Gene annotation
Transcriptome id Sobic.008G025500.1
Synonym Sb08g002230
Functional annotation DUF567 domain containing protein, putative, expressed
UniProt Q84YE3
Pfam PF04525
Panther DB PTHR31087 PTHR31087:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38640 : Protein of unknown function (DUF567)
RAP-DB (Rice) LOC_Os12g02720.1 : DUF567 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a029005 , Zm00025a033325 , Zm00025a028729
Brachypodium KQK10317 , KQJ92516 , KQK05705
Barley HORVU3Hr1G080430.1 , HORVU5Hr1G046200.1 , HORVU4Hr1G047270.1 , HORVU1Hr1G069180.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G099700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine hydrolase domain containing protein, expressed -
2 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
3 Sobic.007G088000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
4 Sobic.003G279500 serine acetyltransferase 1(PubMedID : 26465154)@serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
5 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
6 Sobic.003G377900 chitin-inducible gibberellin-responsive protein, putative, expressed -
7 Sobic.003G279300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoethanolamine/phosphocholine phosphatase, putative, expressed K06124: phosphoethanolamine/phosphocholine phosphatase
8 Sobic.003G288600 reticulon domain containing protein, putative, expressed -
9 Sobic.002G261100 expressed protein -
10 Sobic.001G393500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ca2+ sensors group(PubMedID : 30367619)@EF hand family protein, putative, expressed K02183: calmodulin
11 Sobic.003G321101 - -
12 Sobic.003G050400 phospholipase D, putative, expressed K01115: phospholipase D1/2
13 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
14 Sobic.001G482100 expressed protein -
15 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
16 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
17 Sobic.001G281400 expressed protein -
18 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
19 Sobic.009G046600 stress-related protein, putative, expressed -
20 Sobic.006G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein


Gene co-expression network
sample Sobic008G025500 Sobic008G025500 Sobic006G099700 Sobic006G099700 Sobic008G025500--Sobic006G099700 Sobic010G232100 Sobic010G232100 Sobic008G025500--Sobic010G232100 Sobic007G088000 Sobic007G088000 Sobic008G025500--Sobic007G088000 Sobic003G279500 Sobic003G279500 Sobic008G025500--Sobic003G279500 Sobic004G187900 Sobic004G187900 Sobic008G025500--Sobic004G187900 Sobic003G377900 Sobic003G377900 Sobic008G025500--Sobic003G377900 Sobic003G279300 Sobic003G279300 Sobic008G025500--Sobic003G279300 Sobic003G288600 Sobic003G288600 Sobic008G025500--Sobic003G288600 Sobic002G261100 Sobic002G261100 Sobic008G025500--Sobic002G261100 Sobic006G099700--Sobic008G025500 Sobic006G099700--Sobic007G088000 Sobic006G099700--Sobic010G232100 Sobic010G165500 Sobic010G165500 Sobic006G099700--Sobic010G165500 Sobic001G393500 Sobic001G393500 Sobic006G099700--Sobic001G393500 Sobic004G330700 Sobic004G330700 Sobic006G099700--Sobic004G330700 Sobic006G099700--Sobic003G279300 Sobic001G499300 Sobic001G499300 Sobic006G099700--Sobic001G499300 Sobic006G099700--Sobic004G187900 Sobic004G055200 Sobic004G055200 Sobic010G232100--Sobic004G055200 Sobic010G232100--Sobic008G025500 Sobic003G130800 Sobic003G130800 Sobic010G232100--Sobic003G130800 Sobic010G178200 Sobic010G178200 Sobic010G232100--Sobic010G178200 Sobic006G180200 Sobic006G180200 Sobic010G232100--Sobic006G180200 Sobic009G046600 Sobic009G046600 Sobic010G232100--Sobic009G046600 Sobic003G380000 Sobic003G380000 Sobic010G232100--Sobic003G380000 Sobic004G219300 Sobic004G219300 Sobic010G232100--Sobic004G219300 Sobic010G232100--Sobic006G099700 