Gene annotation
Transcriptome id Sobic.003G279300.1
Synonym ATPS2, Sb03g033100, PS2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
phosphoethanolamine/phosphocholine phosphatase, putative, expressed
UniProt C5XID0
Pfam PF06888
Panther DB PTHR20889 PTHR20889:SF4
NCBI CDD KOG3120; Predicted haloacid dehalogenase-like hydrolase
KEGG Orthology K06124; phosphoethanolamine/phosphocholine phosphatase
Gene Ontology GO:0016791; phosphatase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G73010 : phosphate starvation-induced gene 2
RAP-DB (Rice) LOC_Os01g52230.1 : phosphoethanolamine/phosphocholine phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a038983 , Zm00025a027767
Brachypodium KQJ94105 , KQK08589 , KQK09515
Barley HORVU3Hr1G068380.1 , HORVU3Hr1G068380.2 , HORVU3Hr1G068380.3 , HORVU3Hr1G068390.5 , HORVU3Hr1G068390.4 , HORVU3Hr1G068390.3 , HORVU3Hr1G068390.2 , HORVU3Hr1G068390.1
Wheat TraesCS3D02G217400 , TraesCS3B02G245400 , TraesCS3B02G321700 , TraesCS3A02G215400 , TraesCS3A02G215400
Populus -


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cDNA sequences
Sobic.003G279300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G393500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ca2+ sensors group(PubMedID : 30367619)@EF hand family protein, putative, expressed K02183: calmodulin
2 Sobic.003G279500 serine acetyltransferase 1(PubMedID : 26465154)@serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
3 Sobic.009G184100 - -
4 Sobic.008G066401 - -
5 Sobic.003G268600 - -
6 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.006G235000 expressed protein -
10 Sobic.009G122400 expressed protein -
11 Sobic.006G054800 "glycerophosphodiester phosphodiesterase, up-regulated under drought stress, involved in the final step of the choline biosynthesis pathway, mapped into a QTL involved in stay green (QSTG1_6) "(PubMedID : 24655390)@Glycerophosphodiester phosphodiesterase ( At)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
12 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
13 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
14 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
15 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.005G086600 O-methyltransferase, putative, expressed -
17 Sobic.010G209200 WRKY28, expressed -
18 Sobic.007G169700 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed K01240: uridine nucleosidase
19 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.004G191400 - -


