Gene annotation
Transcriptome id Sobic.005G127800.1
Synonym Sb05g018970
Functional annotation expressed protein
UniProt C5Y2U1
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27004 PTHR27004:SF36
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G34930 : disease resistance family protein / LRR family protein
RAP-DB (Rice) LOC_Os11g35840.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G046950 - -
2 Sobic.004G113100 "OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659881)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
3 Sobic.002G412100 flowering promoting factor-like 1, putative, expressed -
4 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
5 Sobic.001G104600 expressed protein -
6 Sobic.006G259600 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
7 Sobic.003G026600 osFTL8 FT-Like8 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
8 Sobic.003G166200 expressed protein -
9 Sobic.001G046000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
11 Sobic.002G116000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Granule -bound starch synthase 1b (Os)(PubMedID : 27208977)@"GbssIIa(Ortholog in maize:Jiang et al., 2013)"(PubMedID : 31659853)@starch synthase, putative, expressed K13679: granule-bound starch synthase
12 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -
13 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
14 Sobic.002G047400 "protein containing PDZ domain, a K-box domain, and a TPR region"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SHOOT1 protein, putative, expressed -
15 Sobic.007G006200 NBS-LRR disease resistance protein, putative, expressed -
16 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.008G133700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.009G241100 expressed protein -
19 Sobic.005G172400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PAP fibrillin family domain containing protein, expressed -
20 Sobic.008G149100 B3 DNA binding domain containing protein, expressed -


Gene co-expression network
sample Sobic005G127800 Sobic005G127800 Sobic007G046950 Sobic007G046950 Sobic005G127800--Sobic007G046950 Sobic004G113100 Sobic004G113100 Sobic005G127800--Sobic004G113100 Sobic002G412100 Sobic002G412100 Sobic005G127800--Sobic002G412100 Sobic002G060800 Sobic002G060800 Sobic005G127800--Sobic002G060800 Sobic001G104600 Sobic001G104600 Sobic005G127800--Sobic001G104600 Sobic006G259600 Sobic006G259600 Sobic005G127800--Sobic006G259600 Sobic003G026600 Sobic003G026600 Sobic005G127800--Sobic003G026600 Sobic003G166200 Sobic003G166200 Sobic005G127800--Sobic003G166200 Sobic001G046000 Sobic001G046000 Sobic005G127800--Sobic001G046000 Sobic007G046950--Sobic001G104600 Sobic001G015200 Sobic001G015200 Sobic007G046950--Sobic001G015200 Sobic010G101000 Sobic010G101000 Sobic007G046950--Sobic010G101000 Sobic002G030900 Sobic002G030900 Sobic007G046950--Sobic002G030900 Sobic007G046950--Sobic002G060800 Sobic001G104700 Sobic001G104700 Sobic007G046950--Sobic001G104700 Sobic002G047400 Sobic002G047400 Sobic007G046950--Sobic002G047400 Sobic003G103300 Sobic003G103300 Sobic007G046950--Sobic003G103300 Sobic004G125800 Sobic004G125800 Sobic007G046950--Sobic004G125800 Sobic004G113100--Sobic003G103300 Sobic004G113100--Sobic004G125800 Sobic004G113100--Sobic001G015200 Sobic004G113100--Sobic007G046950 Sobic004G113100--Sobic010G101000 Sobic009G225600 Sobic009G225600 Sobic004G113100--Sobic009G225600 Sobic005G062700 Sobic005G062700 Sobic004G113100--Sobic005G062700 Sobic004G113100--Sobic002G030900 