Gene annotation
Transcriptome id Sobic.003G327900.1
Synonym Sb03g037390
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
auxin-induced protein 5NG4, putative, expressed
UniProt C5XMI4
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G07050 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os01g58910.1 : auxin-induced protein 5NG4, putative, expressed
MaizeGDB (Corn) Zm00025a044083 , Zm00025a037448 , Zm00025a037839 , Zm00025a027171
Brachypodium PNT73049 , KQK05599 , KQK05627 , KQK05635 , KQK06283
Barley HORVU5Hr1G044210.2 , HORVU5Hr1G044210.1 , HORVU5Hr1G044210.4 , HORVU5Hr1G044210.3 , HORVU1Hr1G063340.5 , HORVU1Hr1G063340.2 , HORVU1Hr1G063340.1 , HORVU0Hr1G023720.4 , HORVU0Hr1G023720.5 , HORVU0Hr1G023720.6 , HORVU0Hr1G023720.7 , HORVU0Hr1G023720.1 , HORVU0Hr1G023720.2 , HORVU0Hr1G023720.3 , HORVU0Hr1G023720.8 , HORVU0Hr1G023720.9 , HORVU3Hr1G078710.2 , HORVU3Hr1G078710.3 , HORVU3Hr1G078710.1 , HORVU3Hr1G078710.4 , HORVU3Hr1G078710.5 , HORVU1Hr1G063340.4 , HORVU1Hr1G068120.2 , HORVU1Hr1G068120.3 , HORVU1Hr1G068120.1
Wheat TraesCS3D02G325400 , TraesCS3B02G362000 , TraesCS1B02G321500 , TraesCS1A02G310300 , TraesCS3A02G331900 , TraesCS1D02G309800 , TraesCS1A02G256700 , TraesCS1D02G256100 , TraesCS1B02G267300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
2 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
6 Sobic.007G090469 - -
7 Sobic.004G209400 carbonyl reductase 3, putative, expressed -
8 Sobic.002G261500 AIR12, putative, expressed -
9 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
10 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
11 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
12 Sobic.004G322800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.001G238300 expansin precursor, putative, expressed -
14 Sobic.009G109000 expressed protein -
15 Sobic.003G119500 expressed protein -
16 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
17 Sobic.005G066100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
19 Sobic.009G074500 expressed protein -
20 Sobic.002G425000 VQ domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G327900 Sobic003G327900 Sobic002G042200 Sobic002G042200 Sobic003G327900--Sobic002G042200 Sobic010G270700 Sobic010G270700 Sobic003G327900--Sobic010G270700 SobicK026900 SobicK026900 Sobic003G327900--SobicK026900 Sobic004G297900 Sobic004G297900 Sobic003G327900--Sobic004G297900 Sobic004G202400 Sobic004G202400 Sobic003G327900--Sobic004G202400 Sobic007G090469 Sobic007G090469 Sobic003G327900--Sobic007G090469 Sobic004G209400 Sobic004G209400 Sobic003G327900--Sobic004G209400 Sobic002G261500 Sobic002G261500 Sobic003G327900--Sobic002G261500 Sobic002G183700 Sobic002G183700 Sobic003G327900--Sobic002G183700 Sobic006G197100 Sobic006G197100 Sobic002G042200--Sobic006G197100 Sobic004G139300 Sobic004G139300 Sobic002G042200--Sobic004G139300 Sobic002G042200--Sobic002G261500 Sobic005G065900 Sobic005G065900 Sobic002G042200--Sobic005G065900 Sobic010G148800 Sobic010G148800 Sobic002G042200--Sobic010G148800 Sobic002G042200--Sobic004G202400 Sobic003G157600 Sobic003G157600 Sobic002G042200--Sobic003G157600 Sobic006G251400 Sobic006G251400 Sobic002G042200--Sobic006G251400 Sobic002G042200--Sobic004G209400 Sobic003G282100 Sobic003G282100 Sobic010G270700--Sobic003G282100 Sobic008G009400 Sobic008G009400 Sobic010G270700--Sobic008G009400 Sobic001G330300 Sobic001G330300 Sobic010G270700--Sobic001G330300 