Gene annotation
Transcriptome id Sobic.005G050300.1
Synonym Sb05g004115
Functional annotation leucine-rich repeat receptor-like protein kinase 1, putative, expressed
UniProt A0A1B6PQ74
Pfam PF08263 PF00560 PF00069 PF13855
Panther DB PTHR27000 PTHR27000:SF36
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G35710 : Protein kinase family protein with leucine-rich repeat domain
RAP-DB (Rice) LOC_Os10g33040.1 : receptor-like protein kinase precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ96142
Barley HORVU1Hr1G000660.21 , HORVU1Hr1G000660.20 , HORVU1Hr1G009600.1 , HORVU1Hr1G009080.3 , HORVU1Hr1G000660.7 , HORVU1Hr1G000660.6 , HORVU1Hr1G000660.5 , HORVU1Hr1G000660.4 , HORVU1Hr1G000660.3 , HORVU1Hr1G000660.9 , HORVU1Hr1G000660.8 , HORVU1Hr1G000660.11 , HORVU1Hr1G000660.10 , HORVU1Hr1G000660.19 , HORVU1Hr1G000660.18 , HORVU1Hr1G000660.17 , HORVU1Hr1G000660.16 , HORVU1Hr1G000660.12
Wheat TraesCS6A02G314300 , TraesCS6A02G314300 , TraesCS1B02G009900 , TraesCS1A02G006900 , TraesCS1D02G002700 , TraesCS1B02G008500 , TraesCS1A02G006800 , TraesCS1B02G007400 , TraesCS1B02G006500 , TraesCSU02G087900 , TraesCS1A02G007000 , TraesCS3D02G452300 , TraesCS1B02G009200 , TraesCS1B02G008700 , TraesCS1B02G008700 , TraesCS1B02G009800 , TraesCS1B02G009800 , TraesCS1A02G006200 , TraesCS1A02G006300 , TraesCS1D02G001700 , TraesCS1B02G009000 , TraesCS1B02G009000 , TraesCS1D02G001500 , TraesCS1B02G006800 , TraesCS1D02G002900 , TraesCS1D02G453800 , TraesCS1A02G007100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G003000 methionine S-methyltransferase, putative, expressed K08247: methionine S-methyltransferase
2 Sobic.001G142800 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
3 Sobic.004G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
4 Sobic.008G150100 resistance protein, putative, expressed -
5 Sobic.002G041200 similar to LOC Os02g20360: tyrosine aminotransferase(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@similar to LOC.Os02g20360:tyrosine aminotranferase(PubMedID : 24655390)@tyrosine aminotransferase, putative, expressed K00815: tyrosine aminotransferase
6 Sobic.002G018300 expressed protein -
7 Sobic.009G016000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
8 Sobic.002G041100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine aminotransferase, putative, expressed K00815: tyrosine aminotransferase
9 Sobic.001G442300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
10 Sobic.001G200000 disease resistance RPP13-like protein 1, putative, expressed -
11 Sobic.004G130600 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
12 Sobic.006G259700 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
13 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
14 Sobic.005G127800 expressed protein -
15 Sobic.007G211900 mapped into a stay green mQTL (QSTG meta2.7)(PubMedID : 24655390)@"1,2-diacylglycerol 3-beta-galactosyltransferase MGD2 (At)"(PubMedID : 27208977)@MGD2, putative, expressed K03715: 1,2-diacylglycerol 3-beta-galactosyltransferase
16 Sobic.008G180800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
17 Sobic.004G113100 "OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659881)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
18 Sobic.001G027300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
19 Sobic.003G076900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Sulfoquinovosyldiacylglycerol 2, UDP-glycosyltransferase SQD2 (At)"(PubMedID : 27208977)@glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
20 Sobic.001G353200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1


Gene co-expression network
sample Sobic005G050300 Sobic005G050300 Sobic009G003000 Sobic009G003000 Sobic005G050300--Sobic009G003000 Sobic001G142800 Sobic001G142800 Sobic005G050300--Sobic001G142800 Sobic004G238100 Sobic004G238100 Sobic005G050300--Sobic004G238100 Sobic008G150100 Sobic008G150100 Sobic005G050300--Sobic008G150100 Sobic002G041200 Sobic002G041200 Sobic005G050300--Sobic002G041200 Sobic002G018300 Sobic002G018300 Sobic005G050300--Sobic002G018300 Sobic009G016000 Sobic009G016000 Sobic005G050300--Sobic009G016000 Sobic002G041100 Sobic002G041100 Sobic005G050300--Sobic002G041100 Sobic001G442300 Sobic001G442300 Sobic005G050300--Sobic001G442300 Sobic009G003000--Sobic002G041200 Sobic009G003000--Sobic001G142800 Sobic006G259700 Sobic006G259700 