Gene annotation
Transcriptome id Sobic.001G203200.1
Synonym Sb01g017910
Functional annotation E2F-related protein, putative, expressed
UniProt C5WWF7
Pfam PF04678
Panther DB PTHR13462 PTHR13462:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23790 : Protein of unknown function (DUF607)
RAP-DB (Rice) LOC_Os10g35770.1 : E2F-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a052992 , Zm00025a001399 , Zm00025a006424 , Zm00025a006422
Brachypodium KQJ97328 , KQK22771
Barley HORVU1Hr1G045220.4 , HORVU1Hr1G045220.5 , HORVU1Hr1G045220.6 , HORVU1Hr1G045220.1 , HORVU1Hr1G045220.2 , HORVU1Hr1G045220.3 , HORVU4Hr1G066140.1
Wheat TraesCS1A02G168600 , TraesCS6B02G472800 , TraesCS1D02G166600 , TraesCS1B02G188300
Populus -


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cDNA sequences
Sobic.001G203200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
2 Sobic.001G125800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
3 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
4 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
5 Sobic.009G220200 exostosin family domain containing protein, expressed -
6 Sobic.003G153300 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
7 Sobic.010G052800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
8 Sobic.002G362900 IBS1, putative, expressed -
9 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
10 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.010G228000 Protein kinase domain containing protein, expressed -
13 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
14 Sobic.007G035700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
15 Sobic.001G482100 expressed protein -
16 Sobic.004G257300 GPI-anchored protein, putative, expressed -
17 Sobic.007G057100 expressed protein -
18 Sobic.001G330700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
19 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
20 Sobic.001G510700 expressed protein -


