Gene annotation
Transcriptome id Sobic.001G391200.1
Synonym ATNAP9, NAP9, Sb01g037080
Functional annotation ABC transporter, ATP-binding protein, putative, expressed
UniProt C5X1V1
Pfam PF00005
Panther DB PTHR12847 PTHR12847:SF5
NCBI CDD KOG2355; Predicted ABC-type transport, ATPase component/CCR4 associated factor
KEGG Orthology K12608; CCR4-NOT complex subunit CAF16
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT5G02270 : non-intrinsic ABC protein 9
RAP-DB (Rice) LOC_Os03g20170.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a052515
Brachypodium KQK21943 , KQK21931
Barley HORVU4Hr1G052430.1 , HORVU4Hr1G052430.2 , HORVU4Hr1G052430.3
Wheat TraesCS4B02G179200 , TraesCS4A02G125500 , TraesCS4D02G180700 , TraesCS4D02G180700 , TraesCS4B02G179200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit
2 Sobic.004G297700 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
3 Sobic.003G380300 cytochrome c, putative, expressed K08738: cytochrome c
4 Sobic.004G256700 ZAC, putative, expressed K12486: stromal membrane-associated protein
5 Sobic.010G032600 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
6 Sobic.001G387200 expressed protein -
7 Sobic.001G518500 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
8 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
9 Sobic.003G308400 expressed protein -
10 Sobic.001G457000 ATP synthase gamma chain, putative, expressed K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma
11 Sobic.005G019100 TRAF-type zinc finger family protein, expressed -
12 Sobic.002G194000 monoglyceride lipase, putative, expressed -
13 Sobic.004G339300 ABC transporter, ATP-binding protein, putative, expressed K12608: CCR4-NOT complex subunit CAF16
14 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
15 Sobic.004G352500 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
16 Sobic.007G023400 succinate dehydrogenase iron-sulfur subunit 2,mitochondrial precursor, putative, expressed K00235: SDHB, succinate dehydrogenase (ubiquinone) iron-sulfur subunit
17 Sobic.002G186500 UPF0041 domain containing protein, putative, expressed -
18 Sobic.003G116600 syntaxin, putative, expressed K08488: syntaxin 7
19 Sobic.003G273900 mitochondrial carrier protein, putative, expressed -
20 Sobic.009G209900 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g


Gene co-expression network
sample Sobic001G391200 Sobic001G391200 Sobic007G171500 Sobic007G171500 Sobic001G391200--Sobic007G171500 Sobic004G297700 Sobic004G297700 Sobic001G391200--Sobic004G297700 Sobic003G380300 Sobic003G380300 Sobic001G391200--Sobic003G380300 Sobic004G256700 Sobic004G256700 Sobic001G391200--Sobic004G256700 Sobic010G032600 Sobic010G032600 Sobic001G391200--Sobic010G032600 Sobic001G387200 Sobic001G387200 Sobic001G391200--Sobic001G387200 Sobic001G518500 Sobic001G518500 Sobic001G391200--Sobic001G518500 Sobic003G129900 Sobic003G129900 Sobic001G391200--Sobic003G129900 Sobic003G308400 Sobic003G308400 Sobic001G391200--Sobic003G308400 Sobic007G171500--Sobic004G297700 Sobic003G034900 Sobic003G034900 Sobic007G171500--Sobic003G034900 Sobic001G458800 Sobic001G458800 Sobic007G171500--Sobic001G458800 Sobic009G224400 Sobic009G224400 Sobic007G171500--Sobic009G224400 Sobic007G171500--Sobic010G032600 Sobic002G395000 Sobic002G395000 Sobic007G171500--Sobic002G395000 Sobic006G058900 Sobic006G058900 Sobic007G171500--Sobic006G058900 Sobic009G191400 Sobic009G191400 Sobic007G171500--Sobic009G191400 Sobic001G457000 Sobic001G457000 