Gene annotation
Transcriptome id Sobic.004G293500.4,Sobic.004G293500.6,Sobic.004G293500.3,Sobic.004G293500.1,Sobic.004G293500.5,Sobic.004G293500.2
Synonym ATTPPA, Sb04g032740
Functional annotation CPuORF22 - conserved peptide uORF-containing transcript, expressed
UniProt A0A194YS65
Pfam PF02358
Panther DB PTHR10788 PTHR10788:SF41
NCBI CDD -
KEGG Orthology K01087; trehalose 6-phosphate phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G51460 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os02g44230.1,LOC_Os02g44230.3,LOC_Os02g44230.2 : CPuORF22 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a021392
Brachypodium -
Barley HORVU6Hr1G063370.1 , HORVU2Hr1G097300.3 , HORVU2Hr1G097300.2 , HORVU2Hr1G097300.1 , HORVU2Hr1G097300.7 , HORVU2Hr1G097300.6 , HORVU2Hr1G097300.5 , HORVU2Hr1G097300.4 , HORVU2Hr1G097300.9 , HORVU2Hr1G097300.8 , HORVU0Hr1G023540.4 , HORVU0Hr1G023540.5 , HORVU0Hr1G023540.1 , HORVU0Hr1G023540.2 , HORVU0Hr1G023540.3
Wheat TraesCS6A02G248400 , TraesCS6D02G230500 , TraesCS6B02G276300 , TraesCS2A02G412100 , TraesCS2D02G409300 , TraesCS2B02G430700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G268200 expressed protein -
2 Sobic.001G158500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LSD1 zinc finger domain containing protein, expressed -
3 Sobic.001G203200 E2F-related protein, putative, expressed -
4 Sobic.003G023000 CID11, putative, expressed -
5 Sobic.003G367451 - K08516: synaptobrevin homolog YKT6
6 Sobic.006G091100 expressed protein -
7 Sobic.006G182100 ORM1, putative, expressed -
8 Sobic.009G135100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipase, putative, expressed -
9 Sobic.004G350300 No apical meristem protein, putative, expressed -
10 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
11 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
12 Sobic.004G334800 vacuolar protein sorting 55 family protein, putative, expressed -
13 Sobic.002G083266 - K00326: cytochrome-b5 reductase
14 Sobic.001G330700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
15 Sobic.003G308400 expressed protein -
16 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
17 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
18 Sobic.010G204300 expressed protein -
19 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
20 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6


Gene co-expression network
sample Sobic004G293500 Sobic004G293500 Sobic004G268200 Sobic004G268200 Sobic004G293500--Sobic004G268200 Sobic001G158500 Sobic001G158500 Sobic004G293500--Sobic001G158500 Sobic001G203200 Sobic001G203200 Sobic004G293500--Sobic001G203200 Sobic003G023000 Sobic003G023000 Sobic004G293500--Sobic003G023000 Sobic003G367451 Sobic003G367451 Sobic004G293500--Sobic003G367451 Sobic006G091100 Sobic006G091100 Sobic004G293500--Sobic006G091100 Sobic006G182100 Sobic006G182100 Sobic004G293500--Sobic006G182100 Sobic009G135100 Sobic009G135100 Sobic004G293500--Sobic009G135100 Sobic004G350300 Sobic004G350300 Sobic004G293500--Sobic004G350300 Sobic007G171000 Sobic007G171000 Sobic004G268200--Sobic007G171000 Sobic001G308700 Sobic001G308700 Sobic004G268200--Sobic001G308700 Sobic001G513300 Sobic001G513300 Sobic004G268200--Sobic001G513300 Sobic008G129000 Sobic008G129000 Sobic004G268200--Sobic008G129000 Sobic002G202300 Sobic002G202300 Sobic004G268200--Sobic002G202300 Sobic002G386800 Sobic002G386800 Sobic004G268200--Sobic002G386800 Sobic010G246000 Sobic010G246000 Sobic004G268200--Sobic010G246000 Sobic005G028700 Sobic005G028700 Sobic004G268200--Sobic005G028700 Sobic004G339300 Sobic004G339300 Sobic004G268200--Sobic004G339300 Sobic004G102400 Sobic004G102400 Sobic001G158500--Sobic004G102400 Sobic001G057800 Sobic001G057800 Sobic001G158500--Sobic001G057800 Sobic002G375300 Sobic002G375300 Sobic001G158500--Sobic002G375300 Sobic001G158500--Sobic003G367451 Sobic002G083266 Sobic002G083266 Sobic001G158500--Sobic002G083266 Sobic001G433400 Sobic001G433400 Sobic001G158500--Sobic001G433400 Sobic002G264400 Sobic002G264400 