Gene co-expression network
sample Sobic001G203200 Sobic001G203200 Sobic009G208800 Sobic009G208800 Sobic001G203200--Sobic009G208800 Sobic001G125800 Sobic001G125800 Sobic001G203200--Sobic001G125800 Sobic004G036600 Sobic004G036600 Sobic001G203200--Sobic004G036600 Sobic002G294700 Sobic002G294700 Sobic001G203200--Sobic002G294700 Sobic009G220200 Sobic009G220200 Sobic001G203200--Sobic009G220200 Sobic003G153300 Sobic003G153300 Sobic001G203200--Sobic003G153300 Sobic010G052800 Sobic010G052800 Sobic001G203200--Sobic010G052800 Sobic002G362900 Sobic002G362900 Sobic001G203200--Sobic002G362900 Sobic002G374100 Sobic002G374100 Sobic001G203200--Sobic002G374100 Sobic001G173300 Sobic001G173300 Sobic009G208800--Sobic001G173300 Sobic004G257300 Sobic004G257300 Sobic009G208800--Sobic004G257300 Sobic009G208800--Sobic009G220200 Sobic003G296700 Sobic003G296700 Sobic009G208800--Sobic003G296700 Sobic001G516600 Sobic001G516600 Sobic009G208800--Sobic001G516600 Sobic007G057100 Sobic007G057100 Sobic009G208800--Sobic007G057100 Sobic009G208800--Sobic002G294700 Sobic005G231700 Sobic005G231700 Sobic009G208800--Sobic005G231700 Sobic008G177800 Sobic008G177800 Sobic009G208800--Sobic008G177800 Sobic009G129000 Sobic009G129000 Sobic001G125800--Sobic009G129000 Sobic001G125800--Sobic001G516600 Sobic001G125800--Sobic004G036600 Sobic001G125800--Sobic008G177800 Sobic010G217800 Sobic010G217800 Sobic001G125800--Sobic010G217800 Sobic001G125800--Sobic002G294700 Sobic003G037800 Sobic003G037800 Sobic001G125800--Sobic003G037800 Sobic009G033700 Sobic009G033700 Sobic001G125800--Sobic009G033700 Sobic009G200700 Sobic009G200700 Sobic001G125800--Sobic009G200700 Sobic004G036600--Sobic002G294700 Sobic004G036600--Sobic008G177800 Sobic006G231100 Sobic006G231100 Sobic004G036600--Sobic006G231100 Sobic004G036600--Sobic001G173300 Sobic010G234600 Sobic010G234600 Sobic004G036600--Sobic010G234600 Sobic004G036600--Sobic001G516600 Sobic004G036600--Sobic002G374100 Sobic009G141800 Sobic009G141800 Sobic004G036600--Sobic009G141800 Sobic009G217000 Sobic009G217000 Sobic004G036600--Sobic009G217000 Sobic002G294700--Sobic008G177800 Sobic002G294700--Sobic010G234600 Sobic002G294700--Sobic006G231100 Sobic002G294700--Sobic002G374100 Sobic004G286600 Sobic004G286600 Sobic002G294700--Sobic004G286600 Sobic001G077700 Sobic001G077700 Sobic002G294700--Sobic001G077700 Sobic010G246000 Sobic010G246000 Sobic002G294700--Sobic010G246000 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500 Sobic009G220200--Sobic009G208800 Sobic009G220200--Sobic003G296700 Sobic001G051800 Sobic001G051800 Sobic009G220200--Sobic001G051800 Sobic009G220200--Sobic001G516600 Sobic009G220200--Sobic001G173300 Sobic009G220200--Sobic004G257300 Sobic009G220200--Sobic002G374100 Sobic009G220200--Sobic002G362900 Sobic007G188100 Sobic007G188100 Sobic009G220200--Sobic007G188100 Sobic003G153300--Sobic004G036600 Sobic003G153300--Sobic010G246000 Sobic007G035700 Sobic007G035700 Sobic003G153300--Sobic007G035700 Sobic001G147200 Sobic001G147200 Sobic003G153300--Sobic001G147200 Sobic006G205600 Sobic006G205600 Sobic003G153300--Sobic006G205600 Sobic003G153300--Sobic002G294700 Sobic001G482100 Sobic001G482100 Sobic003G153300--Sobic001G482100 Sobic003G153300--Sobic002G374100 Sobic003G019200 Sobic003G019200 Sobic003G153300--Sobic003G019200 Sobic002G330300 Sobic002G330300 Sobic010G052800--Sobic002G330300 Sobic002G413000 Sobic002G413000 Sobic010G052800--Sobic002G413000 Sobic002G293300 Sobic002G293300 Sobic010G052800--Sobic002G293300 Sobic010G052800--Sobic001G482100 Sobic004G031600 Sobic004G031600 Sobic010G052800--Sobic004G031600 Sobic006G263100 Sobic006G263100 Sobic010G052800--Sobic006G263100 Sobic002G379400 Sobic002G379400 Sobic010G052800--Sobic002G379400 Sobic004G280800 Sobic004G280800 Sobic010G052800--Sobic004G280800 Sobic007G059900 Sobic007G059900 Sobic010G052800--Sobic007G059900 Sobic002G362900--Sobic007G188100 Sobic006G087900 Sobic006G087900 Sobic002G362900--Sobic006G087900 Sobic002G362900--Sobic009G220200 Sobic002G362900--Sobic009G208800 Sobic004G145200 Sobic004G145200 Sobic002G362900--Sobic004G145200 Sobic002G362900--Sobic005G231700 Sobic008G016900 Sobic008G016900 Sobic002G362900--Sobic008G016900 Sobic010G228000 Sobic010G228000 Sobic002G362900--Sobic010G228000 Sobic001G409900 Sobic001G409900 Sobic002G362900--Sobic001G409900 Sobic002G374100--Sobic002G294700 Sobic002G374100--Sobic010G246000 Sobic002G374100--Sobic001G516600 Sobic002G354900 Sobic002G354900 Sobic002G374100--Sobic002G354900 Sobic002G374100--Sobic010G228000 Sobic002G374100--Sobic004G036600 Sobic002G353400 Sobic002G353400 Sobic002G374100--Sobic002G353400 Sobic002G374100--Sobic008G177800 Sobic002G118600 Sobic002G118600 Sobic002G374100--Sobic002G118600
Octagon: transcription factors


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