Sobic010G270700--SobicK026900 Sobic010G270700--Sobic004G297900 Sobic003G299300 Sobic003G299300 Sobic010G270700--Sobic003G299300 Sobic008G127933 Sobic008G127933 Sobic010G270700--Sobic008G127933 Sobic003G311800 Sobic003G311800 Sobic010G270700--Sobic003G311800 Sobic009G109000 Sobic009G109000 Sobic010G270700--Sobic009G109000 SobicK026900--Sobic004G297900 SobicK026900--Sobic007G090469 Sobic001G238300 Sobic001G238300 SobicK026900--Sobic001G238300 Sobic006G202600 Sobic006G202600 SobicK026900--Sobic006G202600 SobicK026900--Sobic004G202400 Sobic002G425000 Sobic002G425000 SobicK026900--Sobic002G425000 SobicK026900--Sobic010G270700 Sobic001G237900 Sobic001G237900 SobicK026900--Sobic001G237900 Sobic004G295100 Sobic004G295100 SobicK026900--Sobic004G295100 Sobic004G297900--Sobic003G311800 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic004G297900--Sobic001G238300 Sobic004G297900--Sobic004G295100 Sobic001G300500 Sobic001G300500 Sobic004G297900--Sobic001G300500 Sobic004G297900--Sobic009G109000 Sobic004G297900--Sobic002G261500 Sobic004G297900--SobicK026900 Sobic004G202400--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic004G202400--Sobic001G416200 Sobic004G202400--Sobic001G237900 Sobic004G202400--SobicK026900 Sobic004G202400--Sobic003G157600 Sobic004G349125 Sobic004G349125 Sobic004G202400--Sobic004G349125 Sobic004G042000 Sobic004G042000 Sobic004G202400--Sobic004G042000 Sobic004G202400--Sobic002G042200 Sobic004G202400--Sobic003G311800 Sobic006G172601 Sobic006G172601 Sobic007G090469--Sobic006G172601 Sobic007G090469--Sobic004G297900 Sobic007G090469--Sobic003G311800 Sobic007G090469--SobicK026900 Sobic007G090469--Sobic001G238300 Sobic007G090469--Sobic004G209400 Sobic007G090469--Sobic004G295100 Sobic005G156500 Sobic005G156500 Sobic007G090469--Sobic005G156500 Sobic007G090469--Sobic001G300500 Sobic003G140700 Sobic003G140700 Sobic004G209400--Sobic003G140700 Sobic001G438200 Sobic001G438200 Sobic004G209400--Sobic001G438200 Sobic009G219200 Sobic009G219200 Sobic004G209400--Sobic009G219200 Sobic004G209400--Sobic002G183700 Sobic002G255000 Sobic002G255000 Sobic004G209400--Sobic002G255000 Sobic001G058300 Sobic001G058300 Sobic004G209400--Sobic001G058300 Sobic004G209400--Sobic007G090469 Sobic004G209400--Sobic002G042200 Sobic003G282200 Sobic003G282200 Sobic004G209400--Sobic003G282200 Sobic002G261500--Sobic001G238300 Sobic002G261500--Sobic002G425000 Sobic002G261500--Sobic004G297900 Sobic010G212500 Sobic010G212500 Sobic002G261500--Sobic010G212500 Sobic002G261500--Sobic002G042200 Sobic003G053400 Sobic003G053400 Sobic002G261500--Sobic003G053400 Sobic007G050200 Sobic007G050200 Sobic002G261500--Sobic007G050200 Sobic001G379400 Sobic001G379400 Sobic002G261500--Sobic001G379400 Sobic006G260200 Sobic006G260200 Sobic002G261500--Sobic006G260200 Sobic007G158800 Sobic007G158800 Sobic002G183700--Sobic007G158800 Sobic004G029100 Sobic004G029100 Sobic002G183700--Sobic004G029100 Sobic001G502000 Sobic001G502000 Sobic002G183700--Sobic001G502000 Sobic002G183700--Sobic003G140700 Sobic006G089000 Sobic006G089000 Sobic002G183700--Sobic006G089000 Sobic006G274933 Sobic006G274933 Sobic002G183700--Sobic006G274933 Sobic006G225500 Sobic006G225500 Sobic002G183700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic002G183700--Sobic004G322100 Sobic002G183700--Sobic003G311800
Octagon: transcription factors


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