Gene annotation
Transcriptome id Sobic.002G431100.1
Synonym MEE6, ATAPX01, ATAPX1, Sb02g044060, APX1, CS1
Functional annotation OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed
UniProt C5X6H6
Pfam PF00141
Panther DB PTHR31356 PTHR31356:SF10
NCBI CDD -
KEGG Orthology K00434; L-ascorbate peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT1G07890 : ascorbate peroxidase 1
RAP-DB (Rice) LOC_Os07g49400.2 : OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed
MaizeGDB (Corn) Zm00025a015527
Brachypodium KQK14466
Barley -
Wheat TraesCS4A02G106300 , TraesCS4A02G106300 , TraesCS2B02G096200 , TraesCS4B02G197900 , TraesCS4B02G197900 , TraesCS2A02G082100 , TraesCS2D02G080000 , TraesCS4D02G198500
Populus -


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cDNA sequences
Sobic.002G431100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G194900 phosphoserine phosphatase, chloroplast precursor, putative, expressed K01079: serB, phosphoserine phosphatase
2 Sobic.006G276700 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
3 Sobic.004G162000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
4 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
5 Sobic.004G282700 synthase, putative, expressed K12451: 3,5-epimerase/4-reductase
6 Sobic.003G336000 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed K15633: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
7 Sobic.010G185200 SPX domain containing protein, putative, expressed -
8 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
9 Sobic.004G297700 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
10 Sobic.005G196300 transporter family protein, putative, expressed -
11 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
12 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit
13 Sobic.007G114200 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
14 Sobic.002G355300 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
15 Sobic.009G217900 expressed protein K06875: PDCD5, programmed cell death protein 5
16 Sobic.003G327900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
17 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
18 Sobic.007G137600 NADP-dependent malate dehydrogenase(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
19 Sobic.001G301800 CS domain containing protein, putative, expressed -
20 Sobic.003G391900 Divergent PAP2 family domain containing protein, expressed K09775: uncharacterized protein


