sobic006G259600 Sobic001G359300 Sobic001G359300 Sobic005G224800--Sobic001G359300 Sobic002G382700 Sobic002G382700 Sobic005G224800--Sobic002G382700 Sobic006G090100 Sobic006G090100 Sobic005G224800--Sobic006G090100 Sobic010G131700 Sobic010G131700 Sobic005G224800--Sobic010G131700 Sobic001G333800 Sobic001G333800 Sobic005G224800--Sobic001G333800 Sobic001G207800 Sobic001G207800 Sobic005G224800--Sobic001G207800 Sobic005G224800--Sobic001G243200 Sobic010G275700 Sobic010G275700 Sobic005G224800--Sobic010G275700 Sobic007G210500 Sobic007G210500 Sobic002G262300--Sobic007G210500 Sobic009G080400 Sobic009G080400 Sobic002G262300--Sobic009G080400 Sobic001G305500 Sobic001G305500 Sobic002G262300--Sobic001G305500 Sobic006G104600 Sobic006G104600 Sobic002G262300--Sobic006G104600 Sobic002G128200 Sobic002G128200 Sobic002G262300--Sobic002G128200 Sobic003G320700 Sobic003G320700 Sobic002G262300--Sobic003G320700 Sobic001G517800 Sobic001G517800 Sobic002G262300--Sobic001G517800 Sobic002G262300--Sobic003G242000 Sobic001G062300 Sobic001G062300 Sobic002G262300--Sobic001G062300 Sobic003G029500 Sobic003G029500 Sobic006G051800--Sobic003G029500 Sobic009G074400 Sobic009G074400 Sobic006G051800--Sobic009G074400 Sobic004G231900 Sobic004G231900 Sobic006G051800--Sobic004G231900 Sobic006G051800--Sobic002G383600 Sobic006G219600 Sobic006G219600 Sobic006G051800--Sobic006G219600 Sobic004G189200 Sobic004G189200 Sobic006G051800--Sobic004G189200 Sobic006G257800 Sobic006G257800 Sobic006G051800--Sobic006G257800 Sobic005G201000 Sobic005G201000 Sobic006G051800--Sobic005G201000 Sobic008G167600 Sobic008G167600 Sobic006G051800--Sobic008G167600 Sobic010G223200 Sobic010G223200 Sobic010G272800--Sobic010G223200 Sobic010G272800--Sobic003G301500 Sobic002G129400 Sobic002G129400 Sobic010G272800--Sobic002G129400 Sobic010G043100 Sobic010G043100 Sobic010G272800--Sobic010G043100 Sobic010G272800--Sobic001G062300 Sobic001G223550 Sobic001G223550 Sobic010G272800--Sobic001G223550 Sobic009G241200 Sobic009G241200 Sobic010G272800--Sobic009G241200 Sobic009G011600 Sobic009G011600 Sobic010G272800--Sobic009G011600 Sobic010G020800 Sobic010G020800 Sobic010G272800--Sobic010G020800 Sobic003G301500--Sobic004G189200 Sobic003G301500--Sobic008G167600 Sobic002G431500 Sobic002G431500 Sobic003G301500--Sobic002G431500 Sobic003G301500--Sobic001G062300 Sobic003G301500--Sobic010G272800 Sobic003G301500--Sobic010G223200 Sobic003G301500--Sobic010G020800 Sobic002G291800 Sobic002G291800 Sobic003G301500--Sobic002G291800 Sobic007G006200 Sobic007G006200 Sobic003G301500--Sobic007G006200
Octagon: transcription factors


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