Gene annotation
Transcriptome id Sobic.006G099700.1
Synonym Sb06g018330
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
serine hydrolase domain containing protein, expressed
UniProt A0A1B6PL89
Pfam PF03959
Panther DB PTHR22778 PTHR22778:SF19
NCBI CDD KOG2551; Phospholipase/carboxyhydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24380 : -
RAP-DB (Rice) LOC_Os04g37710.1 : serine hydrolase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011176 , Zm00025a011173
Brachypodium KQJ82886
Barley HORVU3Hr1G056660.1 , HORVU5Hr1G035170.1 , HORVU3Hr1G038300.1 , HORVU4Hr1G043950.21 , HORVU3Hr1G038260.1 , HORVU2Hr1G026600.1 , HORVU2Hr1G063400.1 , HORVU3Hr1G056710.2 , HORVU3Hr1G056710.1 , HORVU6Hr1G067790.2 , HORVU6Hr1G067790.1 , HORVU4Hr1G043950.5 , HORVU4Hr1G043950.4 , HORVU4Hr1G043950.1
Wheat TraesCS2B02G336000 , TraesCS2A02G317900 , TraesCS2D02G315600 , TraesCS2D02G315600
Populus -


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cDNA sequences
Sobic.006G099700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G025500 DUF567 domain containing protein, putative, expressed -
2 Sobic.007G088000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
3 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
4 Sobic.010G165500 ABC-2 type transporter, putative, expressed -
5 Sobic.001G393500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ca2+ sensors group(PubMedID : 30367619)@EF hand family protein, putative, expressed K02183: calmodulin
6 Sobic.004G330700 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
7 Sobic.003G279300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoethanolamine/phosphocholine phosphatase, putative, expressed K06124: phosphoethanolamine/phosphocholine phosphatase
8 Sobic.001G499300 high-affinity nickel-transport family protein, putative, expressed -
9 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
10 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
11 Sobic.009G203100 expressed protein -
12 Sobic.010G278000 expressed protein -
13 Sobic.001G482100 expressed protein -
14 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
15 Sobic.001G459200 MYB family transcription factor, putative, expressed -
16 Sobic.003G377900 chitin-inducible gibberellin-responsive protein, putative, expressed -
17 Sobic.009G046600 stress-related protein, putative, expressed -
18 Sobic.003G288600 reticulon domain containing protein, putative, expressed -
19 Sobic.003G279500 serine acetyltransferase 1(PubMedID : 26465154)@serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
20 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -


