Gene annotation
Transcriptome id Sobic.010G165500.4,Sobic.010G165500.3
Synonym PDR8, PEN3, ATPDR8, ABCG36, ATABCG36
Functional annotation ABC-2 type transporter, putative, expressed
UniProt A0A1W0VTH6
Pfam PF08370 PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF270
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G16340 : pleiotropic drug resistance 1
RAP-DB (Rice) LOC_Os06g36090.1 : ABC-2 type transporter, putative, expressed
MaizeGDB (Corn) Zm00025a051059 , Zm00025a042316 , Zm00025a027732
Brachypodium KQK18013 , KQK18012
Barley HORVU7Hr1G088630.10 , HORVU7Hr1G088630.15 , HORVU7Hr1G088630.16 , HORVU7Hr1G088630.8 , HORVU7Hr1G088630.9 , HORVU7Hr1G088630.2 , HORVU7Hr1G088630.3 , HORVU7Hr1G088630.1 , HORVU7Hr1G088630.6 , HORVU7Hr1G088630.7 , HORVU7Hr1G088630.4 , HORVU7Hr1G088630.5 , HORVU7Hr1G088600.19 , HORVU7Hr1G088600.18 , HORVU7Hr1G088600.13 , HORVU7Hr1G088600.11 , HORVU7Hr1G088600.10 , HORVU3Hr1G068750.4 , HORVU3Hr1G068750.3 , HORVU3Hr1G068750.2 , HORVU3Hr1G068750.1 , HORVU7Hr1G088630.11 , HORVU7Hr1G088630.12 , HORVU7Hr1G088630.13 , HORVU7Hr1G088630.14 , HORVU7Hr1G088600.9 , HORVU7Hr1G088600.8 , HORVU7Hr1G088600.3 , HORVU7Hr1G088600.2 , HORVU7Hr1G088600.1 , HORVU7Hr1G088600.7 , HORVU7Hr1G088600.6 , HORVU7Hr1G088600.5 , HORVU7Hr1G088600.4
Wheat TraesCS7B02G271500 , TraesCS7D02G366500 , TraesCS7D02G366500 , TraesCS7B02G271600 , TraesCS3A02G285100 , TraesCS7A02G356200 , TraesCS3B02G319000 , TraesCS7D02G366600 , TraesCS7A02G356100 , TraesCS7A02G356100 , TraesCS7A02G356100
Populus PNT16680 , PNS93191 , PNS93190 , PNS93192


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G099700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine hydrolase domain containing protein, expressed -
2 Sobic.007G088000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
3 Sobic.010G083500 pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed K17872: NDC1, demethylphylloquinone reductase
4 Sobic.008G077600 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
5 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
6 Sobic.008G025500 DUF567 domain containing protein, putative, expressed -
7 Sobic.009G129800 endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
8 Sobic.001G357300 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
9 Sobic.009G180500 Myb-like DNA-binding domain containing protein, putative, expressed -
10 Sobic.009G149400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
11 Sobic.004G318100 adenylate kinase, putative, expressed K13800: CMPK1, UMP-CMP kinase
12 Sobic.009G203100 expressed protein -
13 Sobic.002G291200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
14 Sobic.009G258100 early-responsive to dehydration protein-related, putative, expressed -
15 Sobic.010G277800 lysM domain containing protein, putative, expressed -
16 Sobic.001G040800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
17 Sobic.004G272700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
18 Sobic.009G240900 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
19 Sobic.001G143000 Phosphatase(PubMedID : 30367619)@BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
20 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A