Sobic007G171500--Sobic001G457000 Sobic004G297700--Sobic007G171500 Sobic004G297700--Sobic010G032600 Sobic006G276700 Sobic006G276700 Sobic004G297700--Sobic006G276700 Sobic002G186300 Sobic002G186300 Sobic004G297700--Sobic002G186300 Sobic004G244000 Sobic004G244000 Sobic004G297700--Sobic004G244000 Sobic007G023400 Sobic007G023400 Sobic004G297700--Sobic007G023400 Sobic004G297700--Sobic001G457000 Sobic004G202100 Sobic004G202100 Sobic004G297700--Sobic004G202100 Sobic004G297700--Sobic003G034900 Sobic006G120900 Sobic006G120900 Sobic003G380300--Sobic006G120900 Sobic001G408400 Sobic001G408400 Sobic003G380300--Sobic001G408400 Sobic003G380300--Sobic001G387200 Sobic010G105000 Sobic010G105000 Sobic003G380300--Sobic010G105000 Sobic004G173700 Sobic004G173700 Sobic003G380300--Sobic004G173700 Sobic003G234500 Sobic003G234500 Sobic003G380300--Sobic003G234500 Sobic003G137600 Sobic003G137600 Sobic003G380300--Sobic003G137600 Sobic003G380300--Sobic003G129900 Sobic002G259700 Sobic002G259700 Sobic003G380300--Sobic002G259700 Sobic004G256700--Sobic003G129900 Sobic005G019100 Sobic005G019100 Sobic004G256700--Sobic005G019100 Sobic004G256700--Sobic001G387200 Sobic004G256700--Sobic006G120900 Sobic004G093600 Sobic004G093600 Sobic004G256700--Sobic004G093600 Sobic003G196600 Sobic003G196600 Sobic004G256700--Sobic003G196600 Sobic003G274200 Sobic003G274200 Sobic004G256700--Sobic003G274200 Sobic004G256700--Sobic004G173700 Sobic004G256700--Sobic001G518500 Sobic010G032600--Sobic007G023400 Sobic010G032600--Sobic002G395000 Sobic010G032600--Sobic007G171500 Sobic010G032600--Sobic004G297700 Sobic010G032600--Sobic001G457000 Sobic002G262200 Sobic002G262200 Sobic010G032600--Sobic002G262200 Sobic001G073600 Sobic001G073600 Sobic010G032600--Sobic001G073600 Sobic010G032600--Sobic009G191400 Sobic010G032600--Sobic009G224400 Sobic001G387200--Sobic003G129900 Sobic001G387200--Sobic004G093600 Sobic001G387200--Sobic006G120900 Sobic001G387200--Sobic004G173700 Sobic008G018300 Sobic008G018300 Sobic001G387200--Sobic008G018300 Sobic001G387200--Sobic004G256700 Sobic002G255400 Sobic002G255400 Sobic001G387200--Sobic002G255400 Sobic002G420600 Sobic002G420600 Sobic001G387200--Sobic002G420600 Sobic001G387200--Sobic005G019100 Sobic009G112900 Sobic009G112900 Sobic001G518500--Sobic009G112900 Sobic001G518500--Sobic003G129900 Sobic001G518500--Sobic009G224400 Sobic001G518500--Sobic005G019100 Sobic001G518500--Sobic001G387200 Sobic004G039400 Sobic004G039400 Sobic001G518500--Sobic004G039400 Sobic001G518500--Sobic002G262200 Sobic002G079700 Sobic002G079700 Sobic001G518500--Sobic002G079700 Sobic001G518500--Sobic007G171500 Sobic003G129900--Sobic001G387200 Sobic003G129900--Sobic004G093600 Sobic003G129900--Sobic006G120900 Sobic003G129900--Sobic005G019100 Sobic003G129900--Sobic004G173700 Sobic003G129900--Sobic004G256700 Sobic003G129900--Sobic002G420600 Sobic003G129900--Sobic003G034900 Sobic003G129900--Sobic001G518500 Sobic003G308400--Sobic010G032600 Sobic008G129000 Sobic008G129000 Sobic003G308400--Sobic008G129000 Sobic003G141700 Sobic003G141700 Sobic003G308400--Sobic003G141700 Sobic001G308700 Sobic001G308700 Sobic003G308400--Sobic001G308700 Sobic001G122500 Sobic001G122500 Sobic003G308400--Sobic001G122500 Sobic006G230400 Sobic006G230400 Sobic003G308400--Sobic006G230400 Sobic003G308400--Sobic001G391200 Sobic007G195701 Sobic007G195701 Sobic003G308400--Sobic007G195701 Sobic001G038000 Sobic001G038000 Sobic003G308400--Sobic001G038000
Octagon: transcription factors


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