Gene co-expression network
sample Sobic006G099700 Sobic006G099700 Sobic008G025500 Sobic008G025500 Sobic006G099700--Sobic008G025500 Sobic007G088000 Sobic007G088000 Sobic006G099700--Sobic007G088000 Sobic010G232100 Sobic010G232100 Sobic006G099700--Sobic010G232100 Sobic010G165500 Sobic010G165500 Sobic006G099700--Sobic010G165500 Sobic001G393500 Sobic001G393500 Sobic006G099700--Sobic001G393500 Sobic004G330700 Sobic004G330700 Sobic006G099700--Sobic004G330700 Sobic003G279300 Sobic003G279300 Sobic006G099700--Sobic003G279300 Sobic001G499300 Sobic001G499300 Sobic006G099700--Sobic001G499300 Sobic004G187900 Sobic004G187900 Sobic006G099700--Sobic004G187900 Sobic008G025500--Sobic006G099700 Sobic008G025500--Sobic010G232100 Sobic008G025500--Sobic007G088000 Sobic003G279500 Sobic003G279500 Sobic008G025500--Sobic003G279500 Sobic008G025500--Sobic004G187900 Sobic003G377900 Sobic003G377900 Sobic008G025500--Sobic003G377900 Sobic008G025500--Sobic003G279300 Sobic003G288600 Sobic003G288600 Sobic008G025500--Sobic003G288600 Sobic002G261100 Sobic002G261100 Sobic008G025500--Sobic002G261100 Sobic003G306100 Sobic003G306100 Sobic007G088000--Sobic003G306100 Sobic004G055200 Sobic004G055200 Sobic007G088000--Sobic004G055200 Sobic007G088000--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic007G088000--Sobic001G281400 Sobic009G141800 Sobic009G141800 Sobic007G088000--Sobic009G141800 Sobic001G040800 Sobic001G040800 Sobic007G088000--Sobic001G040800 Sobic001G459200 Sobic001G459200 Sobic007G088000--Sobic001G459200 Sobic007G088000--Sobic006G099700 Sobic007G088000--Sobic001G499300 Sobic010G232100--Sobic004G055200 Sobic010G232100--Sobic008G025500 Sobic003G130800 Sobic003G130800 Sobic010G232100--Sobic003G130800 Sobic010G178200 Sobic010G178200 Sobic010G232100--Sobic010G178200 Sobic006G180200 Sobic006G180200 Sobic010G232100--Sobic006G180200 Sobic009G046600 Sobic009G046600 Sobic010G232100--Sobic009G046600 Sobic003G380000 Sobic003G380000 Sobic010G232100--Sobic003G380000 Sobic004G219300 Sobic004G219300 Sobic010G232100--Sobic004G219300 Sobic010G232100--Sobic006G099700 Sobic010G165500--Sobic006G099700 Sobic010G165500--Sobic007G088000 Sobic010G083500 Sobic010G083500 Sobic010G165500--Sobic010G083500 Sobic008G077600 Sobic008G077600 Sobic010G165500--Sobic008G077600 Sobic010G165500--Sobic010G232100 Sobic010G165500--Sobic008G025500 Sobic009G129800 Sobic009G129800 Sobic010G165500--Sobic009G129800 Sobic001G357300 Sobic001G357300 Sobic010G165500--Sobic001G357300 Sobic009G180500 Sobic009G180500 Sobic010G165500--Sobic009G180500 Sobic001G393500--Sobic003G279300 Sobic001G393500--Sobic001G499300 Sobic004G243100 Sobic004G243100 Sobic001G393500--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic001G393500--Sobic001G018300 Sobic006G056400 Sobic006G056400 Sobic001G393500--Sobic006G056400 Sobic001G393500--Sobic003G279500 Sobic002G251000 Sobic002G251000 Sobic001G393500--Sobic002G251000 Sobic003G202200 Sobic003G202200 Sobic001G393500--Sobic003G202200 Sobic001G393500--Sobic004G187900 Sobic004G330700--Sobic004G055200 Sobic004G330700--Sobic001G459200 Sobic009G185800 Sobic009G185800 Sobic004G330700--Sobic009G185800 Sobic004G330700--Sobic001G393500 Sobic004G330700--Sobic003G130800 Sobic004G330700--Sobic001G499300 Sobic003G181500 Sobic003G181500 Sobic004G330700--Sobic003G181500 Sobic010G135000 Sobic010G135000 Sobic004G330700--Sobic010G135000 Sobic003G136000 Sobic003G136000 Sobic004G330700--Sobic003G136000 Sobic003G279300--Sobic001G393500 Sobic003G279300--Sobic003G279500 Sobic009G184100 Sobic009G184100 Sobic003G279300--Sobic009G184100 Sobic008G066401 Sobic008G066401 Sobic003G279300--Sobic008G066401 Sobic003G268600 Sobic003G268600 Sobic003G279300--Sobic003G268600 Sobic009G145700 Sobic009G145700 Sobic003G279300--Sobic009G145700 Sobic009G145600 Sobic009G145600 Sobic003G279300--Sobic009G145600 Sobic001G318700 Sobic001G318700 Sobic003G279300--Sobic001G318700 Sobic006G235000 Sobic006G235000 Sobic003G279300--Sobic006G235000 Sobic001G499300--Sobic001G281400 Sobic009G008900 Sobic009G008900 Sobic001G499300--Sobic009G008900 Sobic001G177800 Sobic001G177800 Sobic001G499300--Sobic001G177800 Sobic001G499300--Sobic004G187900 Sobic001G499300--Sobic001G459200 Sobic006G173900 Sobic006G173900 Sobic001G499300--Sobic006G173900 Sobic001G499300--Sobic001G393500 Sobic002G312400 Sobic002G312400 Sobic001G499300--Sobic002G312400 Sobic001G477300 Sobic001G477300 Sobic001G499300--Sobic001G477300 Sobic004G187900--Sobic001G281400 Sobic001G124600 Sobic001G124600 Sobic004G187900--Sobic001G124600 Sobic002G140400 Sobic002G140400 Sobic004G187900--Sobic002G140400 Sobic004G187900--Sobic009G141800 Sobic004G321300 Sobic004G321300 Sobic004G187900--Sobic004G321300 Sobic003G350300 Sobic003G350300 Sobic004G187900--Sobic003G350300 Sobic004G187900--Sobic009G008900 Sobic004G187900--Sobic001G477300 Sobic008G136400 Sobic008G136400 Sobic004G187900--Sobic008G136400
Octagon: transcription factors


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