Gene annotation
Transcriptome id Sobic.001G482100.1
Synonym Sb01g045130
Functional annotation expressed protein
UniProt C5WVS2
Pfam PF06075
Panther DB PTHR31928 PTHR31928:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14170 : Plant protein of unknown function (DUF936)
RAP-DB (Rice) LOC_Os03g08390.2 : expressed protein
MaizeGDB (Corn) Zm00025a053281 , Zm00025a056237 , Zm00025a000932
Brachypodium KQK23299 , KQK23298 , KQK23296 , KQK23295 , KQK23294 , KQK23293 , KQK23300
Barley HORVU4Hr1G077070.1 , HORVU4Hr1G077070.8 , HORVU4Hr1G077070.3 , HORVU4Hr1G077070.2 , HORVU4Hr1G077070.5 , HORVU4Hr1G077070.4 , HORVU4Hr1G077070.7 , HORVU4Hr1G077070.6
Wheat TraesCS4A02G006800 , TraesCS4D02G297000 , TraesCS4B02G298200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
2 Sobic.001G064500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
3 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.010G052800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
5 Sobic.003G288600 reticulon domain containing protein, putative, expressed -
6 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
7 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
8 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
9 Sobic.001G486100 expressed protein -
10 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
11 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G125800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
13 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
14 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
15 Sobic.010G149300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
16 Sobic.010G234700 expressed protein -
17 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
18 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G153300 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
20 Sobic.002G354900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@gibberellin response modulator protein, putative, expressed -


Gene co-expression network
sample Sobic001G482100 Sobic001G482100 Sobic002G294700 Sobic002G294700 Sobic001G482100--Sobic002G294700 Sobic001G064500 Sobic001G064500 Sobic001G482100--Sobic001G064500 Sobic010G246000 Sobic010G246000 Sobic001G482100--Sobic010G246000 Sobic010G052800 Sobic010G052800 Sobic001G482100--Sobic010G052800 Sobic003G288600 Sobic003G288600 Sobic001G482100--Sobic003G288600 Sobic009G129000 Sobic009G129000 Sobic001G482100--Sobic009G129000 Sobic010G234600 Sobic010G234600 Sobic001G482100--Sobic010G234600 Sobic010G220200 Sobic010G220200 Sobic001G482100--Sobic010G220200 Sobic001G486100 Sobic001G486100 Sobic001G482100--Sobic001G486100 Sobic008G177800 Sobic008G177800 Sobic002G294700--Sobic008G177800 Sobic002G294700--Sobic010G234600 Sobic006G231100 Sobic006G231100 Sobic002G294700--Sobic006G231100 Sobic002G374100 Sobic002G374100 Sobic002G294700--Sobic002G374100 Sobic004G286600 Sobic004G286600 Sobic002G294700--Sobic004G286600 Sobic001G077700 Sobic001G077700 Sobic002G294700--Sobic001G077700 Sobic002G294700--Sobic010G246000 Sobic004G036600 Sobic004G036600 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500 Sobic001G064500--Sobic001G482100 Sobic007G216300 Sobic007G216300 Sobic001G064500--Sobic007G216300 Sobic004G249900 Sobic004G249900 Sobic001G064500--Sobic004G249900 Sobic001G420100 Sobic001G420100 Sobic001G064500--Sobic001G420100 Sobic001G064500--Sobic010G052800 Sobic004G020000 Sobic004G020000 Sobic001G064500--Sobic004G020000 Sobic003G130800 Sobic003G130800 Sobic001G064500--Sobic003G130800 Sobic003G136000 Sobic003G136000 