Gene annotation
Transcriptome id Sobic.009G020700.1
Synonym Sb09g001830
Functional annotation expressed protein
UniProt C5YYZ0
Pfam PF11069
Panther DB PTHR13238
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g02970.1 : expressed protein
MaizeGDB (Corn) Zm00025a040816
Brachypodium -
Barley -
Wheat TraesCS1B02G060200 , TraesCS1A02G046800
Populus -


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cDNA sequences
Sobic.009G020700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G336000 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed K15633: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2 Sobic.007G197200 peptidyl-prolyl isomerase, putative, expressed K09571: FK506-binding protein 4/5
3 Sobic.004G058200 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
4 Sobic.001G301800 CS domain containing protein, putative, expressed -
5 Sobic.002G431100 OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed K00434: L-ascorbate peroxidase
6 Sobic.010G026925 - K01689: ENO, enolase
7 Sobic.002G355300 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
8 Sobic.006G276700 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
9 Sobic.009G017800 glutathione S-transferase, N-terminal domain containing protein, expressed -
10 Sobic.010G019300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K18447: ADP-sugar diphosphatase
11 Sobic.001G405800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
12 Sobic.010G027000 enolase, putative, expressed K01689: ENO, enolase
13 Sobic.009G015700 actin-depolymerizing factor, putative, expressed K05765: cofilin
14 Sobic.005G033200 expressed protein -
15 Sobic.009G217900 expressed protein K06875: PDCD5, programmed cell death protein 5
16 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
17 Sobic.009G001400 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
18 Sobic.007G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein, putative, expressed K04079: HSP90A, molecular chaperone HtpG
19 Sobic.004G352500 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
20 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1


