Gene annotation
Transcriptome id Sobic.003G391900.1
Synonym Sb03g042940
Functional annotation Divergent PAP2 family domain containing protein, expressed
UniProt C5XFF6
Pfam PF02681
Panther DB PTHR31446 PTHR31446:SF9
NCBI CDD -
KEGG Orthology K09775; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G24350 : Acid phosphatase/vanadium-dependent haloperoxidase-related protein
RAP-DB (Rice) LOC_Os01g67560.1 : Divergent PAP2 family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039438 , Zm00025a026397
Brachypodium KQK11063
Barley HORVU3Hr1G088990.3 , HORVU3Hr1G088990.2 , HORVU3Hr1G088990.1 , HORVU3Hr1G088990.4
Wheat TraesCS3B02G426000 , TraesCS3D02G387800 , TraesCS3A02G394000
Populus -


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cDNA sequences
Sobic.003G391900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G391200 ABC transporter, ATP-binding protein, putative, expressed K12608: CCR4-NOT complex subunit CAF16
2 Sobic.003G308400 expressed protein -
3 Sobic.004G334000 similar to Putative uncharacterized protein(PubMedID : 29862293)@monogalactosyldiacylglycerol synthase, putative, expressed K03715: 1,2-diacylglycerol 3-beta-galactosyltransferase
4 Sobic.002G194000 monoglyceride lipase, putative, expressed -
5 Sobic.004G297700 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
6 Sobic.002G355300 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
7 Sobic.010G225801 - -
8 Sobic.010G007300 hydrolase activity(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase activity(PubMedID : 24655390)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
9 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit
10 Sobic.003G116600 syntaxin, putative, expressed K08488: syntaxin 7
11 Sobic.007G190700 Glycerophosphodiester phosphodiesterase (At)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
12 Sobic.002G431100 OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed K00434: L-ascorbate peroxidase
13 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
14 Sobic.004G293500 CPuORF22 - conserved peptide uORF-containing transcript, expressed K01087: trehalose 6-phosphate phosphatase
15 Sobic.005G019100 TRAF-type zinc finger family protein, expressed -
16 Sobic.007G023400 succinate dehydrogenase iron-sulfur subunit 2,mitochondrial precursor, putative, expressed K00235: SDHB, succinate dehydrogenase (ubiquinone) iron-sulfur subunit
17 Sobic.002G194100 annexin, putative, expressed K17095: annexin A7/11
18 Sobic.007G137600 NADP-dependent malate dehydrogenase(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
19 Sobic.007G019100 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
20 Sobic.006G276700 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase


Gene co-expression network
sample Sobic003G391900 Sobic003G391900 Sobic001G391200 Sobic001G391200 Sobic003G391900--Sobic001G391200 Sobic003G308400 Sobic003G308400 Sobic003G391900--Sobic003G308400 Sobic004G334000 Sobic004G334000 Sobic003G391900--Sobic004G334000 Sobic002G194000 Sobic002G194000 Sobic003G391900--Sobic002G194000 Sobic004G297700 Sobic004G297700 Sobic003G391900--Sobic004G297700 Sobic002G355300 Sobic002G355300 Sobic003G391900--Sobic002G355300 Sobic010G225801 Sobic010G225801 Sobic003G391900--Sobic010G225801 Sobic010G007300 Sobic010G007300 Sobic003G391900--Sobic010G007300 Sobic007G171500 Sobic007G171500 Sobic003G391900--Sobic007G171500 Sobic001G391200--Sobic007G171500 Sobic001G391200--Sobic004G297700 Sobic003G380300 Sobic003G380300 Sobic001G391200--Sobic003G380300 Sobic004G256700 Sobic004G256700 Sobic001G391200--Sobic004G256700 Sobic010G032600 Sobic010G032600 Sobic001G391200--Sobic010G032600 Sobic001G387200 Sobic001G387200 Sobic001G391200--Sobic001G387200 Sobic001G518500 Sobic001G518500 Sobic001G391200--Sobic001G518500 Sobic003G129900 Sobic003G129900 Sobic001G391200--Sobic003G129900 Sobic001G391200--Sobic003G308400 Sobic003G308400--Sobic010G032600 Sobic008G129000 Sobic008G129000 Sobic003G308400--Sobic008G129000 Sobic003G141700 Sobic003G141700 Sobic003G308400--Sobic003G141700 Sobic001G308700 Sobic001G308700 Sobic003G308400--Sobic001G308700 Sobic001G122500 Sobic001G122500 Sobic003G308400--Sobic001G122500 Sobic006G230400 Sobic006G230400 Sobic003G308400--Sobic006G230400 Sobic003G308400--Sobic001G391200 Sobic007G195701 Sobic007G195701 Sobic003G308400--Sobic007G195701 Sobic001G038000 Sobic001G038000 Sobic003G308400--Sobic001G038000 Sobic002G428200 Sobic002G428200 Sobic004G334000--Sobic002G428200 Sobic001G040800 Sobic001G040800 Sobic004G334000--Sobic001G040800 Sobic004G344800 Sobic004G344800 Sobic004G334000--Sobic004G344800 Sobic004G334000--Sobic003G391900 Sobic006G276700 Sobic006G276700 Sobic004G334000--Sobic006G276700 Sobic003G116600 Sobic003G116600 Sobic004G334000--Sobic003G116600 Sobic002G396700 Sobic002G396700 Sobic004G334000--Sobic002G396700 Sobic009G195900 Sobic009G195900 Sobic004G334000--Sobic009G195900 Sobic002G194100 Sobic002G194100 Sobic004G334000--Sobic002G194100 Sobic002G194000--Sobic004G256700 Sobic002G194000--Sobic003G116600 Sobic010G243400 Sobic010G243400 Sobic002G194000--Sobic010G243400 Sobic005G019100 Sobic005G019100 Sobic002G194000--Sobic005G019100 Sobic008G165000 Sobic008G165000 Sobic002G194000--Sobic008G165000 Sobic003G196600 Sobic003G196600 Sobic002G194000--Sobic003G196600 Sobic001G421400 Sobic001G421400 Sobic002G194000--Sobic001G421400 Sobic007G056100 Sobic007G056100 Sobic002G194000--Sobic007G056100 Sobic003G374000 Sobic003G374000 Sobic002G194000--Sobic003G374000 Sobic004G297700--Sobic007G171500 Sobic004G297700--Sobic010G032600 Sobic004G297700--Sobic006G276700 Sobic002G186300 Sobic002G186300 Sobic004G297700--Sobic002G186300 Sobic004G244000 Sobic004G244000 Sobic004G297700--Sobic004G244000 Sobic007G023400 Sobic007G023400 Sobic004G297700--Sobic007G023400 Sobic001G457000 Sobic001G457000 Sobic004G297700--Sobic001G457000 Sobic004G202100 Sobic004G202100 Sobic004G297700--Sobic004G202100 Sobic003G034900 Sobic003G034900 Sobic004G297700--Sobic003G034900 Sobic003G386000 Sobic003G386000 Sobic002G355300--Sobic003G386000 Sobic002G355300--Sobic001G040800 Sobic004G055200 Sobic004G055200 Sobic002G355300--Sobic004G055200 Sobic006G232200 Sobic006G232200 Sobic002G355300--Sobic006G232200 Sobic003G155400 Sobic003G155400 Sobic002G355300--Sobic003G155400 Sobic002G222900 Sobic002G222900 Sobic002G355300--Sobic002G222900 Sobic001G459200 Sobic001G459200 Sobic002G355300--Sobic001G459200 Sobic007G019100 Sobic007G019100 Sobic002G355300--Sobic007G019100 Sobic004G170400 Sobic004G170400 Sobic002G355300--Sobic004G170400 Sobic010G225801--Sobic010G007300 Sobic010G225801--Sobic003G391900 Sobic010G225801--Sobic001G391200 Sobic003G370500 Sobic003G370500 Sobic010G225801--Sobic003G370500 Sobic004G285700 Sobic004G285700 Sobic010G225801--Sobic004G285700 Sobic010G225801--Sobic002G194000 Sobic006G254100 Sobic006G254100 Sobic010G225801--Sobic006G254100 Sobic001G460600 Sobic001G460600 Sobic010G225801--Sobic001G460600 Sobic010G225801--Sobic005G019100 Sobic010G007300--Sobic004G285700 Sobic002G307800 Sobic002G307800 Sobic010G007300--Sobic002G307800 Sobic002G310900 Sobic002G310900 Sobic010G007300--Sobic002G310900 Sobic003G403300 Sobic003G403300 Sobic010G007300--Sobic003G403300 Sobic006G250800 Sobic006G250800 Sobic010G007300--Sobic006G250800 Sobic010G007300--Sobic010G225801 Sobic004G151800 Sobic004G151800 Sobic010G007300--Sobic004G151800 Sobic003G150500 Sobic003G150500 Sobic010G007300--Sobic003G150500 Sobic002G252300 Sobic002G252300 Sobic010G007300--Sobic002G252300 Sobic007G171500--Sobic004G297700 Sobic007G171500--Sobic003G034900 Sobic001G458800 Sobic001G458800 Sobic007G171500--Sobic001G458800 Sobic009G224400 Sobic009G224400 Sobic007G171500--Sobic009G224400 Sobic007G171500--Sobic010G032600 Sobic002G395000 Sobic002G395000 Sobic007G171500--Sobic002G395000 Sobic006G058900 Sobic006G058900 Sobic007G171500--Sobic006G058900 Sobic009G191400 Sobic009G191400 Sobic007G171500--Sobic009G191400 Sobic007G171500--Sobic001G457000
Octagon: transcription factors


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