Gene co-expression network
sample Sobic003G279300 Sobic003G279300 Sobic001G393500 Sobic001G393500 Sobic003G279300--Sobic001G393500 Sobic003G279500 Sobic003G279500 Sobic003G279300--Sobic003G279500 Sobic009G184100 Sobic009G184100 Sobic003G279300--Sobic009G184100 Sobic008G066401 Sobic008G066401 Sobic003G279300--Sobic008G066401 Sobic003G268600 Sobic003G268600 Sobic003G279300--Sobic003G268600 Sobic009G145700 Sobic009G145700 Sobic003G279300--Sobic009G145700 Sobic009G145600 Sobic009G145600 Sobic003G279300--Sobic009G145600 Sobic001G318700 Sobic001G318700 Sobic003G279300--Sobic001G318700 Sobic006G235000 Sobic006G235000 Sobic003G279300--Sobic006G235000 Sobic001G393500--Sobic003G279300 Sobic001G499300 Sobic001G499300 Sobic001G393500--Sobic001G499300 Sobic004G243100 Sobic004G243100 Sobic001G393500--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic001G393500--Sobic001G018300 Sobic006G056400 Sobic006G056400 Sobic001G393500--Sobic006G056400 Sobic001G393500--Sobic003G279500 Sobic002G251000 Sobic002G251000 Sobic001G393500--Sobic002G251000 Sobic003G202200 Sobic003G202200 Sobic001G393500--Sobic003G202200 Sobic004G187900 Sobic004G187900 Sobic001G393500--Sobic004G187900 Sobic007G074000 Sobic007G074000 Sobic003G279500--Sobic007G074000 Sobic003G228900 Sobic003G228900 Sobic003G279500--Sobic003G228900 Sobic001G138600 Sobic001G138600 Sobic003G279500--Sobic001G138600 Sobic007G169700 Sobic007G169700 Sobic003G279500--Sobic007G169700 Sobic009G184000 Sobic009G184000 Sobic003G279500--Sobic009G184000 Sobic004G237800 Sobic004G237800 Sobic003G279500--Sobic004G237800 Sobic001G112200 Sobic001G112200 Sobic003G279500--Sobic001G112200 Sobic004G141200 Sobic004G141200 Sobic003G279500--Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic003G279500--Sobic003G369100 Sobic009G184100--Sobic009G145700 Sobic009G184100--Sobic008G066401 Sobic009G184100--Sobic001G318700 Sobic009G184100--Sobic001G112200 Sobic003G064200 Sobic003G064200 Sobic009G184100--Sobic003G064200 Sobic009G184100--Sobic006G235000 Sobic009G184100--Sobic009G145600 Sobic009G184100--Sobic009G184000 Sobic009G184100--Sobic003G268600 Sobic008G066401--Sobic009G145700 Sobic008G066401--Sobic009G145600 Sobic008G066200 Sobic008G066200 Sobic008G066401--Sobic008G066200 Sobic002G012500 Sobic002G012500 Sobic008G066401--Sobic002G012500 Sobic008G066401--Sobic007G169700 Sobic008G066401--Sobic009G184000 Sobic006G008000 Sobic006G008000 Sobic008G066401--Sobic006G008000 Sobic003G043500 Sobic003G043500 Sobic008G066401--Sobic003G043500 Sobic003G362700 Sobic003G362700 Sobic008G066401--Sobic003G362700 Sobic003G442100 Sobic003G442100 Sobic003G268600--Sobic003G442100 Sobic001G330400 Sobic001G330400 Sobic003G268600--Sobic001G330400 Sobic003G043600 Sobic003G043600 Sobic003G268600--Sobic003G043600 Sobic006G075400 Sobic006G075400 Sobic003G268600--Sobic006G075400 Sobic005G086600 Sobic005G086600 Sobic003G268600--Sobic005G086600 Sobic007G017500 Sobic007G017500 Sobic003G268600--Sobic007G017500 Sobic003G268600--Sobic008G066401 Sobic003G268600--Sobic003G064200 Sobic009G145500 Sobic009G145500 Sobic003G268600--Sobic009G145500 Sobic009G145700--Sobic009G145600 Sobic009G145700--Sobic008G066401 Sobic009G145700--Sobic008G066200 Sobic009G145700--Sobic006G008000 Sobic009G145700--Sobic001G112200 Sobic009G145700--Sobic003G043600 Sobic009G145700--Sobic003G043500 Sobic009G145700--Sobic009G184000 Sobic003G079200 Sobic003G079200 Sobic009G145700--Sobic003G079200 Sobic009G145600--Sobic009G145700 Sobic009G145600--Sobic008G066401 Sobic009G145600--Sobic008G066200 Sobic009G145600--Sobic003G079200 Sobic009G145600--Sobic006G008000 Sobic009G145600--Sobic003G043500 Sobic004G245700 Sobic004G245700 Sobic009G145600--Sobic004G245700 Sobic009G145600--Sobic002G012500 Sobic009G200566 Sobic009G200566 Sobic009G145600--Sobic009G200566 Sobic001G318700--Sobic001G112200 Sobic001G318700--Sobic001G018300 Sobic001G318700--Sobic004G243100 Sobic002G192000 Sobic002G192000 Sobic001G318700--Sobic002G192000 Sobic003G303100 Sobic003G303100 Sobic001G318700--Sobic003G303100 Sobic001G318700--Sobic002G251000 Sobic001G140900 Sobic001G140900 Sobic001G318700--Sobic001G140900 Sobic001G318700--Sobic006G075400 Sobic001G481100 Sobic001G481100 Sobic001G318700--Sobic001G481100 Sobic002G063800 Sobic002G063800 Sobic006G235000--Sobic002G063800 Sobic006G235000--Sobic009G145500 Sobic006G235000--Sobic009G145600 Sobic006G235000--Sobic003G268600 Sobic010G062300 Sobic010G062300 Sobic006G235000--Sobic010G062300 Sobic006G235000--Sobic009G184100 Sobic006G235000--Sobic005G086600 Sobic006G235000--Sobic003G079200 Sobic006G235000--Sobic006G008000
Octagon: transcription factors


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