Gene annotation
Transcriptome id Sobic.010G278000.1
Synonym Sb10g031140
Functional annotation expressed protein
UniProt C5Z2M2
Pfam PF12695
Panther DB PTHR12265 PTHR12265:SF0
NCBI CDD KOG2521; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19970 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g51390.2 : expressed protein
MaizeGDB (Corn) Zm00025a041674
Brachypodium KQK16598 , KQK16599 , KQK16589
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G278000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
2 Sobic.001G459200 MYB family transcription factor, putative, expressed -
3 Sobic.004G268200 expressed protein -
4 Sobic.009G203100 expressed protein -
5 Sobic.006G099700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine hydrolase domain containing protein, expressed -
6 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
7 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
8 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
9 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
10 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
11 Sobic.001G095300 prenylated rab acceptor, putative, expressed -
12 Sobic.004G339300 ABC transporter, ATP-binding protein, putative, expressed K12608: CCR4-NOT complex subunit CAF16
13 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
14 Sobic.010G199100 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.006G180600 expressed protein -
16 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
17 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
18 Sobic.001G304700 proline oxidase, mitochondrial precursor, putative, expressed K00318: PRODH, fadM, proline dehydrogenase
19 Sobic.008G025500 DUF567 domain containing protein, putative, expressed -
20 Sobic.002G312400 domain of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic010G278000 Sobic010G278000 Sobic005G028700 Sobic005G028700 Sobic010G278000--Sobic005G028700 Sobic001G459200 Sobic001G459200 Sobic010G278000--Sobic001G459200 Sobic004G268200 Sobic004G268200 Sobic010G278000--Sobic004G268200 Sobic009G203100 Sobic009G203100 Sobic010G278000--Sobic009G203100 Sobic006G099700 Sobic006G099700 Sobic010G278000--Sobic006G099700 Sobic002G046100 Sobic002G046100 Sobic010G278000--Sobic002G046100 Sobic009G023200 Sobic009G023200 Sobic010G278000--Sobic009G023200 Sobic003G181500 Sobic003G181500 Sobic010G278000--Sobic003G181500 Sobic003G130800 Sobic003G130800 Sobic010G278000--Sobic003G130800 Sobic003G063200 Sobic003G063200 Sobic005G028700--Sobic003G063200 Sobic009G129000 Sobic009G129000 Sobic005G028700--Sobic009G129000 Sobic010G086200 Sobic010G086200 Sobic005G028700--Sobic010G086200 Sobic004G065500 Sobic004G065500 Sobic005G028700--Sobic004G065500 Sobic004G247200 Sobic004G247200 Sobic005G028700--Sobic004G247200 Sobic007G151100 Sobic007G151100 Sobic005G028700--Sobic007G151100 Sobic002G356101 Sobic002G356101 Sobic005G028700--Sobic002G356101 Sobic001G477300 Sobic001G477300 Sobic005G028700--Sobic001G477300 Sobic004G306300 Sobic004G306300 Sobic005G028700--Sobic004G306300 Sobic009G185800 Sobic009G185800 Sobic001G459200--Sobic009G185800 Sobic003G253000 Sobic003G253000 Sobic001G459200--Sobic003G253000 Sobic001G499300 Sobic001G499300 Sobic001G459200--Sobic001G499300 Sobic004G055200 Sobic004G055200 Sobic001G459200--Sobic004G055200 Sobic002G267500 Sobic002G267500 Sobic001G459200--Sobic002G267500 Sobic001G459200--Sobic002G046100 Sobic004G272800 Sobic004G272800 Sobic001G459200--Sobic004G272800 