Gene annotation
| Transcriptome id | Sobic.003G153300.1 |
|---|---|
| Synonym | Sb03g013340 |
| Functional annotation | mitochondrial carrier protein, putative, expressed |
| UniProt | C5XJQ3 |
| Pfam | PF00153 |
| Panther DB | PTHR24089 PTHR24089:SF296 |
| NCBI CDD | KOG0765; Predicted mitochondrial carrier protein |
| KEGG Orthology | K15121; solute carrier family 25, member 44 |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT5G15640 : Mitochondrial substrate carrier family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g22600.1 : mitochondrial carrier protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a036150 , Zm00025a024415 |
| Brachypodium | KQK04215 , KQK04216 , PNT70456 |
| Barley | HORVU2Hr1G027760.6 , HORVU2Hr1G027760.7 , HORVU2Hr1G027760.4 , HORVU2Hr1G027760.5 , HORVU2Hr1G027760.2 , HORVU2Hr1G027760.3 , HORVU2Hr1G027760.1 |
| Wheat | TraesCS2B02G178800 , TraesCS2D02G159100 , TraesCS2A02G153700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G036600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed | - |
| 2 | Sobic.010G246000 | zinc finger, C3HC4 type domain containing protein, expressed | - |
| 3 | Sobic.007G035700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed | K17871: NADH:ubiquinone reductase (non-electrogenic) |
| 4 | Sobic.001G147200 | DNA-binding protein-like, putative, expressed | K10624: E3 ubiquitin-protein ligase RBBP6 |
| 5 | Sobic.006G205600 | glycosyl hydrolases family 16, putative, expressed | - |
| 6 | Sobic.002G294700 | Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed | - |
| 7 | Sobic.001G482100 | expressed protein | - |
| 8 | Sobic.002G374100 | tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed | K13464: jasmonate ZIM domain-containing protein |
| 9 | Sobic.003G019200 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein | - |
| 10 | Sobic.006G231100 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed | - |
| 11 | Sobic.001G538866 | - | - |
| 12 | Sobic.002G354900 | "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@gibberellin response modulator protein, putative, expressed | - |
| 13 | Sobic.005G028700 | peflin, putative, expressed | K13448: calcium-binding protein CML |
| 14 | Sobic.004G286600 | Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed | - |
| 15 | Sobic.004G257300 | GPI-anchored protein, putative, expressed | - |
| 16 | Sobic.001G203200 | E2F-related protein, putative, expressed | - |
| 17 | Sobic.010G234600 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed | - |
| 18 | Sobic.001G173300 | alpha-1,4-glucan-protein synthase, putative, expressed | K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase |
| 19 | Sobic.003G288600 | reticulon domain containing protein, putative, expressed | - |
| 20 | Sobic.007G198100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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