Gene co-expression network
sample Sobic009G020700 Sobic009G020700 Sobic003G336000 Sobic003G336000 Sobic009G020700--Sobic003G336000 Sobic007G197200 Sobic007G197200 Sobic009G020700--Sobic007G197200 Sobic004G058200 Sobic004G058200 Sobic009G020700--Sobic004G058200 Sobic001G301800 Sobic001G301800 Sobic009G020700--Sobic001G301800 Sobic002G431100 Sobic002G431100 Sobic009G020700--Sobic002G431100 Sobic010G026925 Sobic010G026925 Sobic009G020700--Sobic010G026925 Sobic002G355300 Sobic002G355300 Sobic009G020700--Sobic002G355300 Sobic006G276700 Sobic006G276700 Sobic009G020700--Sobic006G276700 Sobic009G017800 Sobic009G017800 Sobic009G020700--Sobic009G017800 Sobic010G027000 Sobic010G027000 Sobic003G336000--Sobic010G027000 Sobic003G336000--Sobic002G355300 Sobic001G503500 Sobic001G503500 Sobic003G336000--Sobic001G503500 Sobic009G217900 Sobic009G217900 Sobic003G336000--Sobic009G217900 Sobic003G336000--Sobic004G058200 Sobic003G336000--Sobic010G026925 Sobic007G114200 Sobic007G114200 Sobic003G336000--Sobic007G114200 Sobic004G352500 Sobic004G352500 Sobic003G336000--Sobic004G352500 Sobic003G336000--Sobic001G301800 Sobic009G067000 Sobic009G067000 Sobic007G197200--Sobic009G067000 Sobic007G197200--Sobic004G058200 Sobic005G017300 Sobic005G017300 Sobic007G197200--Sobic005G017300 Sobic010G277800 Sobic010G277800 Sobic007G197200--Sobic010G277800 Sobic001G355000 Sobic001G355000 Sobic007G197200--Sobic001G355000 Sobic007G197200--Sobic009G020700 Sobic007G216300 Sobic007G216300 Sobic007G197200--Sobic007G216300 Sobic007G139600 Sobic007G139600 Sobic007G197200--Sobic007G139600 Sobic007G197200--Sobic009G217900 Sobic010G188100 Sobic010G188100 Sobic004G058200--Sobic010G188100 Sobic009G135900 Sobic009G135900 Sobic004G058200--Sobic009G135900 Sobic004G058200--Sobic007G114200 Sobic001G358300 Sobic001G358300 Sobic004G058200--Sobic001G358300 Sobic004G058200--Sobic009G217900 Sobic002G363100 Sobic002G363100 Sobic004G058200--Sobic002G363100 Sobic004G058200--Sobic001G301800 Sobic003G395100 Sobic003G395100 Sobic004G058200--Sobic003G395100 Sobic001G328200 Sobic001G328200 Sobic004G058200--Sobic001G328200 Sobic001G301800--Sobic009G017800 Sobic001G301800--Sobic004G058200 Sobic001G301800--Sobic009G217900 Sobic001G301800--Sobic009G135900 Sobic001G301800--Sobic010G027000 Sobic001G301800--Sobic010G026925 Sobic005G033200 Sobic005G033200 Sobic001G301800--Sobic005G033200 Sobic001G301800--Sobic003G336000 Sobic010G019300 Sobic010G019300 Sobic001G301800--Sobic010G019300 Sobic005G194900 Sobic005G194900 Sobic002G431100--Sobic005G194900 Sobic002G431100--Sobic006G276700 Sobic004G162000 Sobic004G162000 Sobic002G431100--Sobic004G162000 Sobic001G031900 Sobic001G031900 Sobic002G431100--Sobic001G031900 Sobic004G282700 Sobic004G282700 Sobic002G431100--Sobic004G282700 Sobic002G431100--Sobic003G336000 Sobic010G185200 Sobic010G185200 Sobic002G431100--Sobic010G185200 Sobic006G058900 Sobic006G058900 Sobic002G431100--Sobic006G058900 Sobic004G297700 Sobic004G297700 Sobic002G431100--Sobic004G297700 Sobic010G026925--Sobic003G336000 Sobic010G026925--Sobic005G033200 Sobic010G026925--Sobic006G276700 Sobic010G026925--Sobic001G301800 Sobic001G290700 Sobic001G290700 Sobic010G026925--Sobic001G290700 Sobic006G178000 Sobic006G178000 Sobic010G026925--Sobic006G178000 Sobic003G216500 Sobic003G216500 Sobic010G026925--Sobic003G216500 Sobic010G026925--Sobic010G027000 Sobic010G026925--Sobic009G017800 Sobic003G386000 Sobic003G386000 Sobic002G355300--Sobic003G386000 Sobic001G040800 Sobic001G040800 Sobic002G355300--Sobic001G040800 Sobic004G055200 Sobic004G055200 Sobic002G355300--Sobic004G055200 Sobic006G232200 Sobic006G232200 Sobic002G355300--Sobic006G232200 Sobic003G155400 Sobic003G155400 Sobic002G355300--Sobic003G155400 Sobic002G222900 Sobic002G222900 Sobic002G355300--Sobic002G222900 Sobic001G459200 Sobic001G459200 Sobic002G355300--Sobic001G459200 Sobic007G019100 Sobic007G019100 Sobic002G355300--Sobic007G019100 Sobic004G170400 Sobic004G170400 Sobic002G355300--Sobic004G170400 Sobic006G276700--Sobic004G297700 Sobic001G282500 Sobic001G282500 Sobic006G276700--Sobic001G282500 Sobic010G032600 Sobic010G032600 Sobic006G276700--Sobic010G032600 Sobic001G073600 Sobic001G073600 Sobic006G276700--Sobic001G073600 Sobic002G395000 Sobic002G395000 Sobic006G276700--Sobic002G395000 Sobic003G135600 Sobic003G135600 Sobic006G276700--Sobic003G135600 Sobic004G202100 Sobic004G202100 Sobic006G276700--Sobic004G202100 Sobic007G023400 Sobic007G023400 Sobic006G276700--Sobic007G023400 Sobic007G171500 Sobic007G171500 Sobic006G276700--Sobic007G171500 Sobic009G015700 Sobic009G015700 Sobic009G017800--Sobic009G015700 Sobic009G017800--Sobic001G301800 Sobic001G496300 Sobic001G496300 Sobic009G017800--Sobic001G496300 Sobic001G020100 Sobic001G020100 Sobic009G017800--Sobic001G020100 Sobic001G447600 Sobic001G447600 Sobic009G017800--Sobic001G447600 Sobic006G097200 Sobic006G097200 Sobic009G017800--Sobic006G097200 Sobic003G380600 Sobic003G380600 Sobic009G017800--Sobic003G380600 Sobic009G017800--Sobic010G026925 Sobic001G407600 Sobic001G407600 Sobic009G017800--Sobic001G407600
Octagon: transcription factors


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