Sobic001G459200--Sobic003G181500 Sobic001G459200--Sobic003G130800 Sobic007G171000 Sobic007G171000 Sobic004G268200--Sobic007G171000 Sobic001G308700 Sobic001G308700 Sobic004G268200--Sobic001G308700 Sobic001G513300 Sobic001G513300 Sobic004G268200--Sobic001G513300 Sobic008G129000 Sobic008G129000 Sobic004G268200--Sobic008G129000 Sobic002G202300 Sobic002G202300 Sobic004G268200--Sobic002G202300 Sobic002G386800 Sobic002G386800 Sobic004G268200--Sobic002G386800 Sobic010G246000 Sobic010G246000 Sobic004G268200--Sobic010G246000 Sobic004G268200--Sobic005G028700 Sobic004G339300 Sobic004G339300 Sobic004G268200--Sobic004G339300 Sobic009G203100--Sobic001G459200 Sobic002G204100 Sobic002G204100 Sobic009G203100--Sobic002G204100 Sobic009G203100--Sobic009G185800 Sobic009G203100--Sobic003G253000 Sobic009G203100--Sobic004G055200 Sobic001G040800 Sobic001G040800 Sobic009G203100--Sobic001G040800 Sobic004G330700 Sobic004G330700 Sobic009G203100--Sobic004G330700 Sobic005G034400 Sobic005G034400 Sobic009G203100--Sobic005G034400 Sobic002G045300 Sobic002G045300 Sobic009G203100--Sobic002G045300 Sobic008G025500 Sobic008G025500 Sobic006G099700--Sobic008G025500 Sobic007G088000 Sobic007G088000 Sobic006G099700--Sobic007G088000 Sobic010G232100 Sobic010G232100 Sobic006G099700--Sobic010G232100 Sobic010G165500 Sobic010G165500 Sobic006G099700--Sobic010G165500 Sobic001G393500 Sobic001G393500 Sobic006G099700--Sobic001G393500 Sobic006G099700--Sobic004G330700 Sobic003G279300 Sobic003G279300 Sobic006G099700--Sobic003G279300 Sobic006G099700--Sobic001G499300 Sobic004G187900 Sobic004G187900 Sobic006G099700--Sobic004G187900 Sobic003G285800 Sobic003G285800 Sobic002G046100--Sobic003G285800 Sobic001G281400 Sobic001G281400 Sobic002G046100--Sobic001G281400 Sobic002G345300 Sobic002G345300 Sobic002G046100--Sobic002G345300 Sobic002G187500 Sobic002G187500 Sobic002G046100--Sobic002G187500 Sobic002G046100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G046100--Sobic004G061200 Sobic002G046100--Sobic001G477300 Sobic002G046100--Sobic002G267500 Sobic002G190900 Sobic002G190900 Sobic002G046100--Sobic002G190900 Sobic009G023200--Sobic004G187900 Sobic010G204600 Sobic010G204600 Sobic009G023200--Sobic010G204600 Sobic009G023200--Sobic003G063200 Sobic001G067601 Sobic001G067601 Sobic009G023200--Sobic001G067601 Sobic009G023200--Sobic002G046100 Sobic002G245800 Sobic002G245800 Sobic009G023200--Sobic002G245800 Sobic009G023200--Sobic003G181500 Sobic003G202200 Sobic003G202200 Sobic009G023200--Sobic003G202200 Sobic005G196800 Sobic005G196800 Sobic009G023200--Sobic005G196800 Sobic003G181500--Sobic004G187900 Sobic003G350300 Sobic003G350300 Sobic003G181500--Sobic003G350300 Sobic010G149300 Sobic010G149300 Sobic003G181500--Sobic010G149300 Sobic003G249800 Sobic003G249800 Sobic003G181500--Sobic003G249800 Sobic001G288800 Sobic001G288800 Sobic003G181500--Sobic001G288800 Sobic003G181500--Sobic001G281400 Sobic003G181500--Sobic009G023200 Sobic002G211900 Sobic002G211900 Sobic003G181500--Sobic002G211900 Sobic003G181500--Sobic002G046100 Sobic003G130800--Sobic009G185800 Sobic003G130800--Sobic003G253000 Sobic003G130800--Sobic001G459200 Sobic006G180200 Sobic006G180200 Sobic003G130800--Sobic006G180200 Sobic003G130800--Sobic002G345300 Sobic004G049900 Sobic004G049900 Sobic003G130800--Sobic004G049900 Sobic003G130800--Sobic004G055200 Sobic010G135000 Sobic010G135000 Sobic003G130800--Sobic010G135000 Sobic003G130800--Sobic003G181500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.