Gene annotation
Transcriptome id Sobic.006G086700.1
Synonym Sb06g017260
Functional annotation protein kinase family protein, putative, expressed
UniProt A0A1B6PL06
Pfam PF04564 PF07714
Panther DB PTHR27003 PTHR27003:SF30
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G45910 : U-box domain-containing protein kinase family protein
RAP-DB (Rice) LOC_Os10g01060.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a011308
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G183600 Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@SPX domain-containing protein, putative, expressed -
2 Sobic.004G316500 tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
3 Sobic.001G183700 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
4 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
5 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
6 Sobic.005G063400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
7 Sobic.003G384700 pectinacetylesterase domain containing protein, expressed -
8 Sobic.010G185200 SPX domain containing protein, putative, expressed -
9 Sobic.008G164450 - -
10 Sobic.003G152200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G506800 exostosin family domain containing protein, expressed -
12 Sobic.004G009500 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
13 Sobic.003G389000 Os1bglu4 - beta-glucosidase-like protein without signal sequence, expressed K01188: beta-glucosidase
14 Sobic.005G072900 stress responsive protein, putative, expressed -
15 Sobic.010G214300 - -
16 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
17 Sobic.003G053600 hydrolase, alpha/beta fold family protein, putative, expressed -
18 Sobic.006G230300 similar to LOC Os04g54190: cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@similar to LOC.Os04g54190:cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
19 Sobic.003G015300 expressed protein -
20 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -


Gene co-expression network
sample Sobic006G086700 Sobic006G086700 Sobic003G183600 Sobic003G183600 Sobic006G086700--Sobic003G183600 Sobic004G316500 Sobic004G316500 Sobic006G086700--Sobic004G316500 Sobic001G183700 Sobic001G183700 Sobic006G086700--Sobic001G183700 Sobic002G101400 Sobic002G101400 Sobic006G086700--Sobic002G101400 Sobic010G113100 Sobic010G113100 Sobic006G086700--Sobic010G113100 Sobic005G063400 Sobic005G063400 Sobic006G086700--Sobic005G063400 Sobic003G384700 Sobic003G384700 Sobic006G086700--Sobic003G384700 Sobic010G185200 Sobic010G185200 Sobic006G086700--Sobic010G185200 Sobic008G164450 Sobic008G164450 Sobic006G086700--Sobic008G164450 Sobic001G342400 Sobic001G342400 Sobic003G183600--Sobic001G342400 Sobic001G234900 Sobic001G234900 Sobic003G183600--Sobic001G234900 Sobic001G379400 Sobic001G379400 Sobic003G183600--Sobic001G379400 Sobic003G183600--Sobic002G101400 Sobic006G251400 Sobic006G251400 Sobic003G183600--Sobic006G251400 Sobic004G322800 Sobic004G322800 Sobic003G183600--Sobic004G322800 Sobic010G147200 Sobic010G147200 Sobic003G183600--Sobic010G147200 Sobic006G122800 Sobic006G122800 Sobic003G183600--Sobic006G122800 Sobic003G053600 Sobic003G053600 Sobic003G183600--Sobic003G053600 Sobic004G009500 Sobic004G009500 Sobic004G316500--Sobic004G009500 Sobic001G067100 Sobic001G067100 Sobic004G316500--Sobic001G067100 Sobic004G316500--Sobic010G113100 Sobic007G047500 Sobic007G047500 Sobic004G316500--Sobic007G047500 Sobic002G361800 Sobic002G361800 