Gene annotation
Transcriptome id Sobic.004G162000.1
Synonym Sb04g021380, ROC3
Functional annotation peptidyl-prolyl cis-trans isomerase, putative, expressed
UniProt B3GQV9
Pfam PF00160
Panther DB PTHR11071
NCBI CDD KOG0865; Cyclophilin type peptidyl-prolyl cis-trans isomerase
KEGG Orthology K01802; peptidylprolyl isomerase
Gene Ontology GO:0006457; protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT2G16600 : rotamase CYP 3
RAP-DB (Rice) LOC_Os02g02890.1 : peptidyl-prolyl cis-trans isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a045103 , Zm00025a031445 , Zm00025a003805 , Zm00025a020506 , Zm00025a020505 , Zm00025a013433
Brachypodium KQJ91642 , KQJ92978 , KQK24219
Barley HORVU6Hr1G012570.3 , HORVU4Hr1G000910.1 , HORVU4Hr1G000910.2 , HORVU4Hr1G000910.3 , HORVU6Hr1G012570.2 , HORVU6Hr1G012570.1 , HORVU6Hr1G092950.1
Wheat TraesCS4A02G312600 , TraesCS6B02G093100
Populus -


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cDNA sequences
Sobic.004G162000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
2 Sobic.001G095632 - -
3 Sobic.003G305100 expressed protein -
4 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
5 Sobic.005G194900 phosphoserine phosphatase, chloroplast precursor, putative, expressed K01079: serB, phosphoserine phosphatase
6 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
7 Sobic.005G168100 ADP-ribosylation factor, putative, expressed K07950: ADP-ribosylation factor-like protein 5B
8 Sobic.001G087900 expressed protein -
9 Sobic.002G431100 OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed K00434: L-ascorbate peroxidase
10 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
11 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
12 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
13 Sobic.002G180300 isochorismate synthase 1, chloroplast precursor, putative, expressed K15040: voltage-dependent anion channel protein 2
14 Sobic.005G112800 erythronate-4-phosphate dehydrogenase, putative, expressed K01251: E3.3.1.1, adenosylhomocysteinase
15 Sobic.002G308300 expressed protein -
16 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
17 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
18 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
19 Sobic.007G134000 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
20 Sobic.006G276700 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase


Gene co-expression network
sample Sobic004G162000 Sobic004G162000 Sobic002G078300 Sobic002G078300 Sobic004G162000--Sobic002G078300 Sobic001G095632 Sobic001G095632 Sobic004G162000--Sobic001G095632 Sobic003G305100 Sobic003G305100 Sobic004G162000--Sobic003G305100 Sobic002G263100 Sobic002G263100 Sobic004G162000--Sobic002G263100 Sobic005G194900 Sobic005G194900 Sobic004G162000--Sobic005G194900 Sobic002G309700 Sobic002G309700 Sobic004G162000--Sobic002G309700 Sobic005G168100 Sobic005G168100 Sobic004G162000--Sobic005G168100 Sobic001G087900 Sobic001G087900 Sobic004G162000--Sobic001G087900 Sobic002G431100 Sobic002G431100 Sobic004G162000--Sobic002G431100 Sobic001G286200 Sobic001G286200 Sobic002G078300--Sobic001G286200 Sobic010G264300 Sobic010G264300 Sobic002G078300--Sobic010G264300 Sobic004G260200 Sobic004G260200 Sobic002G078300--Sobic004G260200 Sobic002G395000 Sobic002G395000 Sobic002G078300--Sobic002G395000 Sobic002G078300--Sobic002G309700 Sobic007G211500 Sobic007G211500 Sobic002G078300--Sobic007G211500 Sobic002G356400 Sobic002G356400 Sobic002G078300--Sobic002G356400 Sobic001G370700 Sobic001G370700 Sobic002G078300--Sobic001G370700 Sobic002G308300 Sobic002G308300 Sobic002G078300--Sobic002G308300 Sobic009G062000 Sobic009G062000 Sobic001G095632--Sobic009G062000 Sobic001G095632--Sobic001G286200 Sobic004G060500 Sobic004G060500 Sobic001G095632--Sobic004G060500 Sobic001G304400 Sobic001G304400 Sobic001G095632--Sobic001G304400 Sobic001G095632--Sobic010G264300 Sobic001G095632--Sobic002G078300 Sobic008G129400 Sobic008G129400 Sobic001G095632--Sobic008G129400 Sobic001G095632--Sobic003G305100 Sobic001G095632--Sobic002G356400 Sobic003G277000 Sobic003G277000 Sobic003G305100--Sobic003G277000 Sobic006G231500 Sobic006G231500 Sobic003G305100--Sobic006G231500 Sobic007G091000 Sobic007G091000 Sobic003G305100--Sobic007G091000 Sobic003G305100--Sobic009G062000 Sobic002G296200 Sobic002G296200 Sobic003G305100--Sobic002G296200 Sobic003G305100--Sobic001G095632 Sobic002G260200 Sobic002G260200 Sobic003G305100--Sobic002G260200 Sobic009G024500 Sobic009G024500 Sobic003G305100--Sobic009G024500 Sobic001G538600 Sobic001G538600 Sobic003G305100--Sobic001G538600 Sobic007G134900 Sobic007G134900 Sobic002G263100--Sobic007G134900 Sobic001G047800 Sobic001G047800 Sobic002G263100--Sobic001G047800 Sobic002G263100--Sobic002G309700 Sobic001G519000 Sobic001G519000 Sobic002G263100--Sobic001G519000 Sobic002G263100--Sobic004G260200 Sobic003G296800 Sobic003G296800 Sobic002G263100--Sobic003G296800 Sobic003G215700 Sobic003G215700 Sobic002G263100--Sobic003G215700 Sobic002G263100--Sobic001G286200 Sobic001G404800 Sobic001G404800 Sobic002G263100--Sobic001G404800 Sobic004G282700 Sobic004G282700 Sobic005G194900--Sobic004G282700 Sobic005G194900--Sobic002G431100 Sobic009G236100 Sobic009G236100 Sobic005G194900--Sobic009G236100 Sobic007G147800 Sobic007G147800 Sobic005G194900--Sobic007G147800 Sobic003G428300 Sobic003G428300 Sobic005G194900--Sobic003G428300 Sobic010G187500 Sobic010G187500 Sobic005G194900--Sobic010G187500 Sobic004G213200 Sobic004G213200 Sobic005G194900--Sobic004G213200 Sobic005G194900--Sobic004G162000 Sobic007G047300 Sobic007G047300 Sobic005G194900--Sobic007G047300 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G309700--Sobic002G356400 Sobic009G215300 Sobic009G215300 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic001G074700 Sobic001G074700 Sobic002G309700--Sobic001G074700 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700 Sobic009G232900 Sobic009G232900 Sobic005G168100--Sobic009G232900 Sobic001G432000 Sobic001G432000 Sobic005G168100--Sobic001G432000 Sobic006G156000 Sobic006G156000 Sobic005G168100--Sobic006G156000 Sobic003G155400 Sobic003G155400 Sobic005G168100--Sobic003G155400 Sobic003G209000 Sobic003G209000 Sobic005G168100--Sobic003G209000 Sobic005G168100--Sobic002G296200 Sobic002G418400 Sobic002G418400 Sobic005G168100--Sobic002G418400 Sobic005G168100--Sobic003G215700 Sobic003G150000 Sobic003G150000 Sobic005G168100--Sobic003G150000 Sobic004G351500 Sobic004G351500 Sobic001G087900--Sobic004G351500 Sobic001G428200 Sobic001G428200 Sobic001G087900--Sobic001G428200 Sobic001G353600 Sobic001G353600 Sobic001G087900--Sobic001G353600 Sobic009G131100 Sobic009G131100 Sobic001G087900--Sobic009G131100 Sobic009G198500 Sobic009G198500 Sobic001G087900--Sobic009G198500 Sobic004G272300 Sobic004G272300 Sobic001G087900--Sobic004G272300 Sobic004G026400 Sobic004G026400 Sobic001G087900--Sobic004G026400 Sobic001G087900--Sobic001G095632 Sobic001G034700 Sobic001G034700 Sobic001G087900--Sobic001G034700 Sobic002G431100--Sobic005G194900 Sobic006G276700 Sobic006G276700 Sobic002G431100--Sobic006G276700 Sobic002G431100--Sobic004G162000 Sobic001G031900 Sobic001G031900 Sobic002G431100--Sobic001G031900 Sobic002G431100--Sobic004G282700 Sobic003G336000 Sobic003G336000 Sobic002G431100--Sobic003G336000 Sobic010G185200 Sobic010G185200 Sobic002G431100--Sobic010G185200 Sobic006G058900 Sobic006G058900 Sobic002G431100--Sobic006G058900 Sobic004G297700 Sobic004G297700 Sobic002G431100--Sobic004G297700
Octagon: transcription factors


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