Sobic009G003000--Sobic006G259700 Sobic009G003000--Sobic004G238100 Sobic010G225701 Sobic010G225701 Sobic009G003000--Sobic010G225701 Sobic006G271500 Sobic006G271500 Sobic009G003000--Sobic006G271500 Sobic006G024600 Sobic006G024600 Sobic009G003000--Sobic006G024600 Sobic009G246300 Sobic009G246300 Sobic009G003000--Sobic009G246300 Sobic001G261545 Sobic001G261545 Sobic009G003000--Sobic001G261545 Sobic001G142800--Sobic002G041200 Sobic001G142800--Sobic004G238100 Sobic001G142800--Sobic009G003000 Sobic001G142800--Sobic002G041100 Sobic001G142800--Sobic006G259700 Sobic003G134600 Sobic003G134600 Sobic001G142800--Sobic003G134600 Sobic009G176800 Sobic009G176800 Sobic001G142800--Sobic009G176800 Sobic001G142800--Sobic006G024600 Sobic001G142800--Sobic010G225701 Sobic004G238100--Sobic001G142800 Sobic005G091300 Sobic005G091300 Sobic004G238100--Sobic005G091300 Sobic004G238100--Sobic009G003000 Sobic004G238100--Sobic006G271500 Sobic008G119800 Sobic008G119800 Sobic004G238100--Sobic008G119800 Sobic004G238100--Sobic009G246300 Sobic004G238100--Sobic006G259700 Sobic004G113100 Sobic004G113100 Sobic004G238100--Sobic004G113100 Sobic004G238100--Sobic009G176800 Sobic008G150100--Sobic006G259700 Sobic010G122000 Sobic010G122000 Sobic008G150100--Sobic010G122000 Sobic003G192600 Sobic003G192600 Sobic008G150100--Sobic003G192600 Sobic001G438700 Sobic001G438700 Sobic008G150100--Sobic001G438700 Sobic004G103400 Sobic004G103400 Sobic008G150100--Sobic004G103400 Sobic008G133700 Sobic008G133700 Sobic008G150100--Sobic008G133700 Sobic001G353200 Sobic001G353200 Sobic008G150100--Sobic001G353200 Sobic003G344200 Sobic003G344200 Sobic008G150100--Sobic003G344200 Sobic004G153100 Sobic004G153100 Sobic008G150100--Sobic004G153100 Sobic002G041200--Sobic009G003000 Sobic002G041200--Sobic001G142800 Sobic002G041200--Sobic006G259700 Sobic002G041200--Sobic002G041100 Sobic007G021100 Sobic007G021100 Sobic002G041200--Sobic007G021100 Sobic005G110541 Sobic005G110541 Sobic002G041200--Sobic005G110541 Sobic002G041200--Sobic004G238100 Sobic005G100800 Sobic005G100800 Sobic002G041200--Sobic005G100800 Sobic002G041200--Sobic001G353200 Sobic009G142800 Sobic009G142800 Sobic002G018300--Sobic009G142800 Sobic002G018300--Sobic004G238100 Sobic001G269900 Sobic001G269900 Sobic002G018300--Sobic001G269900 Sobic006G191100 Sobic006G191100 Sobic002G018300--Sobic006G191100 Sobic010G165500 Sobic010G165500 Sobic002G018300--Sobic010G165500 Sobic002G018300--Sobic005G050300 Sobic002G018300--Sobic006G271500 Sobic007G054500 Sobic007G054500 Sobic002G018300--Sobic007G054500 Sobic010G165200 Sobic010G165200 Sobic002G018300--Sobic010G165200 Sobic003G139500 Sobic003G139500 Sobic009G016000--Sobic003G139500 Sobic009G016000--Sobic009G246300 Sobic010G183600 Sobic010G183600 Sobic009G016000--Sobic010G183600 Sobic008G180800 Sobic008G180800 Sobic009G016000--Sobic008G180800 Sobic001G043000 Sobic001G043000 Sobic009G016000--Sobic001G043000 Sobic007G121300 Sobic007G121300 Sobic009G016000--Sobic007G121300 Sobic003G428600 Sobic003G428600 Sobic009G016000--Sobic003G428600 Sobic001G331600 Sobic001G331600 Sobic009G016000--Sobic001G331600 Sobic010G104700 Sobic010G104700 Sobic009G016000--Sobic010G104700 Sobic001G443100 Sobic001G443100 Sobic002G041100--Sobic001G443100 Sobic006G230100 Sobic006G230100 Sobic002G041100--Sobic006G230100 Sobic002G082000 Sobic002G082000 Sobic002G041100--Sobic002G082000 Sobic001G395900 Sobic001G395900 Sobic002G041100--Sobic001G395900 Sobic004G299500 Sobic004G299500 Sobic002G041100--Sobic004G299500 Sobic005G097900 Sobic005G097900 Sobic002G041100--Sobic005G097900 Sobic007G193200 Sobic007G193200 Sobic002G041100--Sobic007G193200 Sobic007G015000 Sobic007G015000 Sobic002G041100--Sobic007G015000 Sobic002G041100--Sobic001G353200 Sobic007G211900 Sobic007G211900 Sobic001G442300--Sobic007G211900 Sobic001G027300 Sobic001G027300 Sobic001G442300--Sobic001G027300 Sobic010G185200 Sobic010G185200 Sobic001G442300--Sobic010G185200 Sobic003G076900 Sobic003G076900 Sobic001G442300--Sobic003G076900 Sobic001G442300--Sobic002G041100 Sobic001G454900 Sobic001G454900 Sobic001G442300--Sobic001G454900 Sobic006G015300 Sobic006G015300 Sobic001G442300--Sobic006G015300 Sobic007G177400 Sobic007G177400 Sobic001G442300--Sobic007G177400 Sobic005G105700 Sobic005G105700 Sobic001G442300--Sobic005G105700
Octagon: transcription factors


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