Gene annotation
Transcriptome id Sobic.010G087900.1
Synonym SbPIP1;6;plasma membrane intrinsic protein/aquaporin, PIP1E,PIP aquaporin, Sb10g007610, PIP1;6, PIP1, 4, TMP-C
Functional annotation similar to Aquaporin PIP1-6 (PubMedID : 29862293)
- (PubMedID : 24879770)
Up-regulated by osmotic stress. (PubMedID : 24879770)
aquaporin protein, putative, expressed
UniProt C6JSE9 , C5Z6X2
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF90
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09872; aquaporin PIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT4G00430 : plasma membrane intrinsic protein 1;4
RAP-DB (Rice) LOC_Os02g44630.2 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a021083 , Zm00025a021439 , Zm00025a045837 , Zm00025a032250 , Zm00025a049510 , Zm00025a032042 , Zm00025a010237 , Zm00025a049307 , Zm00025a032750 , Zm00025a010642 , Zm00025a013555 , Zm00025a013554
Brachypodium KQJ84016 , KQJ83644 , KQK01461 , KQK01462 , KQK00428 , KQK00718 , KQK16443 , KQK16441
Barley HORVU2Hr1G010990.4 , HORVU2Hr1G010990.2 , HORVU2Hr1G010990.1 , HORVU2Hr1G096360.6 , HORVU2Hr1G096360.7 , HORVU2Hr1G096360.4 , HORVU2Hr1G096360.5 , HORVU2Hr1G096360.2 , HORVU2Hr1G096360.3 , HORVU2Hr1G096360.1 , HORVU2Hr1G096360.8 , HORVU2Hr1G096360.9 , HORVU6Hr1G092970.4 , HORVU6Hr1G058930.9 , HORVU6Hr1G058930.8 , HORVU6Hr1G058930.4 , HORVU6Hr1G058930.1 , HORVU5Hr1G055200.7 , HORVU5Hr1G055200.6 , HORVU5Hr1G055200.5 , HORVU5Hr1G055200.4 , HORVU5Hr1G055200.3 , HORVU5Hr1G055200.2 , HORVU5Hr1G055200.1 , HORVU5Hr1G055200.8 , HORVU2Hr1G096360.14 , HORVU2Hr1G096360.15 , HORVU2Hr1G096360.16 , HORVU2Hr1G096360.10 , HORVU2Hr1G096360.11 , HORVU2Hr1G096360.12 , HORVU2Hr1G096360.13 , HORVU6Hr1G064140.5 , HORVU6Hr1G064140.4 , HORVU6Hr1G064140.3 , HORVU6Hr1G064140.2 , HORVU6Hr1G064140.1 , HORVU6Hr1G092960.12 , HORVU6Hr1G092960.13 , HORVU6Hr1G092960.10 , HORVU6Hr1G058930.20 , HORVU6Hr1G058930.21 , HORVU6Hr1G058930.19 , HORVU6Hr1G058930.18 , HORVU6Hr1G058930.11 , HORVU6Hr1G058930.10 , HORVU6Hr1G058930.13 , HORVU6Hr1G058930.12 , HORVU6Hr1G058930.15 , HORVU6Hr1G058930.14 , HORVU6Hr1G058930.17 , HORVU6Hr1G058930.16 , HORVU6Hr1G092960.4 , HORVU6Hr1G092960.5 , HORVU6Hr1G092960.6 , HORVU6Hr1G092960.7 , HORVU6Hr1G092960.1 , HORVU6Hr1G092960.9 , HORVU6Hr1G092970.3 , HORVU6Hr1G092970.2
Wheat TraesCS5D02G185400 , TraesCS6B02G398000 , TraesCS2A02G198500 , TraesCS6B02G259000 , TraesCS2B02G605900 , TraesCS2D02G206300 , TraesCS6B02G279200 , TraesCS6D02G389400 , TraesCS6D02G227500 , TraesCS6D02G212900 , TraesCS5B02G178700 , TraesCS6A02G405700 , TraesCS6B02G450000 , TraesCS2D02G404800 , TraesCS2B02G425600 , TraesCS5A02G181000 , TraesCS2D02G376000 , TraesCS2D02G376000 , TraesCS2D02G404800 , TraesCS6A02G222100 , TraesCS6B02G450200 , TraesCS6A02G245100 , TraesCS2B02G225900 , TraesCS2A02G407700 , TraesCS2A02G407700 , TraesCS2B02G077700 , TraesCS2A02G065700 , TraesCS6D02G389500 , TraesCS2D02G063900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G539200 expressed protein -
2 Sobic.003G206400 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
3 Sobic.008G020000 - -
4 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.002G063600 disease resistance protein RPM1, putative -
6 Sobic.003G317900 lysM domain containing protein, putative -
7 Sobic.003G095100 glycosyltransferase protein, putative, expressed -
8 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
9 Sobic.010G031700 thaumatin, putative, expressed -
10 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
11 Sobic.002G118801 - -
12 Sobic.006G085700 OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
13 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
14 Sobic.002G233200 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.001G271300 expressed protein -
16 Sobic.008G109400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
17 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
18 Sobic.007G073100 amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
19 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
