Gene annotation
Transcriptome id Sobic.001G510700.1
Synonym Sb01g047670
Functional annotation expressed protein
UniProt A0A1B6QQM4
Pfam PF12043
Panther DB PTHR31390 PTHR31390:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33360 : Protein of unknown function (DUF3527)
RAP-DB (Rice) LOC_Os03g04600.1 : expressed protein
MaizeGDB (Corn) Zm00025a000543
Brachypodium PNT78240 , KQK23740 , KQK23737 , KQK23738 , KQK23739
Barley HORVU4Hr1G083870.6 , HORVU4Hr1G083870.7 , HORVU4Hr1G083870.4 , HORVU4Hr1G083870.3 , HORVU4Hr1G083870.1
Wheat TraesCS4B02G340400 , TraesCS4B02G340400 , TraesCS4B02G340400 , TraesCS5A02G509800 , TraesCS5A02G509800 , TraesCS4D02G336500 , TraesCS4D02G336500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.001G103200 DNA binding protein, putative, expressed -
3 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.010G228000 Protein kinase domain containing protein, expressed -
5 Sobic.009G220200 exostosin family domain containing protein, expressed -
6 Sobic.002G083266 - K00326: cytochrome-b5 reductase
7 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
8 Sobic.001G203200 E2F-related protein, putative, expressed -
9 Sobic.001G482100 expressed protein -
10 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
11 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
12 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
13 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -
14 Sobic.007G006600 expressed protein -
15 Sobic.009G046600 stress-related protein, putative, expressed -
16 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
17 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
18 Sobic.010G094600 zinc finger, C3HC4 type, domain containing protein, expressed -
19 Sobic.010G052800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
20 Sobic.002G362900 IBS1, putative, expressed -


Gene co-expression network
sample Sobic001G510700 Sobic001G510700 Sobic010G246000 Sobic010G246000 Sobic001G510700--Sobic010G246000 Sobic001G103200 Sobic001G103200 Sobic001G510700--Sobic001G103200 Sobic003G019200 Sobic003G019200 Sobic001G510700--Sobic003G019200 Sobic010G228000 Sobic010G228000 Sobic001G510700--Sobic010G228000 Sobic009G220200 Sobic009G220200 Sobic001G510700--Sobic009G220200 Sobic002G083266 Sobic002G083266 Sobic001G510700--Sobic002G083266 Sobic002G330300 Sobic002G330300 Sobic001G510700--Sobic002G330300 Sobic001G203200 Sobic001G203200 Sobic001G510700--Sobic001G203200 Sobic001G482100 Sobic001G482100 Sobic001G510700--Sobic001G482100 Sobic002G294700 Sobic002G294700 Sobic010G246000--Sobic002G294700 Sobic002G374100 Sobic002G374100 Sobic010G246000--Sobic002G374100 Sobic010G246000--Sobic003G019200 Sobic001G147200 Sobic001G147200 Sobic010G246000--Sobic001G147200 Sobic010G245800 Sobic010G245800 Sobic010G246000--Sobic010G245800 Sobic008G177800 Sobic008G177800 Sobic010G246000--Sobic008G177800 Sobic002G354900 Sobic002G354900 Sobic010G246000--Sobic002G354900 Sobic010G234600 Sobic010G234600 Sobic010G246000--Sobic010G234600 Sobic004G036600 Sobic004G036600 Sobic010G246000--Sobic004G036600 Sobic001G516100 Sobic001G516100 Sobic001G103200--Sobic001G516100 Sobic001G358300 Sobic001G358300 Sobic001G103200--Sobic001G358300 Sobic004G271700 Sobic004G271700 Sobic001G103200--Sobic004G271700 Sobic001G103200--Sobic001G510700 Sobic009G135100 Sobic009G135100 Sobic001G103200--Sobic009G135100 Sobic009G219900 Sobic009G219900 Sobic001G103200--Sobic009G219900 Sobic004G350300 Sobic004G350300 Sobic001G103200--Sobic004G350300 Sobic001G350900 Sobic001G350900 