Gene annotation
Transcriptome id Sobic.009G003000.1,Sobic.009G003000.2
Synonym Sb09g000490, MMT
Functional annotation methionine S-methyltransferase, putative, expressed
UniProt C5YXZ7 , C5YXZ8
Pfam PF12847 PF00155
Panther DB PTHR11751 PTHR11751:SF133
NCBI CDD -
KEGG Orthology K08247; methionine S-methyltransferase
Gene Ontology GO:0009058; biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G49810 : methionine S-methyltransferase
RAP-DB (Rice) LOC_Os05g01470.1,LOC_Os05g01470.2 : methionine S-methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a038292
Brachypodium KQK08084 , PNT69742 , KQK08124 , KQK08123 , KQK12958
Barley HORVU7Hr1G018470.25 , HORVU1Hr1G002150.9 , HORVU1Hr1G002150.8 , HORVU3Hr1G104600.8 , HORVU1Hr1G002150.3 , HORVU3Hr1G104600.1 , HORVU3Hr1G104600.2 , HORVU3Hr1G104600.3 , HORVU3Hr1G104600.4 , HORVU3Hr1G104600.5 , HORVU3Hr1G104600.6 , HORVU3Hr1G104600.7 , HORVU1Hr1G002150.7 , HORVU1Hr1G002150.6 , HORVU1Hr1G002150.5 , HORVU1Hr1G002150.4 , HORVU7Hr1G008250.18 , HORVU7Hr1G008250.19 , HORVU7Hr1G008250.16 , HORVU7Hr1G008250.17 , HORVU7Hr1G008250.14 , HORVU7Hr1G008250.15 , HORVU7Hr1G008250.12 , HORVU7Hr1G008250.13 , HORVU7Hr1G008250.10 , HORVU7Hr1G008250.11 , HORVU7Hr1G008250.27 , HORVU7Hr1G008250.26 , HORVU7Hr1G008250.25 , HORVU7Hr1G008250.24 , HORVU7Hr1G008250.23 , HORVU7Hr1G008250.22 , HORVU7Hr1G008250.21 , HORVU7Hr1G008250.20 , HORVU7Hr1G008250.29 , HORVU7Hr1G008250.28 , HORVU1Hr1G002150.2 , HORVU1Hr1G002150.1 , HORVU3Hr1G104600.12 , HORVU3Hr1G104600.13 , HORVU3Hr1G104600.11 , HORVU3Hr1G104600.16 , HORVU3Hr1G104600.17 , HORVU3Hr1G104600.14 , HORVU3Hr1G104600.15 , HORVU3Hr1G104600.19 , HORVU7Hr1G008250.30 , HORVU7Hr1G008250.31 , HORVU7Hr1G008250.32 , HORVU7Hr1G008250.33 , HORVU7Hr1G018470.73 , HORVU7Hr1G018470.72 , HORVU7Hr1G018470.70 , HORVU7Hr1G018470.77 , HORVU7Hr1G018470.76 , HORVU7Hr1G018470.75 , HORVU7Hr1G018470.74 , HORVU3Hr1G104600.23 , HORVU3Hr1G104600.22 , HORVU3Hr1G104600.21 , HORVU3Hr1G104600.20 , HORVU3Hr1G104600.27 , HORVU3Hr1G104600.26 , HORVU3Hr1G104600.25 , HORVU3Hr1G104600.24 , HORVU1Hr1G002150.11 , HORVU7Hr1G018470.69 , HORVU1Hr1G002150.13 , HORVU1Hr1G002150.12 , HORVU1Hr1G002150.10 , HORVU1Hr1G002150.16 , HORVU1Hr1G002150.15 , HORVU1Hr1G002150.14 , HORVU3Hr1G104600.9 , HORVU7Hr1G008250.8 , HORVU7Hr1G008250.9 , HORVU7Hr1G008250.4 , HORVU7Hr1G008250.5 , HORVU7Hr1G008250.6 , HORVU7Hr1G008250.7 , HORVU7Hr1G008250.1 , HORVU7Hr1G008250.2 , HORVU7Hr1G008250.3
Wheat TraesCS1A02G013800 , TraesCS1A02G013800 , TraesCS1A02G013800 , TraesCS1A02G013800 , TraesCS7A02G046700 , TraesCS1D02G011700 , TraesCS4D02G076600 , TraesCS1B02G017800 , TraesCS1B02G017800 , TraesCS1B02G017800 , TraesCS5B02G439400 , TraesCS5B02G439400 , TraesCS1D02G011700 , TraesCS1D02G011700 , TraesCS5A02G436300 , TraesCS5A02G436300 , TraesCS4A02G394100 , TraesCS3B02G288400 , TraesCS4A02G237000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G041200 similar to LOC Os02g20360: tyrosine aminotransferase(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@similar to LOC.Os02g20360:tyrosine aminotranferase(PubMedID : 24655390)@tyrosine aminotransferase, putative, expressed K00815: tyrosine aminotransferase