Sobic001G158500--Sobic002G264400 Sobic002G385900 Sobic002G385900 Sobic001G158500--Sobic002G385900 Sobic001G085900 Sobic001G085900 Sobic001G158500--Sobic001G085900 Sobic009G208800 Sobic009G208800 Sobic001G203200--Sobic009G208800 Sobic001G125800 Sobic001G125800 Sobic001G203200--Sobic001G125800 Sobic004G036600 Sobic004G036600 Sobic001G203200--Sobic004G036600 Sobic002G294700 Sobic002G294700 Sobic001G203200--Sobic002G294700 Sobic009G220200 Sobic009G220200 Sobic001G203200--Sobic009G220200 Sobic003G153300 Sobic003G153300 Sobic001G203200--Sobic003G153300 Sobic010G052800 Sobic010G052800 Sobic001G203200--Sobic010G052800 Sobic002G362900 Sobic002G362900 Sobic001G203200--Sobic002G362900 Sobic002G374100 Sobic002G374100 Sobic001G203200--Sobic002G374100 Sobic003G023000--Sobic003G367451 Sobic003G104700 Sobic003G104700 Sobic003G023000--Sobic003G104700 Sobic003G023000--Sobic002G083266 Sobic003G023000--Sobic006G182100 Sobic001G224400 Sobic001G224400 Sobic003G023000--Sobic001G224400 Sobic002G214900 Sobic002G214900 Sobic003G023000--Sobic002G214900 Sobic001G403700 Sobic001G403700 Sobic003G023000--Sobic001G403700 Sobic010G026700 Sobic010G026700 Sobic003G023000--Sobic010G026700 Sobic009G001400 Sobic009G001400 Sobic003G023000--Sobic009G001400 Sobic004G327300 Sobic004G327300 Sobic003G367451--Sobic004G327300 Sobic001G236300 Sobic001G236300 Sobic003G367451--Sobic001G236300 Sobic007G114200 Sobic007G114200 Sobic003G367451--Sobic007G114200 Sobic003G367451--Sobic001G433400 Sobic004G272800 Sobic004G272800 Sobic003G367451--Sobic004G272800 Sobic003G367451--Sobic002G083266 Sobic004G130900 Sobic004G130900 Sobic003G367451--Sobic004G130900 Sobic003G253000 Sobic003G253000 Sobic003G367451--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic003G367451--Sobic003G220600 Sobic006G091100--Sobic001G158500 Sobic003G348400 Sobic003G348400 Sobic006G091100--Sobic003G348400 Sobic006G091100--Sobic001G085900 Sobic003G338400 Sobic003G338400 Sobic006G091100--Sobic003G338400 Sobic006G091100--Sobic004G102400 Sobic001G313500 Sobic001G313500 Sobic006G091100--Sobic001G313500 Sobic006G140000 Sobic006G140000 Sobic006G091100--Sobic006G140000 Sobic006G192700 Sobic006G192700 Sobic006G091100--Sobic006G192700 Sobic010G016400 Sobic010G016400 Sobic006G091100--Sobic010G016400 Sobic004G284500 Sobic004G284500 Sobic006G182100--Sobic004G284500 Sobic009G033700 Sobic009G033700 Sobic006G182100--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic006G182100--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic006G182100--Sobic010G018400 Sobic004G196300 Sobic004G196300 Sobic006G182100--Sobic004G196300 Sobic001G281400 Sobic001G281400 Sobic006G182100--Sobic001G281400 Sobic008G185400 Sobic008G185400 Sobic006G182100--Sobic008G185400 Sobic003G368500 Sobic003G368500 Sobic006G182100--Sobic003G368500 Sobic001G445800 Sobic001G445800 Sobic006G182100--Sobic001G445800 Sobic001G103200 Sobic001G103200 Sobic009G135100--Sobic001G103200 Sobic007G125900 Sobic007G125900 Sobic009G135100--Sobic007G125900 Sobic004G236550 Sobic004G236550 Sobic009G135100--Sobic004G236550 Sobic005G035300 Sobic005G035300 Sobic009G135100--Sobic005G035300 Sobic009G135100--Sobic010G016400 Sobic001G074200 Sobic001G074200 Sobic009G135100--Sobic001G074200 Sobic009G079300 Sobic009G079300 Sobic009G135100--Sobic009G079300 Sobic009G200300 Sobic009G200300 Sobic009G135100--Sobic009G200300 Sobic009G135100--Sobic001G085900 Sobic003G002400 Sobic003G002400 Sobic004G350300--Sobic003G002400 Sobic001G434900 Sobic001G434900 Sobic004G350300--Sobic001G434900 Sobic003G248600 Sobic003G248600 Sobic004G350300--Sobic003G248600 Sobic004G321900 Sobic004G321900 Sobic004G350300--Sobic004G321900 Sobic004G183400 Sobic004G183400 Sobic004G350300--Sobic004G183400 Sobic001G122500 Sobic001G122500 Sobic004G350300--Sobic001G122500 Sobic002G045300 Sobic002G045300 Sobic004G350300--Sobic002G045300 Sobic004G350300--Sobic001G433400 Sobic004G274400 Sobic004G274400 Sobic004G350300--Sobic004G274400
Octagon: transcription factors


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