Gene annotation
Transcriptome id Sobic.007G035700.1
Synonym Sb07g003070, NDB2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed
UniProt C5YN29
Pfam PF00070
Panther DB PTHR10632 PTHR10632:SF8
NCBI CDD -
KEGG Orthology K17871; NADH:ubiquinone reductase (non-electrogenic)
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G05020 : NAD(P)H dehydrogenase B2
RAP-DB (Rice) LOC_Os06g47000.1 : external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a039885 , Zm00025a027277 , Zm00025a030151
Brachypodium KQK17215 , KQJ95034
Barley HORVU7Hr1G101500.4 , HORVU7Hr1G101500.5 , HORVU7Hr1G101500.6 , HORVU7Hr1G101500.7 , HORVU7Hr1G101500.1 , HORVU7Hr1G101500.3 , HORVU7Hr1G073050.8 , HORVU7Hr1G073050.9 , HORVU7Hr1G073050.4 , HORVU7Hr1G073050.5 , HORVU7Hr1G073050.6 , HORVU7Hr1G073050.7 , HORVU7Hr1G073050.1 , HORVU7Hr1G073050.2 , HORVU7Hr1G073050.3
Wheat TraesCS7B02G348600 , TraesCS7B02G348600 , TraesCS7D02G303500 , TraesCS7A02G448800 , TraesCS7A02G448800 , TraesCS7B02G206900 , TraesCS7A02G306600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G153300 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
2 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
3 Sobic.007G198100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane protein, putative, expressed -
4 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
5 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
6 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
7 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
8 Sobic.001G125800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
9 Sobic.001G206400 fiber protein Fb34, putative, expressed -
10 Sobic.010G086200 GRAM domain containing protein, expressed -
11 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
13 Sobic.010G065900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@formin-like protein 13, putative, expressed -
14 Sobic.001G538866 - -
15 Sobic.002G356101 - -
16 Sobic.001G409900 transporter, putative, expressed -
17 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
18 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
19 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.003G037800 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic007G035700 Sobic007G035700 Sobic003G153300 Sobic003G153300 Sobic007G035700--Sobic003G153300 Sobic004G036600 Sobic004G036600 Sobic007G035700--Sobic004G036600 Sobic007G198100 Sobic007G198100 Sobic007G035700--Sobic007G198100 Sobic001G516600 Sobic001G516600 Sobic007G035700--Sobic001G516600 Sobic009G033700 Sobic009G033700 Sobic007G035700--Sobic009G033700 Sobic001G173300 Sobic001G173300 Sobic007G035700--Sobic001G173300 Sobic002G374100 Sobic002G374100 Sobic007G035700--Sobic002G374100 Sobic001G125800 Sobic001G125800 Sobic007G035700--Sobic001G125800 Sobic001G206400 Sobic001G206400 Sobic007G035700--Sobic001G206400 Sobic003G153300--Sobic004G036600 Sobic010G246000 Sobic010G246000 Sobic003G153300--Sobic010G246000 Sobic003G153300--Sobic007G035700 Sobic001G147200 Sobic001G147200 Sobic003G153300--Sobic001G147200 Sobic006G205600 Sobic006G205600 Sobic003G153300--Sobic006G205600 Sobic002G294700 Sobic002G294700 Sobic003G153300--Sobic002G294700 Sobic001G482100 Sobic001G482100 Sobic003G153300--Sobic001G482100 Sobic003G153300--Sobic002G374100 Sobic003G019200 Sobic003G019200 Sobic003G153300--Sobic003G019200 Sobic004G036600--Sobic002G294700 Sobic008G177800 Sobic008G177800 Sobic004G036600--Sobic008G177800 