Gene annotation
Transcriptome id Sobic.010G185200.1
Synonym ATSPX2, Sb10g023590, SPX2
Functional annotation SPX domain containing protein, putative, expressed
UniProt C5Z5N3
Pfam PF03105
Panther DB PTHR10783 PTHR10783:SF44
NCBI CDD KOG1161; Protein involved in vacuolar polyphosphate accumulation, contains SPX domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G20150 : SPX domain gene 1
RAP-DB (Rice) LOC_Os06g40120.1 : SPX domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a034612 , Zm00025a051282
Brachypodium -
Barley -
Wheat TraesCS7B02G277700 , TraesCS7A02G376200 , TraesCS7D02G372600
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G185200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G183600 Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@SPX domain-containing protein, putative, expressed -
2 Sobic.001G342400 SPX domain-3("PubMedID : 26759170,PubMedID : 24597475")@SPX domain-containing protein, putative, expressed -
3 Sobic.006G086700 protein kinase family protein, putative, expressed -
4 Sobic.001G234900 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
5 Sobic.001G504100 - -
6 Sobic.003G327900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
7 Sobic.003G076900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Sulfoquinovosyldiacylglycerol 2, UDP-glycosyltransferase SQD2 (At)"(PubMedID : 27208977)@glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
8 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
9 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.006G078100 FAD binding domain containing protein, expressed -
11 Sobic.001G027300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
12 Sobic.008G147900 phosphoribosyl transferase, putative, expressed K00759: APRT, adenine phosphoribosyltransferase
13 Sobic.009G074500 expressed protein -
14 Sobic.010G147200 aluminum-activated malate transporter, putative, expressed -
15 Sobic.004G322800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.003G337600 WRKY116, expressed -
17 Sobic.002G431100 OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed K00434: L-ascorbate peroxidase
18 Sobic.005G160700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.001G442300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
20 Sobic.004G234100 phosphoglycerate mutase, putative, expressed -


Gene co-expression network
sample Sobic010G185200 Sobic010G185200 Sobic003G183600 Sobic003G183600 Sobic010G185200--Sobic003G183600 Sobic001G342400 Sobic001G342400 Sobic010G185200--Sobic001G342400 Sobic006G086700 Sobic006G086700 Sobic010G185200--Sobic006G086700 Sobic001G234900 Sobic001G234900 Sobic010G185200--Sobic001G234900 Sobic001G504100 Sobic001G504100 Sobic010G185200--Sobic001G504100 Sobic003G327900 Sobic003G327900 Sobic010G185200--Sobic003G327900 Sobic003G076900 Sobic003G076900 Sobic010G185200--Sobic003G076900 Sobic006G122800 Sobic006G122800 Sobic010G185200--Sobic006G122800 Sobic001G379400 Sobic001G379400 Sobic010G185200--Sobic001G379400 Sobic003G183600--Sobic001G342400 Sobic003G183600--Sobic001G234900 Sobic003G183600--Sobic001G379400 Sobic002G101400 Sobic002G101400 Sobic003G183600--Sobic002G101400 Sobic006G251400 Sobic006G251400 Sobic003G183600--Sobic006G251400 Sobic004G322800 Sobic004G322800 Sobic003G183600--Sobic004G322800 Sobic010G147200 Sobic010G147200 Sobic003G183600--Sobic010G147200 Sobic003G183600--Sobic006G122800 Sobic003G053600 Sobic003G053600 Sobic003G183600--Sobic003G053600 Sobic001G342400--Sobic001G234900 Sobic002G391800 Sobic002G391800 Sobic001G342400--Sobic002G391800 Sobic006G234466 Sobic006G234466 