Sobic004G113100--Sobic001G104700 Sobic002G390500 Sobic002G390500 Sobic002G412100--Sobic002G390500 Sobic010G135600 Sobic010G135600 Sobic002G412100--Sobic010G135600 Sobic002G136100 Sobic002G136100 Sobic002G412100--Sobic002G136100 Sobic003G343500 Sobic003G343500 Sobic002G412100--Sobic003G343500 Sobic001G333800 Sobic001G333800 Sobic002G412100--Sobic001G333800 Sobic001G283100 Sobic001G283100 Sobic002G412100--Sobic001G283100 Sobic002G412100--Sobic006G259600 Sobic010G099700 Sobic010G099700 Sobic002G412100--Sobic010G099700 Sobic004G356400 Sobic004G356400 Sobic002G412100--Sobic004G356400 Sobic002G351200 Sobic002G351200 Sobic002G060800--Sobic002G351200 Sobic002G060800--Sobic009G225600 Sobic010G223200 Sobic010G223200 Sobic002G060800--Sobic010G223200 Sobic002G060800--Sobic003G103300 Sobic002G060800--Sobic001G046000 Sobic006G090100 Sobic006G090100 Sobic002G060800--Sobic006G090100 Sobic002G060800--Sobic010G101000 Sobic004G317700 Sobic004G317700 Sobic002G060800--Sobic004G317700 Sobic004G271600 Sobic004G271600 Sobic002G060800--Sobic004G271600 Sobic001G104600--Sobic001G104700 Sobic001G104600--Sobic001G015200 Sobic001G104600--Sobic007G046950 Sobic001G411100 Sobic001G411100 Sobic001G104600--Sobic001G411100 Sobic001G104600--Sobic002G030900 Sobic001G104600--Sobic003G103300 Sobic005G172400 Sobic005G172400 Sobic001G104600--Sobic005G172400 Sobic002G370600 Sobic002G370600 Sobic001G104600--Sobic002G370600 Sobic001G104600--Sobic010G101000 Sobic006G259600--Sobic006G090100 Sobic001G207800 Sobic001G207800 Sobic006G259600--Sobic001G207800 Sobic006G259600--Sobic003G166200 Sobic002G081400 Sobic002G081400 Sobic006G259600--Sobic002G081400 Sobic006G212800 Sobic006G212800 Sobic006G259600--Sobic006G212800 Sobic009G073900 Sobic009G073900 Sobic006G259600--Sobic009G073900 Sobic001G509200 Sobic001G509200 Sobic006G259600--Sobic001G509200 Sobic001G243200 Sobic001G243200 Sobic006G259600--Sobic001G243200 Sobic001G077300 Sobic001G077300 Sobic006G259600--Sobic001G077300 Sobic006G057866 Sobic006G057866 Sobic003G026600--Sobic006G057866 Sobic003G026600--Sobic002G136100 Sobic003G026600--Sobic002G370600 Sobic003G255900 Sobic003G255900 Sobic003G026600--Sobic003G255900 Sobic003G371250 Sobic003G371250 Sobic003G026600--Sobic003G371250 Sobic003G327000 Sobic003G327000 Sobic003G026600--Sobic003G327000 Sobic001G317800 Sobic001G317800 Sobic003G026600--Sobic001G317800 Sobic001G200000 Sobic001G200000 Sobic003G026600--Sobic001G200000 Sobic007G006400 Sobic007G006400 Sobic003G026600--Sobic007G006400 Sobic003G166200--Sobic006G259600 Sobic003G166200--Sobic001G333800 Sobic003G166200--Sobic001G207800 Sobic003G166200--Sobic006G090100 Sobic001G258200 Sobic001G258200 Sobic003G166200--Sobic001G258200 Sobic009G093100 Sobic009G093100 Sobic003G166200--Sobic009G093100 Sobic003G186900 Sobic003G186900 Sobic003G166200--Sobic003G186900 Sobic006G221000 Sobic006G221000 Sobic003G166200--Sobic006G221000 Sobic001G303200 Sobic001G303200 Sobic003G166200--Sobic001G303200 Sobic001G046000--Sobic009G225600 Sobic001G485100 Sobic001G485100 Sobic001G046000--Sobic001G485100 Sobic010G104700 Sobic010G104700 Sobic001G046000--Sobic010G104700 Sobic001G046000--Sobic002G047400 Sobic003G186800 Sobic003G186800 Sobic001G046000--Sobic003G186800 Sobic001G046000--Sobic010G101000 Sobic001G046000--Sobic006G090100 Sobic004G153900 Sobic004G153900 Sobic001G046000--Sobic004G153900 Sobic006G191500 Sobic006G191500 Sobic001G046000--Sobic006G191500
Octagon: transcription factors


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