Sobic001G103200--Sobic001G350900 Sobic003G002400 Sobic003G002400 Sobic001G103200--Sobic003G002400 Sobic003G019200--Sobic010G246000 Sobic003G019200--Sobic001G147200 Sobic009G200700 Sobic009G200700 Sobic003G019200--Sobic009G200700 Sobic001G399100 Sobic001G399100 Sobic003G019200--Sobic001G399100 Sobic007G198100 Sobic007G198100 Sobic003G019200--Sobic007G198100 Sobic003G019200--Sobic002G374100 Sobic003G429300 Sobic003G429300 Sobic003G019200--Sobic003G429300 Sobic010G224200 Sobic010G224200 Sobic003G019200--Sobic010G224200 Sobic008G111100 Sobic008G111100 Sobic003G019200--Sobic008G111100 Sobic010G228000--Sobic002G374100 Sobic002G118600 Sobic002G118600 Sobic010G228000--Sobic002G118600 Sobic007G188100 Sobic007G188100 Sobic010G228000--Sobic007G188100 Sobic010G228000--Sobic002G294700 Sobic010G228000--Sobic002G330300 Sobic004G280800 Sobic004G280800 Sobic010G228000--Sobic004G280800 Sobic010G228000--Sobic010G246000 Sobic002G379400 Sobic002G379400 Sobic010G228000--Sobic002G379400 Sobic001G290400 Sobic001G290400 Sobic010G228000--Sobic001G290400 Sobic009G208800 Sobic009G208800 Sobic009G220200--Sobic009G208800 Sobic003G296700 Sobic003G296700 Sobic009G220200--Sobic003G296700 Sobic001G051800 Sobic001G051800 Sobic009G220200--Sobic001G051800 Sobic001G516600 Sobic001G516600 Sobic009G220200--Sobic001G516600 Sobic001G173300 Sobic001G173300 Sobic009G220200--Sobic001G173300 Sobic004G257300 Sobic004G257300 Sobic009G220200--Sobic004G257300 Sobic009G220200--Sobic002G374100 Sobic002G362900 Sobic002G362900 Sobic009G220200--Sobic002G362900 Sobic009G220200--Sobic007G188100 Sobic003G367451 Sobic003G367451 Sobic002G083266--Sobic003G367451 Sobic006G264300 Sobic006G264300 Sobic002G083266--Sobic006G264300 Sobic001G415000 Sobic001G415000 Sobic002G083266--Sobic001G415000 Sobic009G111600 Sobic009G111600 Sobic002G083266--Sobic009G111600 Sobic001G224400 Sobic001G224400 Sobic002G083266--Sobic001G224400 Sobic006G062800 Sobic006G062800 Sobic002G083266--Sobic006G062800 Sobic002G261900 Sobic002G261900 Sobic002G083266--Sobic002G261900 Sobic010G213400 Sobic010G213400 Sobic002G083266--Sobic010G213400 Sobic004G272800 Sobic004G272800 Sobic002G083266--Sobic004G272800 Sobic008G016900 Sobic008G016900 Sobic002G330300--Sobic008G016900 Sobic002G330300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G330300--Sobic010G052800 Sobic002G330300--Sobic010G228000 Sobic007G011000 Sobic007G011000 Sobic002G330300--Sobic007G011000 Sobic004G025000 Sobic004G025000 Sobic002G330300--Sobic004G025000 Sobic002G330300--Sobic002G118600 Sobic006G263100 Sobic006G263100 Sobic002G330300--Sobic006G263100 Sobic002G330300--Sobic007G188100 Sobic001G203200--Sobic009G208800 Sobic001G125800 Sobic001G125800 Sobic001G203200--Sobic001G125800 Sobic001G203200--Sobic004G036600 Sobic001G203200--Sobic002G294700 Sobic001G203200--Sobic009G220200 Sobic003G153300 Sobic003G153300 Sobic001G203200--Sobic003G153300 Sobic001G203200--Sobic010G052800 Sobic001G203200--Sobic002G362900 Sobic001G203200--Sobic002G374100 Sobic001G482100--Sobic002G294700 Sobic001G064500 Sobic001G064500 Sobic001G482100--Sobic001G064500 Sobic001G482100--Sobic010G246000 Sobic001G482100--Sobic010G052800 Sobic003G288600 Sobic003G288600 Sobic001G482100--Sobic003G288600 Sobic009G129000 Sobic009G129000 Sobic001G482100--Sobic009G129000 Sobic001G482100--Sobic010G234600 Sobic010G220200 Sobic010G220200 Sobic001G482100--Sobic010G220200 Sobic001G486100 Sobic001G486100 Sobic001G482100--Sobic001G486100
Octagon: transcription factors


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