Sobic001G342400--Sobic006G234466 Sobic001G342400--Sobic001G504100 Sobic001G342400--Sobic001G379400 Sobic001G342400--Sobic003G183600 Sobic006G089000 Sobic006G089000 Sobic001G342400--Sobic006G089000 Sobic001G342400--Sobic010G147200 Sobic010G045500 Sobic010G045500 Sobic001G342400--Sobic010G045500 Sobic006G086700--Sobic003G183600 Sobic004G316500 Sobic004G316500 Sobic006G086700--Sobic004G316500 Sobic001G183700 Sobic001G183700 Sobic006G086700--Sobic001G183700 Sobic006G086700--Sobic002G101400 Sobic010G113100 Sobic010G113100 Sobic006G086700--Sobic010G113100 Sobic005G063400 Sobic005G063400 Sobic006G086700--Sobic005G063400 Sobic003G384700 Sobic003G384700 Sobic006G086700--Sobic003G384700 Sobic006G086700--Sobic010G185200 Sobic008G164450 Sobic008G164450 Sobic006G086700--Sobic008G164450 Sobic001G234900--Sobic001G342400 Sobic001G234900--Sobic001G379400 Sobic001G234900--Sobic002G391800 Sobic001G234900--Sobic010G147200 Sobic001G234900--Sobic006G089000 Sobic001G234900--Sobic003G183600 Sobic005G160700 Sobic005G160700 Sobic001G234900--Sobic005G160700 Sobic001G242100 Sobic001G242100 Sobic001G234900--Sobic001G242100 Sobic001G502000 Sobic001G502000 Sobic001G234900--Sobic001G502000 Sobic001G504100--Sobic001G342400 Sobic001G504100--Sobic006G234466 Sobic001G504100--Sobic001G234900 Sobic001G504100--Sobic002G391800 Sobic005G222500 Sobic005G222500 Sobic001G504100--Sobic005G222500 Sobic010G211400 Sobic010G211400 Sobic001G504100--Sobic010G211400 Sobic002G301900 Sobic002G301900 Sobic001G504100--Sobic002G301900 Sobic010G270700 Sobic010G270700 Sobic001G504100--Sobic010G270700 Sobic001G504100--Sobic006G089000 Sobic002G042200 Sobic002G042200 Sobic003G327900--Sobic002G042200 Sobic003G327900--Sobic010G270700 SobicK026900 SobicK026900 Sobic003G327900--SobicK026900 Sobic004G297900 Sobic004G297900 Sobic003G327900--Sobic004G297900 Sobic004G202400 Sobic004G202400 Sobic003G327900--Sobic004G202400 Sobic007G090469 Sobic007G090469 Sobic003G327900--Sobic007G090469 Sobic004G209400 Sobic004G209400 Sobic003G327900--Sobic004G209400 Sobic002G261500 Sobic002G261500 Sobic003G327900--Sobic002G261500 Sobic002G183700 Sobic002G183700 Sobic003G327900--Sobic002G183700 Sobic007G211900 Sobic007G211900 Sobic003G076900--Sobic007G211900 Sobic003G076900--Sobic010G185200 Sobic004G084900 Sobic004G084900 Sobic003G076900--Sobic004G084900 Sobic003G076900--Sobic010G211400 Sobic003G076900--Sobic001G504100 Sobic001G442300 Sobic001G442300 Sobic003G076900--Sobic001G442300 Sobic010G083500 Sobic010G083500 Sobic003G076900--Sobic010G083500 Sobic010G165500 Sobic010G165500 Sobic003G076900--Sobic010G165500 Sobic001G027300 Sobic001G027300 Sobic003G076900--Sobic001G027300 Sobic006G122800--Sobic003G384700 Sobic006G122800--Sobic002G042200 Sobic002G425000 Sobic002G425000 Sobic006G122800--Sobic002G425000 Sobic002G053700 Sobic002G053700 Sobic006G122800--Sobic002G053700 Sobic006G122800--Sobic005G063400 Sobic010G161800 Sobic010G161800 Sobic006G122800--Sobic010G161800 Sobic006G260200 Sobic006G260200 Sobic006G122800--Sobic006G260200 Sobic006G174300 Sobic006G174300 Sobic006G122800--Sobic006G174300 Sobic006G122800--Sobic006G251400 Sobic001G379400--Sobic006G089000 Sobic001G379400--Sobic010G147200 Sobic001G379400--Sobic005G160700 Sobic006G277700 Sobic006G277700 Sobic001G379400--Sobic006G277700 Sobic006G079300 Sobic006G079300 Sobic001G379400--Sobic006G079300 Sobic001G379400--Sobic001G234900 Sobic003G337600 Sobic003G337600 Sobic001G379400--Sobic003G337600 Sobic001G379400--Sobic006G174300 Sobic006G003100 Sobic006G003100 Sobic001G379400--Sobic006G003100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.