20 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic010G087900 Sobic010G087900 Sobic001G539200 Sobic001G539200 Sobic010G087900--Sobic001G539200 Sobic003G206400 Sobic003G206400 Sobic010G087900--Sobic003G206400 Sobic008G020000 Sobic008G020000 Sobic010G087900--Sobic008G020000 Sobic003G053200 Sobic003G053200 Sobic010G087900--Sobic003G053200 Sobic002G063600 Sobic002G063600 Sobic010G087900--Sobic002G063600 Sobic003G317900 Sobic003G317900 Sobic010G087900--Sobic003G317900 Sobic003G095100 Sobic003G095100 Sobic010G087900--Sobic003G095100 Sobic004G029400 Sobic004G029400 Sobic010G087900--Sobic004G029400 Sobic010G031700 Sobic010G031700 Sobic010G087900--Sobic010G031700 Sobic002G118801 Sobic002G118801 Sobic001G539200--Sobic002G118801 Sobic005G119900 Sobic005G119900 Sobic001G539200--Sobic005G119900 Sobic001G539200--Sobic010G087900 Sobic005G097400 Sobic005G097400 Sobic001G539200--Sobic005G097400 Sobic001G539200--Sobic003G053200 Sobic001G539200--Sobic004G029400 Sobic003G441800 Sobic003G441800 Sobic001G539200--Sobic003G441800 Sobic008G109400 Sobic008G109400 Sobic001G539200--Sobic008G109400 Sobic003G441700 Sobic003G441700 Sobic001G539200--Sobic003G441700 Sobic003G206400--Sobic002G063600 Sobic003G206400--Sobic010G087900 Sobic003G206400--Sobic002G118801 Sobic003G206400--Sobic001G539200 Sobic006G018100 Sobic006G018100 Sobic003G206400--Sobic006G018100 Sobic003G206400--Sobic008G020000 Sobic001G232700 Sobic001G232700 Sobic003G206400--Sobic001G232700 Sobic009G065800 Sobic009G065800 Sobic003G206400--Sobic009G065800 Sobic003G206400--Sobic003G317900 Sobic008G020000--Sobic003G095100 Sobic008G020000--Sobic003G441800 Sobic007G073100 Sobic007G073100 Sobic008G020000--Sobic007G073100 Sobic006G205700 Sobic006G205700 Sobic008G020000--Sobic006G205700 Sobic003G167300 Sobic003G167300 Sobic008G020000--Sobic003G167300 Sobic008G034900 Sobic008G034900 Sobic008G020000--Sobic008G034900 Sobic008G020000--Sobic002G118801 Sobic008G020000--Sobic004G029400 Sobic008G020000--Sobic003G053200 Sobic003G053200--Sobic003G441800 Sobic003G053200--Sobic003G441700 Sobic001G301000 Sobic001G301000 Sobic003G053200--Sobic001G301000 Sobic004G121600 Sobic004G121600 Sobic003G053200--Sobic004G121600 Sobic003G053200--Sobic010G031700 Sobic003G053200--Sobic005G119900 Sobic003G053200--Sobic004G029400 Sobic001G231800 Sobic001G231800 Sobic003G053200--Sobic001G231800 Sobic007G037600 Sobic007G037600 Sobic003G053200--Sobic007G037600 Sobic002G063600--Sobic003G206400 Sobic002G063600--Sobic002G118801 Sobic002G377600 Sobic002G377600 Sobic002G063600--Sobic002G377600 Sobic002G063600--Sobic001G539200 Sobic006G079300 Sobic006G079300 Sobic002G063600--Sobic006G079300 Sobic002G063600--Sobic010G087900 Sobic010G128400 Sobic010G128400 Sobic002G063600--Sobic010G128400 Sobic002G063600--Sobic010G031700 Sobic006G277700 Sobic006G277700 Sobic002G063600--Sobic006G277700 Sobic003G317900--Sobic010G087900 Sobic003G317900--Sobic001G539200 Sobic003G317900--Sobic003G206400 Sobic003G317900--Sobic002G063600 Sobic003G317900--Sobic002G377600 Sobic003G317900--Sobic001G232700 Sobic010G147200 Sobic010G147200 Sobic003G317900--Sobic010G147200 Sobic003G317900--Sobic002G118801 Sobic006G048100 Sobic006G048100 Sobic003G317900--Sobic006G048100 Sobic003G095100--Sobic006G205700 Sobic003G095100--Sobic003G441800 Sobic003G095100--Sobic008G020000 Sobic003G095100--Sobic003G167300 Sobic003G282300 Sobic003G282300 Sobic003G095100--Sobic003G282300 Sobic003G441601 Sobic003G441601 Sobic003G095100--Sobic003G441601 Sobic007G090600 Sobic007G090600 Sobic003G095100--Sobic007G090600 Sobic004G106100 Sobic004G106100 Sobic003G095100--Sobic004G106100 Sobic005G046400 Sobic005G046400 Sobic003G095100--Sobic005G046400 Sobic004G029400--Sobic003G441800 Sobic004G029400--Sobic003G053200 Sobic004G029400--Sobic010G031700 Sobic004G029400--Sobic004G121600 Sobic004G029400--Sobic007G037600 Sobic004G029400--Sobic001G539200 Sobic009G181600 Sobic009G181600 Sobic004G029400--Sobic009G181600 Sobic004G029400--Sobic003G282300 Sobic004G029400--Sobic005G119900 Sobic010G031700--Sobic003G053200 Sobic010G031700--Sobic007G037600 Sobic010G031700--Sobic003G441800 Sobic010G031700--Sobic004G106100 Sobic010G031700--Sobic004G029400 Sobic006G003100 Sobic006G003100 Sobic010G031700--Sobic006G003100 Sobic010G031700--Sobic006G205700 Sobic002G233200 Sobic002G233200 Sobic010G031700--Sobic002G233200 Sobic003G353200 Sobic003G353200 Sobic010G031700--Sobic003G353200
Octagon: transcription factors


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