Gene co-expression network
sample Sobic010G165500 Sobic010G165500 Sobic006G099700 Sobic006G099700 Sobic010G165500--Sobic006G099700 Sobic007G088000 Sobic007G088000 Sobic010G165500--Sobic007G088000 Sobic010G083500 Sobic010G083500 Sobic010G165500--Sobic010G083500 Sobic008G077600 Sobic008G077600 Sobic010G165500--Sobic008G077600 Sobic010G232100 Sobic010G232100 Sobic010G165500--Sobic010G232100 Sobic008G025500 Sobic008G025500 Sobic010G165500--Sobic008G025500 Sobic009G129800 Sobic009G129800 Sobic010G165500--Sobic009G129800 Sobic001G357300 Sobic001G357300 Sobic010G165500--Sobic001G357300 Sobic009G180500 Sobic009G180500 Sobic010G165500--Sobic009G180500 Sobic006G099700--Sobic008G025500 Sobic006G099700--Sobic007G088000 Sobic006G099700--Sobic010G232100 Sobic006G099700--Sobic010G165500 Sobic001G393500 Sobic001G393500 Sobic006G099700--Sobic001G393500 Sobic004G330700 Sobic004G330700 Sobic006G099700--Sobic004G330700 Sobic003G279300 Sobic003G279300 Sobic006G099700--Sobic003G279300 Sobic001G499300 Sobic001G499300 Sobic006G099700--Sobic001G499300 Sobic004G187900 Sobic004G187900 Sobic006G099700--Sobic004G187900 Sobic003G306100 Sobic003G306100 Sobic007G088000--Sobic003G306100 Sobic004G055200 Sobic004G055200 Sobic007G088000--Sobic004G055200 Sobic007G088000--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic007G088000--Sobic001G281400 Sobic009G141800 Sobic009G141800 Sobic007G088000--Sobic009G141800 Sobic001G040800 Sobic001G040800 Sobic007G088000--Sobic001G040800 Sobic001G459200 Sobic001G459200 Sobic007G088000--Sobic001G459200 Sobic007G088000--Sobic006G099700 Sobic007G088000--Sobic001G499300 Sobic010G083500--Sobic010G165500 Sobic006G123300 Sobic006G123300 Sobic010G083500--Sobic006G123300 Sobic010G050800 Sobic010G050800 Sobic010G083500--Sobic010G050800 Sobic010G083500--Sobic010G232100 Sobic010G083500--Sobic007G088000 Sobic010G277800 Sobic010G277800 Sobic010G083500--Sobic010G277800 Sobic004G272700 Sobic004G272700 Sobic010G083500--Sobic004G272700 Sobic009G185800 Sobic009G185800 Sobic010G083500--Sobic009G185800 Sobic010G083500--Sobic001G357300 Sobic008G077600--Sobic010G165500 Sobic008G077600--Sobic010G232100 Sobic009G258100 Sobic009G258100 Sobic008G077600--Sobic009G258100 Sobic008G077600--Sobic006G099700 Sobic001G143000 Sobic001G143000 Sobic008G077600--Sobic001G143000 Sobic001G450700 Sobic001G450700 Sobic008G077600--Sobic001G450700 Sobic003G238000 Sobic003G238000 Sobic008G077600--Sobic003G238000 Sobic006G178000 Sobic006G178000 Sobic008G077600--Sobic006G178000 Sobic006G261300 Sobic006G261300 Sobic008G077600--Sobic006G261300 Sobic010G232100--Sobic004G055200 Sobic010G232100--Sobic008G025500 Sobic003G130800 Sobic003G130800 Sobic010G232100--Sobic003G130800 Sobic010G178200 Sobic010G178200 Sobic010G232100--Sobic010G178200 Sobic006G180200 Sobic006G180200 Sobic010G232100--Sobic006G180200 Sobic009G046600 Sobic009G046600 Sobic010G232100--Sobic009G046600 Sobic003G380000 Sobic003G380000 Sobic010G232100--Sobic003G380000 Sobic004G219300 Sobic004G219300 Sobic010G232100--Sobic004G219300 Sobic010G232100--Sobic006G099700 Sobic008G025500--Sobic006G099700 Sobic008G025500--Sobic010G232100 Sobic008G025500--Sobic007G088000 Sobic003G279500 Sobic003G279500 Sobic008G025500--Sobic003G279500 Sobic008G025500--Sobic004G187900 Sobic003G377900 Sobic003G377900 Sobic008G025500--Sobic003G377900 Sobic008G025500--Sobic003G279300 Sobic003G288600 Sobic003G288600 Sobic008G025500--Sobic003G288600 Sobic002G261100 Sobic002G261100 Sobic008G025500--Sobic002G261100 Sobic001G292000 Sobic001G292000 Sobic009G129800--Sobic001G292000 Sobic009G129800--Sobic009G258100 Sobic003G425300 Sobic003G425300 Sobic009G129800--Sobic003G425300 Sobic009G129800--Sobic010G165500 Sobic004G057200 Sobic004G057200 Sobic009G129800--Sobic004G057200 Sobic001G412800 Sobic001G412800 Sobic009G129800--Sobic001G412800 Sobic009G129800--Sobic006G261300 Sobic002G204200 Sobic002G204200 Sobic009G129800--Sobic002G204200 Sobic008G089900 Sobic008G089900 Sobic009G129800--Sobic008G089900 Sobic002G363100 Sobic002G363100 Sobic001G357300--Sobic002G363100 Sobic005G133900 Sobic005G133900 Sobic001G357300--Sobic005G133900 Sobic001G357300--Sobic004G057200 Sobic002G306900 Sobic002G306900 Sobic001G357300--Sobic002G306900 Sobic001G357300--Sobic010G277800 Sobic009G217900 Sobic009G217900 Sobic001G357300--Sobic009G217900 Sobic009G001400 Sobic009G001400 Sobic001G357300--Sobic009G001400 Sobic010G019300 Sobic010G019300 Sobic001G357300--Sobic010G019300 Sobic009G240900 Sobic009G240900 Sobic001G357300--Sobic009G240900 Sobic003G309200 Sobic003G309200 Sobic009G180500--Sobic003G309200 Sobic009G231200 Sobic009G231200 Sobic009G180500--Sobic009G231200 Sobic002G293300 Sobic002G293300 Sobic009G180500--Sobic002G293300 Sobic009G200800 Sobic009G200800 Sobic009G180500--Sobic009G200800 Sobic003G002400 Sobic003G002400 Sobic009G180500--Sobic003G002400 Sobic001G426800 Sobic001G426800 Sobic009G180500--Sobic001G426800 Sobic001G031600 Sobic001G031600 Sobic009G180500--Sobic001G031600 Sobic009G180500--Sobic003G238000 Sobic001G358300 Sobic001G358300 Sobic009G180500--Sobic001G358300
Octagon: transcription factors


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