Gene co-expression network
sample Sobic002G431100 Sobic002G431100 Sobic005G194900 Sobic005G194900 Sobic002G431100--Sobic005G194900 Sobic006G276700 Sobic006G276700 Sobic002G431100--Sobic006G276700 Sobic004G162000 Sobic004G162000 Sobic002G431100--Sobic004G162000 Sobic001G031900 Sobic001G031900 Sobic002G431100--Sobic001G031900 Sobic004G282700 Sobic004G282700 Sobic002G431100--Sobic004G282700 Sobic003G336000 Sobic003G336000 Sobic002G431100--Sobic003G336000 Sobic010G185200 Sobic010G185200 Sobic002G431100--Sobic010G185200 Sobic006G058900 Sobic006G058900 Sobic002G431100--Sobic006G058900 Sobic004G297700 Sobic004G297700 Sobic002G431100--Sobic004G297700 Sobic005G194900--Sobic004G282700 Sobic005G194900--Sobic002G431100 Sobic009G236100 Sobic009G236100 Sobic005G194900--Sobic009G236100 Sobic007G147800 Sobic007G147800 Sobic005G194900--Sobic007G147800 Sobic003G428300 Sobic003G428300 Sobic005G194900--Sobic003G428300 Sobic010G187500 Sobic010G187500 Sobic005G194900--Sobic010G187500 Sobic004G213200 Sobic004G213200 Sobic005G194900--Sobic004G213200 Sobic005G194900--Sobic004G162000 Sobic007G047300 Sobic007G047300 Sobic005G194900--Sobic007G047300 Sobic006G276700--Sobic004G297700 Sobic001G282500 Sobic001G282500 Sobic006G276700--Sobic001G282500 Sobic010G032600 Sobic010G032600 Sobic006G276700--Sobic010G032600 Sobic001G073600 Sobic001G073600 Sobic006G276700--Sobic001G073600 Sobic002G395000 Sobic002G395000 Sobic006G276700--Sobic002G395000 Sobic003G135600 Sobic003G135600 Sobic006G276700--Sobic003G135600 Sobic004G202100 Sobic004G202100 Sobic006G276700--Sobic004G202100 Sobic007G023400 Sobic007G023400 Sobic006G276700--Sobic007G023400 Sobic007G171500 Sobic007G171500 Sobic006G276700--Sobic007G171500 Sobic002G078300 Sobic002G078300 Sobic004G162000--Sobic002G078300 Sobic001G095632 Sobic001G095632 Sobic004G162000--Sobic001G095632 Sobic003G305100 Sobic003G305100 Sobic004G162000--Sobic003G305100 Sobic002G263100 Sobic002G263100 Sobic004G162000--Sobic002G263100 Sobic004G162000--Sobic005G194900 Sobic002G309700 Sobic002G309700 Sobic004G162000--Sobic002G309700 Sobic005G168100 Sobic005G168100 Sobic004G162000--Sobic005G168100 Sobic001G087900 Sobic001G087900 Sobic004G162000--Sobic001G087900 Sobic004G162000--Sobic002G431100 Sobic001G031900--Sobic006G058900 Sobic001G031900--Sobic004G202100 Sobic001G031900--Sobic002G395000 Sobic001G350600 Sobic001G350600 Sobic001G031900--Sobic001G350600 Sobic004G344800 Sobic004G344800 Sobic001G031900--Sobic004G344800 Sobic003G152900 Sobic003G152900 Sobic001G031900--Sobic003G152900 Sobic004G170400 Sobic004G170400 Sobic001G031900--Sobic004G170400 Sobic001G458800 Sobic001G458800 Sobic001G031900--Sobic001G458800 Sobic004G030000 Sobic004G030000 Sobic001G031900--Sobic004G030000 Sobic003G170300 Sobic003G170300 Sobic004G282700--Sobic003G170300 Sobic010G264300 Sobic010G264300 Sobic004G282700--Sobic010G264300 Sobic002G180300 Sobic002G180300 Sobic004G282700--Sobic002G180300 Sobic001G096100 Sobic001G096100 Sobic004G282700--Sobic001G096100 Sobic002G356400 Sobic002G356400 Sobic004G282700--Sobic002G356400 Sobic001G304400 Sobic001G304400 Sobic004G282700--Sobic001G304400 Sobic006G038200 Sobic006G038200 Sobic004G282700--Sobic006G038200 Sobic004G282700--Sobic005G194900 Sobic008G132400 Sobic008G132400 Sobic004G282700--Sobic008G132400 Sobic010G027000 Sobic010G027000 Sobic003G336000--Sobic010G027000 Sobic002G355300 Sobic002G355300 Sobic003G336000--Sobic002G355300 Sobic001G503500 Sobic001G503500 Sobic003G336000--Sobic001G503500 Sobic009G217900 Sobic009G217900 Sobic003G336000--Sobic009G217900 Sobic004G058200 Sobic004G058200 Sobic003G336000--Sobic004G058200 Sobic010G026925 Sobic010G026925 Sobic003G336000--Sobic010G026925 Sobic007G114200 Sobic007G114200 Sobic003G336000--Sobic007G114200 Sobic004G352500 Sobic004G352500 Sobic003G336000--Sobic004G352500 Sobic001G301800 Sobic001G301800 Sobic003G336000--Sobic001G301800 Sobic003G183600 Sobic003G183600 Sobic010G185200--Sobic003G183600 Sobic001G342400 Sobic001G342400 Sobic010G185200--Sobic001G342400 Sobic006G086700 Sobic006G086700 Sobic010G185200--Sobic006G086700 Sobic001G234900 Sobic001G234900 Sobic010G185200--Sobic001G234900 Sobic001G504100 Sobic001G504100 Sobic010G185200--Sobic001G504100 Sobic003G327900 Sobic003G327900 Sobic010G185200--Sobic003G327900 Sobic003G076900 Sobic003G076900 Sobic010G185200--Sobic003G076900 Sobic006G122800 Sobic006G122800 Sobic010G185200--Sobic006G122800 Sobic001G379400 Sobic001G379400 Sobic010G185200--Sobic001G379400 Sobic006G058900--Sobic001G031900 Sobic006G058900--Sobic001G458800 Sobic006G058900--Sobic004G202100 Sobic006G058900--Sobic002G395000 Sobic006G058900--Sobic007G171500 Sobic002G309500 Sobic002G309500 Sobic006G058900--Sobic002G309500 Sobic006G058900--Sobic004G344800 Sobic003G034900 Sobic003G034900 Sobic006G058900--Sobic003G034900 Sobic003G185500 Sobic003G185500 Sobic006G058900--Sobic003G185500 Sobic004G297700--Sobic007G171500 Sobic004G297700--Sobic010G032600 Sobic004G297700--Sobic006G276700 Sobic002G186300 Sobic002G186300 Sobic004G297700--Sobic002G186300 Sobic004G244000 Sobic004G244000 Sobic004G297700--Sobic004G244000 Sobic004G297700--Sobic007G023400 Sobic001G457000 Sobic001G457000 Sobic004G297700--Sobic001G457000 Sobic004G297700--Sobic004G202100 Sobic004G297700--Sobic003G034900
Octagon: transcription factors


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