Gene annotation
Transcriptome id Sobic.007G197200.3,Sobic.007G197200.1,Sobic.007G197200.2
Synonym ATFKBP62, Sb07g026560, ROF1, FKBP62
Functional annotation peptidyl-prolyl isomerase, putative, expressed
UniProt A0A1B6PIP6 , A0A1B6PIQ0
Pfam PF07719 PF13414 PF00254
Panther DB PTHR10516 PTHR10516:SF324
NCBI CDD KOG0543; FKBP-type peptidyl-prolyl cis-trans isomerase
KEGG Orthology K09571; FK506-binding protein 4/5
Gene Ontology GO:0006457; protein folding


Orthologs (automatic annotation)
TAIR AT3G25230 : rotamase FKBP 1
RAP-DB (Rice) LOC_Os08g41390.2 : peptidyl-prolyl isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a005216
Brachypodium KQJ99076
Barley HORVU7Hr1G053170.11 , HORVU7Hr1G053170.13 , HORVU7Hr1G053170.14 , HORVU7Hr1G053170.10 , HORVU7Hr1G053170.5 , HORVU7Hr1G053170.4 , HORVU7Hr1G053170.7 , HORVU7Hr1G053170.6 , HORVU7Hr1G053170.1 , HORVU7Hr1G053170.3 , HORVU7Hr1G053170.2 , HORVU7Hr1G053170.9
Wheat TraesCS7A02G257100 , TraesCS7B02G153100 , TraesCS7D02G257300
Populus -


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cDNA sequences
Sobic.007G197200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G067000 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
2 Sobic.004G058200 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
3 Sobic.005G017300 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
4 Sobic.010G277800 lysM domain containing protein, putative, expressed -
5 Sobic.001G355000 CS domain containing protein, putative, expressed -
6 Sobic.009G020700 expressed protein -
7 Sobic.007G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein, putative, expressed K04079: HSP90A, molecular chaperone HtpG
8 Sobic.007G139600 DUF1336 domain containing protein, expressed -
9 Sobic.009G217900 expressed protein K06875: PDCD5, programmed cell death protein 5
10 Sobic.002G428200 26S protease regulatory subunit 4, putative, expressed K03062: PSMC1, 26S proteasome regulatory subunit T2
11 Sobic.007G152000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
12 Sobic.001G404100 expressed protein K03237: translation initiation factor 2 subunit 1
13 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin
14 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1
15 Sobic.001G007600 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
16 Sobic.002G419100 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
17 Sobic.001G421700 oxysterol-binding protein, putative, expressed -
18 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
19 Sobic.002G280200 Skp1 family, dimerisation domain containing protein, expressed K03094: SKP1, S-phase kinase-associated protein 1
20 Sobic.004G334000 similar to Putative uncharacterized protein(PubMedID : 29862293)@monogalactosyldiacylglycerol synthase, putative, expressed K03715: 1,2-diacylglycerol 3-beta-galactosyltransferase


