Gene annotation
Transcriptome id Sobic.002G018300.1,Sobic.002G018300.3
Synonym Sb02g001730
Functional annotation expressed protein
UniProt C5X832
Pfam PF08224
Panther DB PTHR33377 PTHR33377:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g18570.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G142800 amino acid transporter, putative, expressed -
2 Sobic.004G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
3 Sobic.001G269900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
5 Sobic.010G165500 ABC-2 type transporter, putative, expressed -
6 Sobic.005G050300 leucine-rich repeat receptor-like protein kinase 1, putative, expressed -
7 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
8 Sobic.007G054500 ABC-2 type transporter domain containing protein, expressed -
9 Sobic.010G165200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.005G196300 transporter family protein, putative, expressed -
11 Sobic.009G176800 DUF567 domain containing protein, putative, expressed -
12 Sobic.003G344200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
13 Sobic.004G283700 OsFBX58 - F-box domain containing protein, expressed -
14 Sobic.006G078100 FAD binding domain containing protein, expressed -
15 Sobic.001G132800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.21 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.002G277800 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.001G357300 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
18 Sobic.006G175900 acyl-CoA thioesterase 2, putative, expressed -
19 Sobic.009G003000 methionine S-methyltransferase, putative, expressed K08247: methionine S-methyltransferase
20 Sobic.006G075600 WD-40 repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic002G018300 Sobic002G018300 Sobic009G142800 Sobic009G142800 Sobic002G018300--Sobic009G142800 Sobic004G238100 Sobic004G238100 Sobic002G018300--Sobic004G238100 Sobic001G269900 Sobic001G269900 Sobic002G018300--Sobic001G269900 Sobic006G191100 Sobic006G191100 Sobic002G018300--Sobic006G191100 Sobic010G165500 Sobic010G165500 Sobic002G018300--Sobic010G165500 Sobic005G050300 Sobic005G050300 Sobic002G018300--Sobic005G050300 Sobic006G271500 Sobic006G271500 Sobic002G018300--Sobic006G271500 Sobic007G054500 Sobic007G054500 Sobic002G018300--Sobic007G054500 Sobic010G165200 Sobic010G165200 Sobic002G018300--Sobic010G165200 Sobic009G016633 Sobic009G016633 Sobic009G142800--Sobic009G016633 Sobic003G344200 Sobic003G344200 Sobic009G142800--Sobic003G344200 Sobic006G206700 Sobic006G206700 Sobic009G142800--Sobic006G206700 Sobic002G198500 Sobic002G198500 Sobic009G142800--Sobic002G198500 Sobic010G185200 Sobic010G185200 Sobic009G142800--Sobic010G185200 Sobic006G086700 Sobic006G086700 Sobic009G142800--Sobic006G086700 Sobic001G442500 Sobic001G442500 Sobic009G142800--Sobic001G442500 Sobic010G115500 Sobic010G115500 Sobic009G142800--Sobic010G115500 Sobic001G128100 Sobic001G128100 Sobic009G142800--Sobic001G128100 Sobic001G142800 Sobic001G142800 Sobic004G238100--Sobic001G142800 Sobic005G091300 Sobic005G091300 Sobic004G238100--Sobic005G091300 Sobic009G003000 Sobic009G003000 Sobic004G238100--Sobic009G003000 Sobic004G238100--Sobic006G271500 Sobic008G119800 Sobic008G119800 Sobic004G238100--Sobic008G119800 Sobic009G246300 Sobic009G246300 Sobic004G238100--Sobic009G246300 Sobic006G259700 Sobic006G259700 Sobic004G238100--Sobic006G259700 Sobic004G113100 Sobic004G113100 Sobic004G238100--Sobic004G113100 Sobic009G176800 Sobic009G176800 Sobic004G238100--Sobic009G176800 Sobic001G006201 Sobic001G006201 Sobic001G269900--Sobic001G006201 Sobic005G196300 Sobic005G196300 Sobic001G269900--Sobic005G196300 Sobic001G235800 Sobic001G235800 Sobic001G269900--Sobic001G235800 Sobic010G071400 