Sobic003G306100 Sobic003G306100 Sobic007G088000--Sobic003G306100 Sobic007G088000--Sobic004G055200 Sobic007G088000--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic007G088000--Sobic001G281400 Sobic009G141800 Sobic009G141800 Sobic007G088000--Sobic009G141800 Sobic001G040800 Sobic001G040800 Sobic007G088000--Sobic001G040800 Sobic001G459200 Sobic001G459200 Sobic007G088000--Sobic001G459200 Sobic007G088000--Sobic006G099700 Sobic007G088000--Sobic001G499300 Sobic007G074000 Sobic007G074000 Sobic003G279500--Sobic007G074000 Sobic003G228900 Sobic003G228900 Sobic003G279500--Sobic003G228900 Sobic001G138600 Sobic001G138600 Sobic003G279500--Sobic001G138600 Sobic007G169700 Sobic007G169700 Sobic003G279500--Sobic007G169700 Sobic009G184000 Sobic009G184000 Sobic003G279500--Sobic009G184000 Sobic004G237800 Sobic004G237800 Sobic003G279500--Sobic004G237800 Sobic001G112200 Sobic001G112200 Sobic003G279500--Sobic001G112200 Sobic004G141200 Sobic004G141200 Sobic003G279500--Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic003G279500--Sobic003G369100 Sobic004G187900--Sobic001G281400 Sobic001G124600 Sobic001G124600 Sobic004G187900--Sobic001G124600 Sobic002G140400 Sobic002G140400 Sobic004G187900--Sobic002G140400 Sobic004G187900--Sobic009G141800 Sobic004G321300 Sobic004G321300 Sobic004G187900--Sobic004G321300 Sobic003G350300 Sobic003G350300 Sobic004G187900--Sobic003G350300 Sobic009G008900 Sobic009G008900 Sobic004G187900--Sobic009G008900 Sobic001G477300 Sobic001G477300 Sobic004G187900--Sobic001G477300 Sobic008G136400 Sobic008G136400 Sobic004G187900--Sobic008G136400 Sobic010G031300 Sobic010G031300 Sobic003G377900--Sobic010G031300 Sobic006G267200 Sobic006G267200 Sobic003G377900--Sobic006G267200 Sobic008G033600 Sobic008G033600 Sobic003G377900--Sobic008G033600 Sobic010G149300 Sobic010G149300 Sobic003G377900--Sobic010G149300 Sobic001G397200 Sobic001G397200 Sobic003G377900--Sobic001G397200 Sobic006G127900 Sobic006G127900 Sobic003G377900--Sobic006G127900 Sobic001G405500 Sobic001G405500 Sobic003G377900--Sobic001G405500 Sobic003G086600 Sobic003G086600 Sobic003G377900--Sobic003G086600 Sobic004G280200 Sobic004G280200 Sobic003G377900--Sobic004G280200 Sobic003G279300--Sobic001G393500 Sobic003G279300--Sobic003G279500 Sobic009G184100 Sobic009G184100 Sobic003G279300--Sobic009G184100 Sobic008G066401 Sobic008G066401 Sobic003G279300--Sobic008G066401 Sobic003G268600 Sobic003G268600 Sobic003G279300--Sobic003G268600 Sobic009G145700 Sobic009G145700 Sobic003G279300--Sobic009G145700 Sobic009G145600 Sobic009G145600 Sobic003G279300--Sobic009G145600 Sobic001G318700 Sobic001G318700 Sobic003G279300--Sobic001G318700 Sobic006G235000 Sobic006G235000 Sobic003G279300--Sobic006G235000 Sobic003G288600--Sobic006G267200 Sobic010G217800 Sobic010G217800 Sobic003G288600--Sobic010G217800 Sobic010G220200 Sobic010G220200 Sobic003G288600--Sobic010G220200 Sobic006G231100 Sobic006G231100 Sobic003G288600--Sobic006G231100 Sobic008G177800 Sobic008G177800 Sobic003G288600--Sobic008G177800 Sobic003G288600--Sobic009G141800 Sobic002G415600 Sobic002G415600 Sobic003G288600--Sobic002G415600 Sobic003G288600--Sobic001G477300 Sobic005G103300 Sobic005G103300 Sobic003G288600--Sobic005G103300 Sobic003G367200 Sobic003G367200 Sobic002G261100--Sobic003G367200 Sobic002G261100--Sobic004G280200 Sobic002G261200 Sobic002G261200 Sobic002G261100--Sobic002G261200 Sobic006G056400 Sobic006G056400 Sobic002G261100--Sobic006G056400 Sobic002G261100--Sobic001G112200 Sobic010G166500 Sobic010G166500 Sobic002G261100--Sobic010G166500 Sobic003G334600 Sobic003G334600 Sobic002G261100--Sobic003G334600 Sobic002G261100--Sobic001G138600 Sobic002G224500 Sobic002G224500 Sobic002G261100--Sobic002G224500
Octagon: transcription factors


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