Gene annotation
Transcriptome id Sobic.001G355000.1
Synonym
Functional annotation CS domain containing protein, putative, expressed
UniProt A0A1B6QMY3
Pfam PF04969
Panther DB PTHR22932
NCBI CDD KOG3158; HSP90 co-chaperone p23
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02450 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os03g26460.1 : CS domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a052077
Brachypodium KQK21485
Barley -
Wheat TraesCS1B02G068200
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G355000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G152000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
2 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
3 Sobic.002G280200 Skp1 family, dimerisation domain containing protein, expressed K03094: SKP1, S-phase kinase-associated protein 1
4 Sobic.007G197200 peptidyl-prolyl isomerase, putative, expressed K09571: FK506-binding protein 4/5
5 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
6 Sobic.007G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein, putative, expressed K04079: HSP90A, molecular chaperone HtpG
7 Sobic.006G193900 DUF581 domain containing protein, expressed -
8 Sobic.002G362900 IBS1, putative, expressed -
9 Sobic.010G210000 ubiquitin family protein, putative, expressed K12158: ubiquitin-like protein Nedd8
10 Sobic.002G043300 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
11 Sobic.006G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein STI, putative, expressed K09553: stress-induced-phosphoprotein 1
12 Sobic.001G416600 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
13 Sobic.006G131400 expressed protein -
14 Sobic.002G301300 SNF7 domain containing protein, putative, expressed K12193: VPS24, charged multivesicular body protein 3
15 Sobic.009G182300 - -
16 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
17 Sobic.001G064500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
18 Sobic.010G065900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@formin-like protein 13, putative, expressed -
19 Sobic.007G188100 Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
20 Sobic.009G220200 exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic001G355000 Sobic001G355000 Sobic007G152000 Sobic007G152000 Sobic001G355000--Sobic007G152000 Sobic004G036600 Sobic004G036600 Sobic001G355000--Sobic004G036600 Sobic002G280200 Sobic002G280200 Sobic001G355000--Sobic002G280200 Sobic007G197200 Sobic007G197200 Sobic001G355000--Sobic007G197200 Sobic009G217000 Sobic009G217000 Sobic001G355000--Sobic009G217000 Sobic007G216300 Sobic007G216300 Sobic001G355000--Sobic007G216300 Sobic006G193900 Sobic006G193900 Sobic001G355000--Sobic006G193900 Sobic002G362900 Sobic002G362900 Sobic001G355000--Sobic002G362900 Sobic010G210000 Sobic010G210000 Sobic001G355000--Sobic010G210000 Sobic007G152000--Sobic007G216300 Sobic001G064500 Sobic001G064500 Sobic007G152000--Sobic001G064500 Sobic009G231400 Sobic009G231400 Sobic007G152000--Sobic009G231400 Sobic007G152000--Sobic004G036600 Sobic004G249900 Sobic004G249900 Sobic007G152000--Sobic004G249900 Sobic007G152000--Sobic001G355000 Sobic001G093200 Sobic001G093200 Sobic007G152000--Sobic001G093200 Sobic007G152000--Sobic006G193900 Sobic009G208800 Sobic009G208800 Sobic007G152000--Sobic009G208800 Sobic002G294700 Sobic002G294700 Sobic004G036600--Sobic002G294700 Sobic008G177800 Sobic008G177800 Sobic004G036600--Sobic008G177800 Sobic006G231100 Sobic006G231100 Sobic004G036600--Sobic006G231100 Sobic001G173300 Sobic001G173300 Sobic004G036600--Sobic001G173300 Sobic010G234600 Sobic010G234600 Sobic004G036600--Sobic010G234600 Sobic001G516600 Sobic001G516600 Sobic004G036600--Sobic001G516600 Sobic002G374100 Sobic002G374100 Sobic004G036600--Sobic002G374100 Sobic009G141800 Sobic009G141800 Sobic004G036600--Sobic009G141800 