Gene annotation
Transcriptome id Sobic.006G091100.1,Sobic.006G091100.2
Synonym Sb06g017620
Functional annotation expressed protein
UniProt C5Y953
Pfam -
Panther DB PTHR34116 PTHR34116:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G57680 : -
RAP-DB (Rice) LOC_Os04g36630.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ89713 , KQK08459
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G091100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G158500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LSD1 zinc finger domain containing protein, expressed -
2 Sobic.003G348400 ankyrin repeat-containing protein, putative, expressed -
3 Sobic.001G085900 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
4 Sobic.003G338400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase NAK, putative, expressed -
5 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
6 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
7 Sobic.006G140000 receptor-like protein kinase precursor, putative, expressed -
8 Sobic.006G192700 expressed protein -
9 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
10 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
11 Sobic.004G074500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
12 Sobic.002G296300 expressed protein -
13 Sobic.005G150800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@yippee zinc-binding protein, putative, expressed -
14 Sobic.004G054300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
15 Sobic.001G026900 cytidine deaminase, putative, expressed -
16 Sobic.009G239500 CTP synthase, putative, expressed K01937: pyrG, CTP synthase
17 Sobic.001G048700 TBC domain containing protein, expressed -
18 Sobic.001G512400 expressed protein -
19 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
20 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -


Gene co-expression network
sample Sobic006G091100 Sobic006G091100 Sobic001G158500 Sobic001G158500 Sobic006G091100--Sobic001G158500 Sobic003G348400 Sobic003G348400 Sobic006G091100--Sobic003G348400 Sobic001G085900 Sobic001G085900 Sobic006G091100--Sobic001G085900 Sobic003G338400 Sobic003G338400 Sobic006G091100--Sobic003G338400 Sobic004G102400 Sobic004G102400 Sobic006G091100--Sobic004G102400 Sobic001G313500 Sobic001G313500 Sobic006G091100--Sobic001G313500 Sobic006G140000 Sobic006G140000 Sobic006G091100--Sobic006G140000 Sobic006G192700 Sobic006G192700 Sobic006G091100--Sobic006G192700 Sobic010G016400 Sobic010G016400 Sobic006G091100--Sobic010G016400 Sobic001G158500--Sobic004G102400 Sobic001G057800 Sobic001G057800 Sobic001G158500--Sobic001G057800 Sobic002G375300 Sobic002G375300 Sobic001G158500--Sobic002G375300 Sobic003G367451 Sobic003G367451 Sobic001G158500--Sobic003G367451 Sobic002G083266 Sobic002G083266 Sobic001G158500--Sobic002G083266 Sobic001G433400 Sobic001G433400 Sobic001G158500--Sobic001G433400 Sobic002G264400 Sobic002G264400 Sobic001G158500--Sobic002G264400 Sobic002G385900 Sobic002G385900 Sobic001G158500--Sobic002G385900 Sobic001G158500--Sobic001G085900 Sobic007G125900 Sobic007G125900 Sobic003G348400--Sobic007G125900 Sobic005G117400 Sobic005G117400 Sobic003G348400--Sobic005G117400 Sobic001G151800 Sobic001G151800 Sobic003G348400--Sobic001G151800 Sobic003G348400--Sobic003G338400 Sobic003G348400--Sobic004G102400 Sobic003G348400--Sobic006G140000 Sobic003G348400--Sobic006G091100 