Gene annotation
Transcriptome id Sobic.001G027300.1
Synonym Sb01g002590
Functional annotation haloacid dehalogenase-like hydrolase family protein, putative, expressed
UniProt C5WU25
Pfam PF13419
Panther DB PTHR12725 PTHR12725:SF49
NCBI CDD KOG3109; Haloacid dehalogenase-like hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62040 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os03g61829.1 : haloacid dehalogenase-like hydrolase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a008893
Brachypodium -
Barley -
Wheat TraesCS4A02G359100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G442300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
2 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.006G015300 expressed protein -
4 Sobic.005G105700 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
5 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
6 Sobic.005G177100 glycosyl hydrolase, putative, expressed -
7 Sobic.005G162400 GATA transcription factor 25, putative, expressed -
8 Sobic.010G087900 similar to Aquaporin PIP1-6(PubMedID : 29862293)@-(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
9 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
10 Sobic.003G317900 lysM domain containing protein, putative -
11 Sobic.003G419200 xylanase inhibitor, putative, expressed -
12 Sobic.005G220300 OsWAK123 - OsWAK receptor-like protein kinase, expressed -
13 Sobic.004G002901 - K02940: RP-L9e, large subunit ribosomal protein L9e
14 Sobic.005G060200 cytochrome P450, putative, expressed -
15 Sobic.004G346300 expressed protein -
16 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
17 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.002G377600 patatin, putative, expressed -
19 Sobic.001G259100 "up-regulated under drought stress, mapped into a stay green mQTL (QSTG meta2.1)"(PubMedID : 24655390)@SPX domain containing protein, putative, expressed -
20 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic001G027300 Sobic001G027300 Sobic001G442300 Sobic001G442300 Sobic001G027300--Sobic001G442300 Sobic010G245400 Sobic010G245400 Sobic001G027300--Sobic010G245400 Sobic006G015300 Sobic006G015300 Sobic001G027300--Sobic006G015300 Sobic005G105700 Sobic005G105700 Sobic001G027300--Sobic005G105700 Sobic001G231800 Sobic001G231800 Sobic001G027300--Sobic001G231800 Sobic005G177100 Sobic005G177100 Sobic001G027300--Sobic005G177100 Sobic005G162400 Sobic005G162400 Sobic001G027300--Sobic005G162400 Sobic010G087900 Sobic010G087900 Sobic001G027300--Sobic010G087900 Sobic007G177400 Sobic007G177400 Sobic001G027300--Sobic007G177400 Sobic007G211900 Sobic007G211900 Sobic001G442300--Sobic007G211900 Sobic001G442300--Sobic001G027300 Sobic010G185200 Sobic010G185200 Sobic001G442300--Sobic010G185200 Sobic003G076900 Sobic003G076900 Sobic001G442300--Sobic003G076900 Sobic002G041100 Sobic002G041100 Sobic001G442300--Sobic002G041100 Sobic001G454900 Sobic001G454900 Sobic001G442300--Sobic001G454900 Sobic001G442300--Sobic006G015300 Sobic001G442300--Sobic007G177400 Sobic001G442300--Sobic005G105700 Sobic010G245400--Sobic001G231800 Sobic001G301000 Sobic001G301000 Sobic010G245400--Sobic001G301000 Sobic005G216400 Sobic005G216400 Sobic010G245400--Sobic005G216400 Sobic010G268700 Sobic010G268700 Sobic010G245400--Sobic010G268700 Sobic005G119900 Sobic005G119900 Sobic010G245400--Sobic005G119900 