Gene annotation
| Transcriptome id | Sobic.003G076900.1 |
|---|---|
| Synonym | Sb03g006480, SQD2 |
| Functional annotation | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543) "Sulfoquinovosyldiacylglycerol 2, UDP-glycosyltransferase SQD2 (At)" (PubMedID : 27208977) glycosyl transferase, group 1 domain containing protein, expressed |
| UniProt | C5XQ46 |
| Pfam | PF13579 PF00534 |
| Panther DB | PTHR12526 PTHR12526:SF372 |
| NCBI CDD | KOG1111; N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase |
| KEGG Orthology | K06119; sulfoquinovosyltransferase |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT5G01220 : sulfoquinovosyldiacylglycerol 2 |
|---|---|
| RAP-DB (Rice) | LOC_Os01g04920.1 : glycosyl transferase, group 1 domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a035601 |
| Brachypodium | KQK02636 |
| Barley | - |
| Wheat | TraesCS3D02G055400 , TraesCS3B02G067900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G211900 | mapped into a stay green mQTL (QSTG meta2.7)(PubMedID : 24655390)@"1,2-diacylglycerol 3-beta-galactosyltransferase MGD2 (At)"(PubMedID : 27208977)@MGD2, putative, expressed | K03715: 1,2-diacylglycerol 3-beta-galactosyltransferase |
| 2 | Sobic.010G185200 | SPX domain containing protein, putative, expressed | - |
| 3 | Sobic.004G084900 | SPX domain containing protein, putative, expressed | - |
| 4 | Sobic.010G211400 | OsRCI2-9 - Putative low temperature and salt responsive protein, expressed | - |
| 5 | Sobic.001G504100 | - | - |
| 6 | Sobic.001G442300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed | K14379: tartrate-resistant acid phosphatase type 5 |
| 7 | Sobic.010G083500 | pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed | K17872: NDC1, demethylphylloquinone reductase |
| 8 | Sobic.010G165500 | ABC-2 type transporter, putative, expressed | - |
| 9 | Sobic.001G027300 | haloacid dehalogenase-like hydrolase family protein, putative, expressed | - |
| 10 | Sobic.001G342400 | SPX domain-3("PubMedID : 26759170,PubMedID : 24597475")@SPX domain-containing protein, putative, expressed | - |
| 11 | Sobic.006G078100 | FAD binding domain containing protein, expressed | - |
| 12 | Sobic.006G099700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine hydrolase domain containing protein, expressed | - |
| 13 | Sobic.003G183600 | Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@SPX domain-containing protein, putative, expressed | - |
| 14 | Sobic.001G224000 | receptor-like protein kinase precursor, putative, expressed | - |
| 15 | Sobic.004G009800 | - | - |
| 16 | Sobic.006G234466 | - | - |
| 17 | Sobic.003G321101 | - | - |
| 18 | Sobic.001G234900 | inorganic phosphate transporter, putative, expressed | K08176: MFS transporter, PHS family, inorganic phosphate transporter |
| 19 | Sobic.002G431100 | OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed | K00434: L-ascorbate peroxidase |
| 20 | Sobic.008G025500 | DUF567 domain containing protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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