Sobic006G231100 Sobic006G231100 Sobic004G036600--Sobic006G231100 Sobic004G036600--Sobic001G173300 Sobic010G234600 Sobic010G234600 Sobic004G036600--Sobic010G234600 Sobic004G036600--Sobic001G516600 Sobic004G036600--Sobic002G374100 Sobic009G141800 Sobic009G141800 Sobic004G036600--Sobic009G141800 Sobic009G217000 Sobic009G217000 Sobic004G036600--Sobic009G217000 Sobic007G198100--Sobic009G033700 Sobic010G086200 Sobic010G086200 Sobic007G198100--Sobic010G086200 Sobic002G356101 Sobic002G356101 Sobic007G198100--Sobic002G356101 Sobic009G200700 Sobic009G200700 Sobic007G198100--Sobic009G200700 Sobic003G037800 Sobic003G037800 Sobic007G198100--Sobic003G037800 Sobic007G198100--Sobic003G019200 Sobic001G281400 Sobic001G281400 Sobic007G198100--Sobic001G281400 Sobic009G143400 Sobic009G143400 Sobic007G198100--Sobic009G143400 Sobic010G213400 Sobic010G213400 Sobic007G198100--Sobic010G213400 Sobic001G516600--Sobic001G173300 Sobic007G151100 Sobic007G151100 Sobic001G516600--Sobic007G151100 Sobic001G516600--Sobic003G037800 Sobic003G296700 Sobic003G296700 Sobic001G516600--Sobic003G296700 Sobic010G268400 Sobic010G268400 Sobic001G516600--Sobic010G268400 Sobic001G532200 Sobic001G532200 Sobic001G516600--Sobic001G532200 Sobic006G131400 Sobic006G131400 Sobic001G516600--Sobic006G131400 Sobic001G516600--Sobic008G177800 Sobic002G245100 Sobic002G245100 Sobic001G516600--Sobic002G245100 Sobic009G033700--Sobic010G086200 Sobic009G033700--Sobic003G037800 Sobic009G033700--Sobic001G281400 Sobic003G249800 Sobic003G249800 Sobic009G033700--Sobic003G249800 Sobic009G033700--Sobic007G198100 Sobic009G129000 Sobic009G129000 Sobic009G033700--Sobic009G129000 Sobic009G033700--Sobic002G245100 Sobic009G033700--Sobic009G143400 Sobic004G065500 Sobic004G065500 Sobic009G033700--Sobic004G065500 Sobic001G173300--Sobic001G516600 Sobic004G257300 Sobic004G257300 Sobic001G173300--Sobic004G257300 Sobic001G173300--Sobic004G036600 Sobic009G208800 Sobic009G208800 Sobic001G173300--Sobic009G208800 Sobic001G084100 Sobic001G084100 Sobic001G173300--Sobic001G084100 Sobic010G065900 Sobic010G065900 Sobic001G173300--Sobic010G065900 Sobic001G173300--Sobic007G151100 Sobic009G027900 Sobic009G027900 Sobic001G173300--Sobic009G027900 Sobic005G168100 Sobic005G168100 Sobic001G173300--Sobic005G168100 Sobic002G374100--Sobic002G294700 Sobic002G374100--Sobic010G246000 Sobic002G374100--Sobic001G516600 Sobic002G354900 Sobic002G354900 Sobic002G374100--Sobic002G354900 Sobic010G228000 Sobic010G228000 Sobic002G374100--Sobic010G228000 Sobic002G374100--Sobic004G036600 Sobic002G353400 Sobic002G353400 Sobic002G374100--Sobic002G353400 Sobic002G374100--Sobic008G177800 Sobic002G118600 Sobic002G118600 Sobic002G374100--Sobic002G118600 Sobic001G125800--Sobic009G129000 Sobic001G125800--Sobic001G516600 Sobic001G125800--Sobic004G036600 Sobic001G125800--Sobic008G177800 Sobic010G217800 Sobic010G217800 Sobic001G125800--Sobic010G217800 Sobic001G125800--Sobic002G294700 Sobic001G125800--Sobic003G037800 Sobic001G125800--Sobic009G033700 Sobic001G125800--Sobic009G200700 Sobic001G206400--Sobic009G033700 Sobic001G206400--Sobic001G516600 Sobic001G206400--Sobic002G245100 Sobic001G206400--Sobic003G037800 Sobic001G206400--Sobic009G200700 Sobic001G206400--Sobic002G374100 Sobic001G206400--Sobic010G268400 Sobic001G206400--Sobic010G086200 Sobic001G206400--Sobic001G281400
Octagon: transcription factors


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