Gene annotation
Transcriptome id Sobic.003G336000.1,Sobic.003G336000.2
Synonym Sb03g038020
Functional annotation 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed
UniProt A0A1B6Q6S1
Pfam PF06415 PF01676
Panther DB PTHR31637 PTHR31637:SF3
NCBI CDD -
KEGG Orthology K15633; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Gene Ontology GO:0006007; glucose catabolic process GO:0005737cytoplasm GO:0004619phosphoglycerate mutase activity GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G08590 : Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
RAP-DB (Rice) LOC_Os01g60190.2,LOC_Os01g60190.1 : 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed
MaizeGDB (Corn) Zm00025a007582 , Zm00025a027082 , Zm00025a039781 , Zm00025a023362
Brachypodium KQK10319
Barley HORVU3Hr1G080530.7 , HORVU3Hr1G080530.8 , HORVU3Hr1G080530.5 , HORVU3Hr1G080530.4 , HORVU3Hr1G080530.6 , HORVU3Hr1G080530.1 , HORVU3Hr1G080530.3 , HORVU3Hr1G080530.2
Wheat TraesCS3D02G334500 , TraesCS3B02G373000 , TraesCS3A02G341000
Populus PNT31023


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cDNA sequences
Sobic.003G336000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G027000 enolase, putative, expressed K01689: ENO, enolase
2 Sobic.002G355300 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
3 Sobic.001G503500 ubiquitin-conjugating enzyme, putative, expressed K10576: UBE2H, ubiquitin-conjugating enzyme E2 H
4 Sobic.009G217900 expressed protein K06875: PDCD5, programmed cell death protein 5
5 Sobic.004G058200 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
6 Sobic.010G026925 - K01689: ENO, enolase
7 Sobic.007G114200 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
8 Sobic.004G352500 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
9 Sobic.001G301800 CS domain containing protein, putative, expressed -
10 Sobic.006G276700 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
11 Sobic.009G020700 expressed protein -
12 Sobic.002G431100 OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed K00434: L-ascorbate peroxidase
13 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
14 Sobic.004G297700 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
15 Sobic.003G367451 - K08516: synaptobrevin homolog YKT6
16 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
17 Sobic.009G001400 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
18 Sobic.001G405800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
19 Sobic.010G188100 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
20 Sobic.007G171500 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed K00413: CYC1, CYT1, ubiquinol-cytochrome c reductase cytochrome c1 subunit