2 Sobic.001G142800 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
3 Sobic.006G259700 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
4 Sobic.004G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
5 Sobic.010G225701 - -
6 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
7 Sobic.006G024600 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
8 Sobic.009G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
9 Sobic.001G261545 - K01669: deoxyribodipyrimidine photo-lyase
10 Sobic.004G125100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
11 Sobic.003G355200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
12 Sobic.002G252300 expressed protein -
13 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
14 Sobic.001G292700 crcB-like protein, expressed -
15 Sobic.005G050300 leucine-rich repeat receptor-like protein kinase 1, putative, expressed -
16 Sobic.009G176800 DUF567 domain containing protein, putative, expressed -
17 Sobic.002G230700 - -
18 Sobic.002G383800 GTP-binding protein, putative, expressed K06944: uncharacterized protein
19 Sobic.001G221800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
20 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -


Gene co-expression network
sample Sobic009G003000 Sobic009G003000 Sobic002G041200 Sobic002G041200 Sobic009G003000--Sobic002G041200 Sobic001G142800 Sobic001G142800 Sobic009G003000--Sobic001G142800 Sobic006G259700 Sobic006G259700 Sobic009G003000--Sobic006G259700 Sobic004G238100 Sobic004G238100 Sobic009G003000--Sobic004G238100 Sobic010G225701 Sobic010G225701 Sobic009G003000--Sobic010G225701 Sobic006G271500 Sobic006G271500 Sobic009G003000--Sobic006G271500 Sobic006G024600 Sobic006G024600 Sobic009G003000--Sobic006G024600 Sobic009G246300 Sobic009G246300 Sobic009G003000--Sobic009G246300 Sobic001G261545 Sobic001G261545 Sobic009G003000--Sobic001G261545 Sobic002G041200--Sobic009G003000 Sobic002G041200--Sobic001G142800 Sobic002G041200--Sobic006G259700 Sobic002G041100 Sobic002G041100 Sobic002G041200--Sobic002G041100 Sobic007G021100 Sobic007G021100 Sobic002G041200--Sobic007G021100 Sobic005G110541 Sobic005G110541 Sobic002G041200--Sobic005G110541 Sobic002G041200--Sobic004G238100 Sobic005G100800 Sobic005G100800 Sobic002G041200--Sobic005G100800 Sobic001G353200 Sobic001G353200 Sobic002G041200--Sobic001G353200 Sobic001G142800--Sobic002G041200 Sobic001G142800--Sobic004G238100 Sobic001G142800--Sobic009G003000 Sobic001G142800--Sobic002G041100 Sobic001G142800--Sobic006G259700 Sobic003G134600 Sobic003G134600 Sobic001G142800--Sobic003G134600 Sobic009G176800 Sobic009G176800 Sobic001G142800--Sobic009G176800 Sobic001G142800--Sobic006G024600 Sobic001G142800--Sobic010G225701 Sobic006G259700--Sobic002G041200 Sobic006G259700--Sobic009G003000 Sobic008G150100 Sobic008G150100 Sobic006G259700--Sobic008G150100 Sobic006G259700--Sobic001G142800 Sobic006G259700--Sobic006G271500 Sobic009G139900 Sobic009G139900 Sobic006G259700--Sobic009G139900 Sobic001G243100 Sobic001G243100 Sobic006G259700--Sobic001G243100 Sobic010G115500 Sobic010G115500 Sobic006G259700--Sobic010G115500 Sobic001G203400 Sobic001G203400 Sobic006G259700--Sobic001G203400 Sobic004G238100--Sobic001G142800 Sobic005G091300 