Sobic004G036600--Sobic009G217000 Sobic006G062800 Sobic006G062800 Sobic002G280200--Sobic006G062800 Sobic010G213400 Sobic010G213400 Sobic002G280200--Sobic010G213400 Sobic002G116200 Sobic002G116200 Sobic002G280200--Sobic002G116200 Sobic005G111100 Sobic005G111100 Sobic002G280200--Sobic005G111100 Sobic003G362400 Sobic003G362400 Sobic002G280200--Sobic003G362400 Sobic010G150575 Sobic010G150575 Sobic002G280200--Sobic010G150575 Sobic003G018600 Sobic003G018600 Sobic002G280200--Sobic003G018600 Sobic001G066700 Sobic001G066700 Sobic002G280200--Sobic001G066700 Sobic006G131400 Sobic006G131400 Sobic002G280200--Sobic006G131400 Sobic009G067000 Sobic009G067000 Sobic007G197200--Sobic009G067000 Sobic004G058200 Sobic004G058200 Sobic007G197200--Sobic004G058200 Sobic005G017300 Sobic005G017300 Sobic007G197200--Sobic005G017300 Sobic010G277800 Sobic010G277800 Sobic007G197200--Sobic010G277800 Sobic007G197200--Sobic001G355000 Sobic009G020700 Sobic009G020700 Sobic007G197200--Sobic009G020700 Sobic007G197200--Sobic007G216300 Sobic007G139600 Sobic007G139600 Sobic007G197200--Sobic007G139600 Sobic009G217900 Sobic009G217900 Sobic007G197200--Sobic009G217900 Sobic009G217000--Sobic004G036600 Sobic003G094200 Sobic003G094200 Sobic009G217000--Sobic003G094200 Sobic003G310700 Sobic003G310700 Sobic009G217000--Sobic003G310700 Sobic010G065900 Sobic010G065900 Sobic009G217000--Sobic010G065900 Sobic009G217000--Sobic006G131400 Sobic004G065500 Sobic004G065500 Sobic009G217000--Sobic004G065500 Sobic009G217000--Sobic009G141800 Sobic005G028700 Sobic005G028700 Sobic009G217000--Sobic005G028700 Sobic006G267200 Sobic006G267200 Sobic009G217000--Sobic006G267200 Sobic007G216300--Sobic001G064500 Sobic004G055200 Sobic004G055200 Sobic007G216300--Sobic004G055200 Sobic003G136000 Sobic003G136000 Sobic007G216300--Sobic003G136000 Sobic001G032800 Sobic001G032800 Sobic007G216300--Sobic001G032800 Sobic010G223600 Sobic010G223600 Sobic007G216300--Sobic010G223600 Sobic004G330700 Sobic004G330700 Sobic007G216300--Sobic004G330700 Sobic007G216300--Sobic003G310700 Sobic009G129000 Sobic009G129000 Sobic007G216300--Sobic009G129000 Sobic003G130800 Sobic003G130800 Sobic007G216300--Sobic003G130800 Sobic004G278200 Sobic004G278200 Sobic006G193900--Sobic004G278200 Sobic006G193900--Sobic009G208800 Sobic004G257300 Sobic004G257300 Sobic006G193900--Sobic004G257300 Sobic001G489600 Sobic001G489600 Sobic006G193900--Sobic001G489600 Sobic004G321000 Sobic004G321000 Sobic006G193900--Sobic004G321000 Sobic009G163900 Sobic009G163900 Sobic006G193900--Sobic009G163900 Sobic007G057100 Sobic007G057100 Sobic006G193900--Sobic007G057100 Sobic001G051600 Sobic001G051600 Sobic006G193900--Sobic001G051600 Sobic006G193900--Sobic009G231400 Sobic007G188100 Sobic007G188100 Sobic002G362900--Sobic007G188100 Sobic006G087900 Sobic006G087900 Sobic002G362900--Sobic006G087900 Sobic009G220200 Sobic009G220200 Sobic002G362900--Sobic009G220200 Sobic002G362900--Sobic009G208800 Sobic004G145200 Sobic004G145200 Sobic002G362900--Sobic004G145200 Sobic005G231700 Sobic005G231700 Sobic002G362900--Sobic005G231700 Sobic008G016900 Sobic008G016900 Sobic002G362900--Sobic008G016900 Sobic010G228000 Sobic010G228000 Sobic002G362900--Sobic010G228000 Sobic001G409900 Sobic001G409900 Sobic002G362900--Sobic001G409900 Sobic010G210000--Sobic003G018600 Sobic002G376500 Sobic002G376500 Sobic010G210000--Sobic002G376500 Sobic006G115000 Sobic006G115000 Sobic010G210000--Sobic006G115000 Sobic010G210000--Sobic003G362400 Sobic009G012700 Sobic009G012700 Sobic010G210000--Sobic009G012700 Sobic009G050200 Sobic009G050200 Sobic010G210000--Sobic009G050200 Sobic003G073900 Sobic003G073900 Sobic010G210000--Sobic003G073900 Sobic001G018800 Sobic001G018800 Sobic010G210000--Sobic001G018800 Sobic004G062400 Sobic004G062400 Sobic010G210000--Sobic004G062400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.