Sobic005G060200 Sobic005G060200 Sobic010G245400--Sobic005G060200 Sobic007G212000 Sobic007G212000 Sobic010G245400--Sobic007G212000 Sobic003G357700 Sobic003G357700 Sobic010G245400--Sobic003G357700 Sobic008G010500 Sobic008G010500 Sobic010G245400--Sobic008G010500 Sobic006G015300--Sobic005G105700 Sobic006G015300--Sobic005G162400 Sobic006G015300--Sobic007G177400 Sobic002G178200 Sobic002G178200 Sobic006G015300--Sobic002G178200 Sobic005G202800 Sobic005G202800 Sobic006G015300--Sobic005G202800 Sobic004G002901 Sobic004G002901 Sobic006G015300--Sobic004G002901 Sobic005G220300 Sobic005G220300 Sobic006G015300--Sobic005G220300 Sobic002G178101 Sobic002G178101 Sobic006G015300--Sobic002G178101 Sobic003G443700 Sobic003G443700 Sobic006G015300--Sobic003G443700 Sobic005G105700--Sobic007G177400 Sobic005G105700--Sobic006G015300 Sobic005G105700--Sobic004G002901 Sobic003G023600 Sobic003G023600 Sobic005G105700--Sobic003G023600 Sobic005G105700--Sobic005G202800 Sobic004G346300 Sobic004G346300 Sobic005G105700--Sobic004G346300 Sobic003G419200 Sobic003G419200 Sobic005G105700--Sobic003G419200 Sobic005G105700--Sobic010G245400 Sobic005G105700--Sobic005G162400 Sobic001G231800--Sobic001G301000 Sobic001G231800--Sobic008G010500 Sobic001G231800--Sobic010G245400 Sobic001G231800--Sobic005G119900 Sobic003G441700 Sobic003G441700 Sobic001G231800--Sobic003G441700 Sobic004G121600 Sobic004G121600 Sobic001G231800--Sobic004G121600 Sobic003G053200 Sobic003G053200 Sobic001G231800--Sobic003G053200 Sobic001G231800--Sobic010G268700 Sobic001G231800--Sobic003G357700 Sobic005G206000 Sobic005G206000 Sobic005G177100--Sobic005G206000 Sobic005G177100--Sobic007G177400 Sobic007G064500 Sobic007G064500 Sobic005G177100--Sobic007G064500 Sobic005G177100--Sobic008G010500 Sobic005G177100--Sobic001G231800 Sobic005G177100--Sobic004G346300 Sobic005G177100--Sobic005G162400 Sobic002G366200 Sobic002G366200 Sobic005G177100--Sobic002G366200 Sobic005G177100--Sobic010G245400 Sobic005G162400--Sobic005G220300 Sobic005G162400--Sobic002G178101 Sobic005G162400--Sobic003G443700 Sobic007G042600 Sobic007G042600 Sobic005G162400--Sobic007G042600 Sobic005G162400--Sobic006G015300 Sobic005G162400--Sobic004G346300 Sobic002G178000 Sobic002G178000 Sobic005G162400--Sobic002G178000 Sobic005G162400--Sobic007G177400 Sobic005G162400--Sobic005G216400 Sobic001G539200 Sobic001G539200 Sobic010G087900--Sobic001G539200 Sobic003G206400 Sobic003G206400 Sobic010G087900--Sobic003G206400 Sobic008G020000 Sobic008G020000 Sobic010G087900--Sobic008G020000 Sobic010G087900--Sobic003G053200 Sobic002G063600 Sobic002G063600 Sobic010G087900--Sobic002G063600 Sobic003G317900 Sobic003G317900 Sobic010G087900--Sobic003G317900 Sobic003G095100 Sobic003G095100 Sobic010G087900--Sobic003G095100 Sobic004G029400 Sobic004G029400 Sobic010G087900--Sobic004G029400 Sobic010G031700 Sobic010G031700 Sobic010G087900--Sobic010G031700 Sobic007G177400--Sobic003G357700 Sobic007G177400--Sobic002G366200 Sobic007G177400--Sobic004G346300 Sobic007G177400--Sobic003G443700 Sobic007G177400--Sobic007G064500 Sobic002G028632 Sobic002G028632 Sobic007G177400--Sobic002G028632 Sobic007G177400--Sobic005G216400 Sobic007G177400--Sobic003G023600 Sobic002G025500 Sobic002G025500 Sobic007G177400--Sobic002G025500
Octagon: transcription factors


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