Sobic010G071400 Sobic001G269900--Sobic010G071400 Sobic003G119500 Sobic003G119500 Sobic001G269900--Sobic003G119500 Sobic003G429200 Sobic003G429200 Sobic001G269900--Sobic003G429200 Sobic010G148800 Sobic010G148800 Sobic001G269900--Sobic010G148800 Sobic003G227700 Sobic003G227700 Sobic001G269900--Sobic003G227700 Sobic003G327900 Sobic003G327900 Sobic001G269900--Sobic003G327900 Sobic005G195600 Sobic005G195600 Sobic006G191100--Sobic005G195600 Sobic006G087900 Sobic006G087900 Sobic006G191100--Sobic006G087900 Sobic006G076201 Sobic006G076201 Sobic006G191100--Sobic006G076201 Sobic002G362900 Sobic002G362900 Sobic006G191100--Sobic002G362900 Sobic010G069900 Sobic010G069900 Sobic006G191100--Sobic010G069900 Sobic003G016600 Sobic003G016600 Sobic006G191100--Sobic003G016600 Sobic006G191100--Sobic003G227700 Sobic001G113700 Sobic001G113700 Sobic006G191100--Sobic001G113700 Sobic007G221100 Sobic007G221100 Sobic006G191100--Sobic007G221100 Sobic006G099700 Sobic006G099700 Sobic010G165500--Sobic006G099700 Sobic007G088000 Sobic007G088000 Sobic010G165500--Sobic007G088000 Sobic010G083500 Sobic010G083500 Sobic010G165500--Sobic010G083500 Sobic008G077600 Sobic008G077600 Sobic010G165500--Sobic008G077600 Sobic010G232100 Sobic010G232100 Sobic010G165500--Sobic010G232100 Sobic008G025500 Sobic008G025500 Sobic010G165500--Sobic008G025500 Sobic009G129800 Sobic009G129800 Sobic010G165500--Sobic009G129800 Sobic001G357300 Sobic001G357300 Sobic010G165500--Sobic001G357300 Sobic009G180500 Sobic009G180500 Sobic010G165500--Sobic009G180500 Sobic005G050300--Sobic009G003000 Sobic005G050300--Sobic001G142800 Sobic005G050300--Sobic004G238100 Sobic008G150100 Sobic008G150100 Sobic005G050300--Sobic008G150100 Sobic002G041200 Sobic002G041200 Sobic005G050300--Sobic002G041200 Sobic005G050300--Sobic002G018300 Sobic009G016000 Sobic009G016000 Sobic005G050300--Sobic009G016000 Sobic002G041100 Sobic002G041100 Sobic005G050300--Sobic002G041100 Sobic001G442300 Sobic001G442300 Sobic005G050300--Sobic001G442300 Sobic002G230600 Sobic002G230600 Sobic006G271500--Sobic002G230600 Sobic002G128900 Sobic002G128900 Sobic006G271500--Sobic002G128900 Sobic006G271500--Sobic004G238100 Sobic009G155300 Sobic009G155300 Sobic006G271500--Sobic009G155300 Sobic004G121300 Sobic004G121300 Sobic006G271500--Sobic004G121300 Sobic001G261545 Sobic001G261545 Sobic006G271500--Sobic001G261545 Sobic010G050800 Sobic010G050800 Sobic006G271500--Sobic010G050800 Sobic001G085600 Sobic001G085600 Sobic006G271500--Sobic001G085600 Sobic008G037800 Sobic008G037800 Sobic006G271500--Sobic008G037800 Sobic001G132800 Sobic001G132800 Sobic007G054500--Sobic001G132800 Sobic005G110490 Sobic005G110490 Sobic007G054500--Sobic005G110490 Sobic006G156600 Sobic006G156600 Sobic007G054500--Sobic006G156600 Sobic006G075600 Sobic006G075600 Sobic007G054500--Sobic006G075600 Sobic007G009500 Sobic007G009500 Sobic007G054500--Sobic007G009500 Sobic001G108350 Sobic001G108350 Sobic007G054500--Sobic001G108350 Sobic007G137300 Sobic007G137300 Sobic007G054500--Sobic007G137300 Sobic010G035900 Sobic010G035900 Sobic007G054500--Sobic010G035900 Sobic004G257800 Sobic004G257800 Sobic007G054500--Sobic004G257800 Sobic001G127800 Sobic001G127800 Sobic010G165200--Sobic001G127800 Sobic007G152800 Sobic007G152800 Sobic010G165200--Sobic007G152800 Sobic009G072200 Sobic009G072200 Sobic010G165200--Sobic009G072200 Sobic005G121200 Sobic005G121200 Sobic010G165200--Sobic005G121200 Sobic004G333100 Sobic004G333100 Sobic010G165200--Sobic004G333100 Sobic010G165200--Sobic001G132800 Sobic010G165200--Sobic007G054500 Sobic001G048900 Sobic001G048900 Sobic010G165200--Sobic001G048900 Sobic006G064800 Sobic006G064800 Sobic010G165200--Sobic006G064800
Octagon: transcription factors


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