Sobic005G212700 Sobic005G212700 Sobic003G348400--Sobic005G212700 Sobic001G003000 Sobic001G003000 Sobic003G348400--Sobic001G003000 Sobic004G039300 Sobic004G039300 Sobic001G085900--Sobic004G039300 Sobic001G085900--Sobic001G313500 Sobic001G085900--Sobic001G158500 Sobic001G085900--Sobic002G083266 Sobic001G085900--Sobic002G385900 Sobic010G129600 Sobic010G129600 Sobic001G085900--Sobic010G129600 Sobic001G298300 Sobic001G298300 Sobic001G085900--Sobic001G298300 Sobic007G006700 Sobic007G006700 Sobic001G085900--Sobic007G006700 Sobic003G061900 Sobic003G061900 Sobic001G085900--Sobic003G061900 Sobic003G338400--Sobic004G102400 Sobic003G338400--Sobic003G348400 Sobic004G341200 Sobic004G341200 Sobic003G338400--Sobic004G341200 Sobic009G167700 Sobic009G167700 Sobic003G338400--Sobic009G167700 Sobic003G338400--Sobic010G016400 Sobic003G338400--Sobic001G003000 Sobic003G338400--Sobic001G158500 Sobic003G338400--Sobic006G140000 Sobic001G089800 Sobic001G089800 Sobic003G338400--Sobic001G089800 Sobic004G102400--Sobic003G338400 Sobic004G102400--Sobic001G158500 Sobic004G102400--Sobic001G003000 Sobic004G102400--Sobic009G167700 Sobic005G150800 Sobic005G150800 Sobic004G102400--Sobic005G150800 Sobic006G271200 Sobic006G271200 Sobic004G102400--Sobic006G271200 Sobic004G102400--Sobic001G089800 Sobic004G102400--Sobic001G057800 Sobic004G042300 Sobic004G042300 Sobic004G102400--Sobic004G042300 Sobic001G421400 Sobic001G421400 Sobic001G313500--Sobic001G421400 Sobic001G512400 Sobic001G512400 Sobic001G313500--Sobic001G512400 Sobic001G313500--Sobic001G085900 Sobic001G313500--Sobic002G385900 Sobic001G161900 Sobic001G161900 Sobic001G313500--Sobic001G161900 Sobic001G313500--Sobic010G129600 Sobic009G135600 Sobic009G135600 Sobic001G313500--Sobic009G135600 Sobic010G261600 Sobic010G261600 Sobic001G313500--Sobic010G261600 Sobic001G313500--Sobic004G039300 Sobic001G488500 Sobic001G488500 Sobic006G140000--Sobic001G488500 Sobic006G140000--Sobic003G348400 Sobic004G185900 Sobic004G185900 Sobic006G140000--Sobic004G185900 Sobic006G140000--Sobic003G338400 Sobic006G140000--Sobic001G151800 Sobic005G215900 Sobic005G215900 Sobic006G140000--Sobic005G215900 Sobic003G085300 Sobic003G085300 Sobic006G140000--Sobic003G085300 Sobic006G140000--Sobic010G016400 Sobic006G140000--Sobic004G102400 Sobic006G192700--Sobic001G057800 Sobic010G064600 Sobic010G064600 Sobic006G192700--Sobic010G064600 Sobic008G093000 Sobic008G093000 Sobic006G192700--Sobic008G093000 Sobic004G006200 Sobic004G006200 Sobic006G192700--Sobic004G006200 Sobic006G192700--Sobic001G003000 Sobic009G207000 Sobic009G207000 Sobic006G192700--Sobic009G207000 Sobic003G009100 Sobic003G009100 Sobic006G192700--Sobic003G009100 Sobic005G139400 Sobic005G139400 Sobic006G192700--Sobic005G139400 Sobic002G244100 Sobic002G244100 Sobic006G192700--Sobic002G244100 Sobic010G016400--Sobic005G139400 Sobic010G016400--Sobic009G167700 Sobic004G347300 Sobic004G347300 Sobic010G016400--Sobic004G347300 Sobic006G119200 Sobic006G119200 Sobic010G016400--Sobic006G119200 Sobic007G148800 Sobic007G148800 Sobic010G016400--Sobic007G148800 Sobic006G217700 Sobic006G217700 Sobic010G016400--Sobic006G217700 Sobic001G010400 Sobic001G010400 Sobic010G016400--Sobic001G010400 Sobic010G016400--Sobic004G102400 Sobic009G172500 Sobic009G172500 Sobic010G016400--Sobic009G172500
Octagon: transcription factors


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