Sobic001G064500--Sobic003G136000 Sobic003G310700 Sobic003G310700 Sobic001G064500--Sobic003G310700 Sobic010G246000--Sobic002G294700 Sobic010G246000--Sobic002G374100 Sobic003G019200 Sobic003G019200 Sobic010G246000--Sobic003G019200 Sobic001G147200 Sobic001G147200 Sobic010G246000--Sobic001G147200 Sobic010G245800 Sobic010G245800 Sobic010G246000--Sobic010G245800 Sobic010G246000--Sobic008G177800 Sobic002G354900 Sobic002G354900 Sobic010G246000--Sobic002G354900 Sobic010G246000--Sobic010G234600 Sobic010G246000--Sobic004G036600 Sobic002G330300 Sobic002G330300 Sobic010G052800--Sobic002G330300 Sobic002G413000 Sobic002G413000 Sobic010G052800--Sobic002G413000 Sobic002G293300 Sobic002G293300 Sobic010G052800--Sobic002G293300 Sobic010G052800--Sobic001G482100 Sobic004G031600 Sobic004G031600 Sobic010G052800--Sobic004G031600 Sobic006G263100 Sobic006G263100 Sobic010G052800--Sobic006G263100 Sobic002G379400 Sobic002G379400 Sobic010G052800--Sobic002G379400 Sobic004G280800 Sobic004G280800 Sobic010G052800--Sobic004G280800 Sobic007G059900 Sobic007G059900 Sobic010G052800--Sobic007G059900 Sobic006G267200 Sobic006G267200 Sobic003G288600--Sobic006G267200 Sobic010G217800 Sobic010G217800 Sobic003G288600--Sobic010G217800 Sobic003G288600--Sobic010G220200 Sobic003G288600--Sobic006G231100 Sobic003G288600--Sobic008G177800 Sobic009G141800 Sobic009G141800 Sobic003G288600--Sobic009G141800 Sobic002G415600 Sobic002G415600 Sobic003G288600--Sobic002G415600 Sobic001G477300 Sobic001G477300 Sobic003G288600--Sobic001G477300 Sobic005G103300 Sobic005G103300 Sobic003G288600--Sobic005G103300 Sobic010G086200 Sobic010G086200 Sobic009G129000--Sobic010G086200 Sobic005G028700 Sobic005G028700 Sobic009G129000--Sobic005G028700 Sobic009G183300 Sobic009G183300 Sobic009G129000--Sobic009G183300 Sobic009G033700 Sobic009G033700 Sobic009G129000--Sobic009G033700 Sobic009G200700 Sobic009G200700 Sobic009G129000--Sobic009G200700 Sobic004G065500 Sobic004G065500 Sobic009G129000--Sobic004G065500 Sobic009G129000--Sobic010G217800 Sobic009G129000--Sobic006G267200 Sobic010G204600 Sobic010G204600 Sobic009G129000--Sobic010G204600 Sobic010G234700 Sobic010G234700 Sobic010G234600--Sobic010G234700 Sobic010G234600--Sobic008G177800 Sobic010G234600--Sobic001G077700 Sobic010G234600--Sobic006G231100 Sobic010G234600--Sobic002G294700 Sobic010G234600--Sobic002G415600 Sobic006G231332 Sobic006G231332 Sobic010G234600--Sobic006G231332 Sobic009G071800 Sobic009G071800 Sobic010G234600--Sobic009G071800 Sobic002G248100 Sobic002G248100 Sobic010G234600--Sobic002G248100 Sobic010G220200--Sobic010G217800 Sobic005G010200 Sobic005G010200 Sobic010G220200--Sobic005G010200 Sobic010G220200--Sobic002G415600 Sobic006G190500 Sobic006G190500 Sobic010G220200--Sobic006G190500 Sobic006G230800 Sobic006G230800 Sobic010G220200--Sobic006G230800 Sobic010G220200--Sobic003G288600 Sobic010G220200--Sobic006G231100 Sobic010G220200--Sobic008G177800 Sobic006G230900 Sobic006G230900 Sobic010G220200--Sobic006G230900 Sobic002G261200 Sobic002G261200 Sobic001G486100--Sobic002G261200 Sobic003G279500 Sobic003G279500 Sobic001G486100--Sobic003G279500 Sobic010G198600 Sobic010G198600 Sobic001G486100--Sobic010G198600 Sobic006G190100 Sobic006G190100 Sobic001G486100--Sobic006G190100 Sobic004G212900 Sobic004G212900 Sobic001G486100--Sobic004G212900 Sobic001G486100--Sobic006G230900 Sobic001G486100--Sobic006G190500 Sobic001G138600 Sobic001G138600 Sobic001G486100--Sobic001G138600 Sobic001G107800 Sobic001G107800 Sobic001G486100--Sobic001G107800
Octagon: transcription factors


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