Gene co-expression network
sample Sobic003G336000 Sobic003G336000 Sobic010G027000 Sobic010G027000 Sobic003G336000--Sobic010G027000 Sobic002G355300 Sobic002G355300 Sobic003G336000--Sobic002G355300 Sobic001G503500 Sobic001G503500 Sobic003G336000--Sobic001G503500 Sobic009G217900 Sobic009G217900 Sobic003G336000--Sobic009G217900 Sobic004G058200 Sobic004G058200 Sobic003G336000--Sobic004G058200 Sobic010G026925 Sobic010G026925 Sobic003G336000--Sobic010G026925 Sobic007G114200 Sobic007G114200 Sobic003G336000--Sobic007G114200 Sobic004G352500 Sobic004G352500 Sobic003G336000--Sobic004G352500 Sobic001G301800 Sobic001G301800 Sobic003G336000--Sobic001G301800 Sobic010G027000--Sobic003G336000 Sobic002G291200 Sobic002G291200 Sobic010G027000--Sobic002G291200 Sobic010G277800 Sobic010G277800 Sobic010G027000--Sobic010G277800 Sobic010G027000--Sobic009G217900 Sobic002G358800 Sobic002G358800 Sobic010G027000--Sobic002G358800 Sobic010G027000--Sobic004G058200 Sobic003G243600 Sobic003G243600 Sobic010G027000--Sobic003G243600 Sobic001G406100 Sobic001G406100 Sobic010G027000--Sobic001G406100 Sobic002G358400 Sobic002G358400 Sobic010G027000--Sobic002G358400 Sobic003G386000 Sobic003G386000 Sobic002G355300--Sobic003G386000 Sobic001G040800 Sobic001G040800 Sobic002G355300--Sobic001G040800 Sobic004G055200 Sobic004G055200 Sobic002G355300--Sobic004G055200 Sobic006G232200 Sobic006G232200 Sobic002G355300--Sobic006G232200 Sobic003G155400 Sobic003G155400 Sobic002G355300--Sobic003G155400 Sobic002G222900 Sobic002G222900 Sobic002G355300--Sobic002G222900 Sobic001G459200 Sobic001G459200 Sobic002G355300--Sobic001G459200 Sobic007G019100 Sobic007G019100 Sobic002G355300--Sobic007G019100 Sobic004G170400 Sobic004G170400 Sobic002G355300--Sobic004G170400 Sobic001G503500--Sobic003G336000 Sobic003G440800 Sobic003G440800 Sobic001G503500--Sobic003G440800 Sobic005G111900 Sobic005G111900 Sobic001G503500--Sobic005G111900 Sobic003G349300 Sobic003G349300 Sobic001G503500--Sobic003G349300 Sobic006G281800 Sobic006G281800 Sobic001G503500--Sobic006G281800 Sobic007G171500 Sobic007G171500 Sobic001G503500--Sobic007G171500 Sobic001G503500--Sobic004G352500 Sobic005G033200 Sobic005G033200 Sobic001G503500--Sobic005G033200 Sobic001G503500--Sobic006G232200 Sobic004G130100 Sobic004G130100 Sobic009G217900--Sobic004G130100 Sobic002G363100 Sobic002G363100 Sobic009G217900--Sobic002G363100 Sobic001G501200 Sobic001G501200 Sobic009G217900--Sobic001G501200 Sobic010G205300 Sobic010G205300 Sobic009G217900--Sobic010G205300 Sobic009G217900--Sobic005G033200 Sobic010G042100 Sobic010G042100 Sobic009G217900--Sobic010G042100 Sobic001G314500 Sobic001G314500 Sobic009G217900--Sobic001G314500 Sobic009G217900--Sobic003G440800 Sobic009G198500 Sobic009G198500 Sobic009G217900--Sobic009G198500 Sobic010G188100 Sobic010G188100 Sobic004G058200--Sobic010G188100 Sobic009G135900 Sobic009G135900 Sobic004G058200--Sobic009G135900 Sobic004G058200--Sobic007G114200 Sobic001G358300 Sobic001G358300 Sobic004G058200--Sobic001G358300 Sobic004G058200--Sobic009G217900 Sobic004G058200--Sobic002G363100 Sobic004G058200--Sobic001G301800 Sobic003G395100 Sobic003G395100 Sobic004G058200--Sobic003G395100 Sobic001G328200 Sobic001G328200 Sobic004G058200--Sobic001G328200 Sobic010G026925--Sobic003G336000 Sobic010G026925--Sobic005G033200 Sobic006G276700 Sobic006G276700 Sobic010G026925--Sobic006G276700 Sobic010G026925--Sobic001G301800 Sobic001G290700 Sobic001G290700 Sobic010G026925--Sobic001G290700 Sobic006G178000 Sobic006G178000 Sobic010G026925--Sobic006G178000 Sobic003G216500 Sobic003G216500 Sobic010G026925--Sobic003G216500 Sobic010G026925--Sobic010G027000 Sobic009G017800 Sobic009G017800 Sobic010G026925--Sobic009G017800 Sobic007G045600 Sobic007G045600 Sobic007G114200--Sobic007G045600 Sobic003G367451 Sobic003G367451 Sobic007G114200--Sobic003G367451 Sobic001G236300 Sobic001G236300 Sobic007G114200--Sobic001G236300 Sobic009G001400 Sobic009G001400 Sobic007G114200--Sobic009G001400 Sobic002G428200 Sobic002G428200 Sobic007G114200--Sobic002G428200 Sobic006G252200 Sobic006G252200 Sobic007G114200--Sobic006G252200 Sobic002G214900 Sobic002G214900 Sobic007G114200--Sobic002G214900 Sobic004G327300 Sobic004G327300 Sobic007G114200--Sobic004G327300 Sobic004G138800 Sobic004G138800 Sobic007G114200--Sobic004G138800 Sobic003G001200 Sobic003G001200 Sobic004G352500--Sobic003G001200 Sobic004G352500--Sobic005G111900 Sobic003G370500 Sobic003G370500 Sobic004G352500--Sobic003G370500 Sobic007G061400 Sobic007G061400 Sobic004G352500--Sobic007G061400 Sobic007G071300 Sobic007G071300 Sobic004G352500--Sobic007G071300 Sobic004G297700 Sobic004G297700 Sobic004G352500--Sobic004G297700 Sobic004G352500--Sobic002G355300 Sobic001G282500 Sobic001G282500 Sobic004G352500--Sobic001G282500 Sobic001G391200 Sobic001G391200 Sobic004G352500--Sobic001G391200 Sobic001G301800--Sobic009G017800 Sobic001G301800--Sobic004G058200 Sobic001G301800--Sobic009G217900 Sobic001G301800--Sobic009G135900 Sobic001G301800--Sobic010G027000 Sobic001G301800--Sobic010G026925 Sobic001G301800--Sobic005G033200 Sobic001G301800--Sobic003G336000 Sobic010G019300 Sobic010G019300 Sobic001G301800--Sobic010G019300
Octagon: transcription factors


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