Gene co-expression network
sample Sobic007G197200 Sobic007G197200 Sobic009G067000 Sobic009G067000 Sobic007G197200--Sobic009G067000 Sobic004G058200 Sobic004G058200 Sobic007G197200--Sobic004G058200 Sobic005G017300 Sobic005G017300 Sobic007G197200--Sobic005G017300 Sobic010G277800 Sobic010G277800 Sobic007G197200--Sobic010G277800 Sobic001G355000 Sobic001G355000 Sobic007G197200--Sobic001G355000 Sobic009G020700 Sobic009G020700 Sobic007G197200--Sobic009G020700 Sobic007G216300 Sobic007G216300 Sobic007G197200--Sobic007G216300 Sobic007G139600 Sobic007G139600 Sobic007G197200--Sobic007G139600 Sobic009G217900 Sobic009G217900 Sobic007G197200--Sobic009G217900 Sobic007G176200 Sobic007G176200 Sobic009G067000--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic009G067000--Sobic006G252200 Sobic001G458700 Sobic001G458700 Sobic009G067000--Sobic001G458700 Sobic001G007600 Sobic001G007600 Sobic009G067000--Sobic001G007600 Sobic002G428200 Sobic002G428200 Sobic009G067000--Sobic002G428200 Sobic001G010700 Sobic001G010700 Sobic009G067000--Sobic001G010700 Sobic007G114200 Sobic007G114200 Sobic009G067000--Sobic007G114200 Sobic004G224900 Sobic004G224900 Sobic009G067000--Sobic004G224900 Sobic001G283200 Sobic001G283200 Sobic009G067000--Sobic001G283200 Sobic010G188100 Sobic010G188100 Sobic004G058200--Sobic010G188100 Sobic009G135900 Sobic009G135900 Sobic004G058200--Sobic009G135900 Sobic004G058200--Sobic007G114200 Sobic001G358300 Sobic001G358300 Sobic004G058200--Sobic001G358300 Sobic004G058200--Sobic009G217900 Sobic002G363100 Sobic002G363100 Sobic004G058200--Sobic002G363100 Sobic001G301800 Sobic001G301800 Sobic004G058200--Sobic001G301800 Sobic003G395100 Sobic003G395100 Sobic004G058200--Sobic003G395100 Sobic001G328200 Sobic001G328200 Sobic004G058200--Sobic001G328200 Sobic004G138800 Sobic004G138800 Sobic005G017300--Sobic004G138800 Sobic009G182300 Sobic009G182300 Sobic005G017300--Sobic009G182300 Sobic005G017300--Sobic001G007600 Sobic001G096100 Sobic001G096100 Sobic005G017300--Sobic001G096100 Sobic002G309400 Sobic002G309400 Sobic005G017300--Sobic002G309400 Sobic002G060900 Sobic002G060900 Sobic005G017300--Sobic002G060900 Sobic003G290000 Sobic003G290000 Sobic005G017300--Sobic003G290000 Sobic005G017300--Sobic009G067000 Sobic007G092100 Sobic007G092100 Sobic005G017300--Sobic007G092100 Sobic010G042100 Sobic010G042100 Sobic010G277800--Sobic010G042100 Sobic001G040800 Sobic001G040800 Sobic010G277800--Sobic001G040800 Sobic009G185800 Sobic009G185800 Sobic010G277800--Sobic009G185800 Sobic007G088000 Sobic007G088000 Sobic010G277800--Sobic007G088000 Sobic002G204100 Sobic002G204100 Sobic010G277800--Sobic002G204100 Sobic005G034400 Sobic005G034400 Sobic010G277800--Sobic005G034400 Sobic004G272800 Sobic004G272800 Sobic010G277800--Sobic004G272800 Sobic002G291200 Sobic002G291200 Sobic010G277800--Sobic002G291200 Sobic003G253000 Sobic003G253000 Sobic010G277800--Sobic003G253000 Sobic007G152000 Sobic007G152000 Sobic001G355000--Sobic007G152000 Sobic004G036600 Sobic004G036600 Sobic001G355000--Sobic004G036600 Sobic002G280200 Sobic002G280200 Sobic001G355000--Sobic002G280200 Sobic001G355000--Sobic007G197200 Sobic009G217000 Sobic009G217000 Sobic001G355000--Sobic009G217000 Sobic001G355000--Sobic007G216300 Sobic006G193900 Sobic006G193900 Sobic001G355000--Sobic006G193900 Sobic002G362900 Sobic002G362900 Sobic001G355000--Sobic002G362900 Sobic010G210000 Sobic010G210000 Sobic001G355000--Sobic010G210000 Sobic003G336000 Sobic003G336000 Sobic009G020700--Sobic003G336000 Sobic009G020700--Sobic007G197200 Sobic009G020700--Sobic004G058200 Sobic009G020700--Sobic001G301800 Sobic002G431100 Sobic002G431100 Sobic009G020700--Sobic002G431100 Sobic010G026925 Sobic010G026925 Sobic009G020700--Sobic010G026925 Sobic002G355300 Sobic002G355300 Sobic009G020700--Sobic002G355300 Sobic006G276700 Sobic006G276700 Sobic009G020700--Sobic006G276700 Sobic009G017800 Sobic009G017800 Sobic009G020700--Sobic009G017800 Sobic001G064500 Sobic001G064500 Sobic007G216300--Sobic001G064500 Sobic004G055200 Sobic004G055200 Sobic007G216300--Sobic004G055200 Sobic003G136000 Sobic003G136000 Sobic007G216300--Sobic003G136000 Sobic001G032800 Sobic001G032800 Sobic007G216300--Sobic001G032800 Sobic010G223600 Sobic010G223600 Sobic007G216300--Sobic010G223600 Sobic004G330700 Sobic004G330700 Sobic007G216300--Sobic004G330700 Sobic003G310700 Sobic003G310700 Sobic007G216300--Sobic003G310700 Sobic009G129000 Sobic009G129000 Sobic007G216300--Sobic009G129000 Sobic003G130800 Sobic003G130800 Sobic007G216300--Sobic003G130800 Sobic007G139600--Sobic010G277800 Sobic007G139600--Sobic001G040800 Sobic007G139600--Sobic007G088000 Sobic002G202300 Sobic002G202300 Sobic007G139600--Sobic002G202300 Sobic001G433700 Sobic001G433700 Sobic007G139600--Sobic001G433700 Sobic008G033600 Sobic008G033600 Sobic007G139600--Sobic008G033600 Sobic009G001400 Sobic009G001400 Sobic007G139600--Sobic009G001400 Sobic010G232100 Sobic010G232100 Sobic007G139600--Sobic010G232100 Sobic003G220600 Sobic003G220600 Sobic007G139600--Sobic003G220600 Sobic004G130100 Sobic004G130100 Sobic009G217900--Sobic004G130100 Sobic009G217900--Sobic002G363100 Sobic001G501200 Sobic001G501200 Sobic009G217900--Sobic001G501200 Sobic010G205300 Sobic010G205300 Sobic009G217900--Sobic010G205300 Sobic005G033200 Sobic005G033200 Sobic009G217900--Sobic005G033200 Sobic009G217900--Sobic010G042100 Sobic001G314500 Sobic001G314500 Sobic009G217900--Sobic001G314500 Sobic003G440800 Sobic003G440800 Sobic009G217900--Sobic003G440800 Sobic009G198500 Sobic009G198500 Sobic009G217900--Sobic009G198500
Octagon: transcription factors


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