Sobic005G091300 Sobic004G238100--Sobic005G091300 Sobic004G238100--Sobic009G003000 Sobic004G238100--Sobic006G271500 Sobic008G119800 Sobic008G119800 Sobic004G238100--Sobic008G119800 Sobic004G238100--Sobic009G246300 Sobic004G238100--Sobic006G259700 Sobic004G113100 Sobic004G113100 Sobic004G238100--Sobic004G113100 Sobic004G238100--Sobic009G176800 Sobic007G006200 Sobic007G006200 Sobic010G225701--Sobic007G006200 Sobic002G162400 Sobic002G162400 Sobic010G225701--Sobic002G162400 Sobic009G194500 Sobic009G194500 Sobic010G225701--Sobic009G194500 Sobic001G244600 Sobic001G244600 Sobic010G225701--Sobic001G244600 Sobic001G243200 Sobic001G243200 Sobic010G225701--Sobic001G243200 Sobic001G077300 Sobic001G077300 Sobic010G225701--Sobic001G077300 Sobic001G263100 Sobic001G263100 Sobic010G225701--Sobic001G263100 Sobic006G235300 Sobic006G235300 Sobic010G225701--Sobic006G235300 Sobic008G038500 Sobic008G038500 Sobic010G225701--Sobic008G038500 Sobic002G230600 Sobic002G230600 Sobic006G271500--Sobic002G230600 Sobic002G128900 Sobic002G128900 Sobic006G271500--Sobic002G128900 Sobic006G271500--Sobic004G238100 Sobic009G155300 Sobic009G155300 Sobic006G271500--Sobic009G155300 Sobic004G121300 Sobic004G121300 Sobic006G271500--Sobic004G121300 Sobic006G271500--Sobic001G261545 Sobic010G050800 Sobic010G050800 Sobic006G271500--Sobic010G050800 Sobic001G085600 Sobic001G085600 Sobic006G271500--Sobic001G085600 Sobic008G037800 Sobic008G037800 Sobic006G271500--Sobic008G037800 Sobic006G024600--Sobic010G225701 Sobic006G024600--Sobic007G006200 Sobic005G211600 Sobic005G211600 Sobic006G024600--Sobic005G211600 Sobic001G200000 Sobic001G200000 Sobic006G024600--Sobic001G200000 Sobic004G092350 Sobic004G092350 Sobic006G024600--Sobic004G092350 Sobic002G161400 Sobic002G161400 Sobic006G024600--Sobic002G161400 Sobic010G230500 Sobic010G230500 Sobic006G024600--Sobic010G230500 Sobic003G012400 Sobic003G012400 Sobic006G024600--Sobic003G012400 Sobic003G080300 Sobic003G080300 Sobic006G024600--Sobic003G080300 Sobic004G322700 Sobic004G322700 Sobic009G246300--Sobic004G322700 Sobic001G221800 Sobic001G221800 Sobic009G246300--Sobic001G221800 Sobic003G139500 Sobic003G139500 Sobic009G246300--Sobic003G139500 Sobic003G277600 Sobic003G277600 Sobic009G246300--Sobic003G277600 Sobic004G322600 Sobic004G322600 Sobic009G246300--Sobic004G322600 Sobic009G016000 Sobic009G016000 Sobic009G246300--Sobic009G016000 Sobic001G073300 Sobic001G073300 Sobic009G246300--Sobic001G073300 Sobic009G246300--Sobic001G244600 Sobic001G244700 Sobic001G244700 Sobic009G246300--Sobic001G244700 Sobic007G136200 Sobic007G136200 Sobic001G261545--Sobic007G136200 Sobic010G171600 Sobic010G171600 Sobic001G261545--Sobic010G171600 Sobic005G100600 Sobic005G100600 Sobic001G261545--Sobic005G100600 Sobic009G103000 Sobic009G103000 Sobic001G261545--Sobic009G103000 Sobic003G264800 Sobic003G264800 Sobic001G261545--Sobic003G264800 Sobic007G058001 Sobic007G058001 Sobic001G261545--Sobic007G058001 Sobic001G261545--Sobic001G085600 Sobic006G232600 Sobic006G232600 Sobic001G261545--Sobic006G232600 Sobic001G436400 Sobic001G436400 Sobic001G261545--Sobic001G436400
Octagon: transcription factors


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