Sobic004G316500--Sobic002G361800 Sobic002G042200 Sobic002G042200 Sobic004G316500--Sobic002G042200 Sobic004G316500--Sobic001G183700 Sobic004G316500--Sobic006G086700 Sobic001G360400 Sobic001G360400 Sobic004G316500--Sobic001G360400 Sobic010G070300 Sobic010G070300 Sobic001G183700--Sobic010G070300 Sobic001G183700--Sobic001G360400 Sobic001G183700--Sobic004G009500 Sobic003G015300 Sobic003G015300 Sobic001G183700--Sobic003G015300 Sobic001G183700--Sobic010G113100 Sobic001G375200 Sobic001G375200 Sobic001G183700--Sobic001G375200 Sobic003G152200 Sobic003G152200 Sobic001G183700--Sobic003G152200 Sobic001G183700--Sobic006G251400 Sobic002G385500 Sobic002G385500 Sobic001G183700--Sobic002G385500 Sobic002G101400--Sobic010G113100 Sobic001G360500 Sobic001G360500 Sobic002G101400--Sobic001G360500 Sobic005G046700 Sobic005G046700 Sobic002G101400--Sobic005G046700 Sobic006G092700 Sobic006G092700 Sobic002G101400--Sobic006G092700 Sobic007G170300 Sobic007G170300 Sobic002G101400--Sobic007G170300 Sobic002G101400--Sobic003G053600 Sobic007G073000 Sobic007G073000 Sobic002G101400--Sobic007G073000 Sobic007G057400 Sobic007G057400 Sobic002G101400--Sobic007G057400 Sobic010G028100 Sobic010G028100 Sobic002G101400--Sobic010G028100 Sobic010G113100--Sobic002G101400 Sobic010G113100--Sobic010G028100 Sobic010G113100--Sobic006G092700 Sobic010G113100--Sobic008G164450 Sobic006G135300 Sobic006G135300 Sobic010G113100--Sobic006G135300 Sobic010G113100--Sobic007G057400 Sobic002G216100 Sobic002G216100 Sobic010G113100--Sobic002G216100 Sobic001G506800 Sobic001G506800 Sobic010G113100--Sobic001G506800 Sobic010G113100--Sobic001G360500 Sobic005G063400--Sobic003G053600 Sobic002G053700 Sobic002G053700 Sobic005G063400--Sobic002G053700 Sobic004G009400 Sobic004G009400 Sobic005G063400--Sobic004G009400 Sobic005G063400--Sobic007G057400 Sobic005G063400--Sobic006G122800 Sobic005G063400--Sobic002G101400 Sobic006G277700 Sobic006G277700 Sobic005G063400--Sobic006G277700 Sobic009G088500 Sobic009G088500 Sobic005G063400--Sobic009G088500 Sobic006G174300 Sobic006G174300 Sobic005G063400--Sobic006G174300 Sobic003G384700--Sobic006G122800 Sobic003G157600 Sobic003G157600 Sobic003G384700--Sobic003G157600 Sobic003G384700--Sobic005G063400 Sobic001G147900 Sobic001G147900 Sobic003G384700--Sobic001G147900 Sobic003G384700--Sobic002G042200 Sobic010G161800 Sobic010G161800 Sobic003G384700--Sobic010G161800 Sobic005G080400 Sobic005G080400 Sobic003G384700--Sobic005G080400 Sobic003G351600 Sobic003G351600 Sobic003G384700--Sobic003G351600 Sobic005G203200 Sobic005G203200 Sobic003G384700--Sobic005G203200 Sobic010G185200--Sobic003G183600 Sobic010G185200--Sobic001G342400 Sobic010G185200--Sobic006G086700 Sobic010G185200--Sobic001G234900 Sobic001G504100 Sobic001G504100 Sobic010G185200--Sobic001G504100 Sobic003G327900 Sobic003G327900 Sobic010G185200--Sobic003G327900 Sobic003G076900 Sobic003G076900 Sobic010G185200--Sobic003G076900 Sobic010G185200--Sobic006G122800 Sobic010G185200--Sobic001G379400 Sobic009G181600 Sobic009G181600 Sobic008G164450--Sobic009G181600 Sobic008G164450--Sobic001G506800 Sobic008G164450--Sobic006G092700 Sobic002G146000 Sobic002G146000 Sobic008G164450--Sobic002G146000 Sobic008G164450--Sobic010G113100 Sobic008G164450--Sobic006G135300 Sobic008G164450--Sobic010G028100 Sobic006G003600 Sobic006G003600 Sobic008G164450--Sobic006G003600 Sobic007G037600 Sobic007G037600 Sobic008G164450--Sobic007G037600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.