Gene annotation
Transcriptome id Sobic.007G139600.1
Synonym Sb07g021510
Functional annotation DUF1336 domain containing protein, expressed
UniProt C5YLB0
Pfam PF01852 PF07059
Panther DB PTHR12136 PTHR12136:SF49
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008289; lipid binding


Orthologs (automatic annotation)
TAIR AT5G35180 : Protein of unknown function (DUF1336)
RAP-DB (Rice) LOC_Os08g34060.1 : DUF1336 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005891 , Zm00025a005865 , Zm00025a005869
Brachypodium KQJ98445
Barley HORVU5Hr1G053070.8 , HORVU5Hr1G053070.9 , HORVU5Hr1G053070.6 , HORVU5Hr1G053070.7 , HORVU5Hr1G053070.4 , HORVU5Hr1G053070.5 , HORVU5Hr1G053070.2 , HORVU5Hr1G053070.3 , HORVU5Hr1G053070.1 , HORVU5Hr1G053070.14 , HORVU5Hr1G053070.15 , HORVU5Hr1G053070.10 , HORVU5Hr1G053070.11 , HORVU5Hr1G053070.12 , HORVU5Hr1G053070.13
Wheat TraesCS5B02G170400 , TraesCS5A02G173000 , TraesCS5B02G170400 , TraesCS5B02G170400 , TraesCS5B02G170400 , TraesCS5B02G170400 , TraesCS5B02G170400 , TraesCS5D02G177500 , TraesCS5D02G177500 , TraesCS5D02G177500 , TraesCS5D02G177500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G277800 lysM domain containing protein, putative, expressed -
2 Sobic.001G040800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
3 Sobic.007G088000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
4 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
5 Sobic.001G433700 chorismate synthase 2, chloroplast precursor, putative, expressed K01736: chorismate synthase
6 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
7 Sobic.009G001400 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
8 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
9 Sobic.003G220600 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
10 Sobic.005G034400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
11 Sobic.007G114200 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
12 Sobic.002G291200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
13 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
14 Sobic.001G335400 protein of unknown function DUF1675 domain containing protein, expressed -
15 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
16 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
17 Sobic.002G194100 annexin, putative, expressed K17095: annexin A7/11
18 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
19 Sobic.006G264300 GA18008-PA, putative, expressed -
20 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit


Gene co-expression network
sample Sobic007G139600 Sobic007G139600 Sobic010G277800 Sobic010G277800 Sobic007G139600--Sobic010G277800 Sobic001G040800 Sobic001G040800 Sobic007G139600--Sobic001G040800 Sobic007G088000 Sobic007G088000 Sobic007G139600--Sobic007G088000 Sobic002G202300 Sobic002G202300 Sobic007G139600--Sobic002G202300 Sobic001G433700 Sobic001G433700 Sobic007G139600--Sobic001G433700 Sobic008G033600 Sobic008G033600 Sobic007G139600--Sobic008G033600 Sobic009G001400 Sobic009G001400 Sobic007G139600--Sobic009G001400 Sobic010G232100 Sobic010G232100 Sobic007G139600--Sobic010G232100 Sobic003G220600 Sobic003G220600 Sobic007G139600--Sobic003G220600 Sobic010G042100 Sobic010G042100 Sobic010G277800--Sobic010G042100 Sobic010G277800--Sobic001G040800 Sobic009G185800 Sobic009G185800 Sobic010G277800--Sobic009G185800 Sobic010G277800--Sobic007G088000 Sobic002G204100 Sobic002G204100 Sobic010G277800--Sobic002G204100 Sobic005G034400 Sobic005G034400 Sobic010G277800--Sobic005G034400 Sobic004G272800 Sobic004G272800 Sobic010G277800--Sobic004G272800 Sobic002G291200 Sobic002G291200 Sobic010G277800--Sobic002G291200 Sobic003G253000 Sobic003G253000 Sobic010G277800--Sobic003G253000 Sobic002G194100 Sobic002G194100 Sobic001G040800--Sobic002G194100 Sobic001G040800--Sobic003G253000 Sobic001G040800--Sobic009G001400 Sobic002G363100 Sobic002G363100 Sobic001G040800--Sobic002G363100 Sobic001G040800--Sobic002G202300 Sobic003G130800 Sobic003G130800 Sobic001G040800--Sobic003G130800 Sobic002G355300 Sobic002G355300 Sobic001G040800--Sobic002G355300 Sobic007G114200 Sobic007G114200 Sobic001G040800--Sobic007G114200 Sobic001G040800--Sobic007G088000 Sobic003G306100 Sobic003G306100 Sobic007G088000--Sobic003G306100 Sobic004G055200 Sobic004G055200 Sobic007G088000--Sobic004G055200 Sobic004G187900 Sobic004G187900 Sobic007G088000--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic007G088000--Sobic001G281400 Sobic009G141800 Sobic009G141800 Sobic007G088000--Sobic009G141800 Sobic007G088000--Sobic001G040800 Sobic001G459200 Sobic001G459200 Sobic007G088000--Sobic001G459200 Sobic006G099700 Sobic006G099700 Sobic007G088000--Sobic006G099700 Sobic001G499300 Sobic001G499300 Sobic007G088000--Sobic001G499300 Sobic002G202300--Sobic003G253000 Sobic002G202300--Sobic003G220600 Sobic006G141500 Sobic006G141500 Sobic002G202300--Sobic006G141500 Sobic006G264300 Sobic006G264300 Sobic002G202300--Sobic006G264300 Sobic002G046100 Sobic002G046100 Sobic002G202300--Sobic002G046100 Sobic003G115800 Sobic003G115800 Sobic002G202300--Sobic003G115800 Sobic010G204300 Sobic010G204300 Sobic002G202300--Sobic010G204300 Sobic006G062800 Sobic006G062800 Sobic002G202300--Sobic006G062800 Sobic006G182100 Sobic006G182100 Sobic002G202300--Sobic006G182100 Sobic009G149400 Sobic009G149400 Sobic001G433700--Sobic009G149400 Sobic001G018800 Sobic001G018800 Sobic001G433700--Sobic001G018800 Sobic002G187500 Sobic002G187500 Sobic001G433700--Sobic002G187500 Sobic010G023800 Sobic010G023800 Sobic001G433700--Sobic010G023800 Sobic002G084500 Sobic002G084500 Sobic001G433700--Sobic002G084500 Sobic001G224400 Sobic001G224400 Sobic001G433700--Sobic001G224400 Sobic001G433700--Sobic004G272800 Sobic001G132100 Sobic001G132100 Sobic001G433700--Sobic001G132100 Sobic010G154700 Sobic010G154700 Sobic001G433700--Sobic010G154700 Sobic008G033600--Sobic004G055200 Sobic006G173900 Sobic006G173900 Sobic008G033600--Sobic006G173900 Sobic008G033600--Sobic004G187900 Sobic008G033600--Sobic001G281400 Sobic002G267500 Sobic002G267500 Sobic008G033600--Sobic002G267500 Sobic003G377900 Sobic003G377900 Sobic008G033600--Sobic003G377900 Sobic009G008900 Sobic009G008900 Sobic008G033600--Sobic009G008900 Sobic008G033600--Sobic001G459200 Sobic010G149300 Sobic010G149300 Sobic008G033600--Sobic010G149300 Sobic009G001400--Sobic007G114200 Sobic010G188100 Sobic010G188100 Sobic009G001400--Sobic010G188100 Sobic009G001400--Sobic001G040800 Sobic003G367451 Sobic003G367451 Sobic009G001400--Sobic003G367451 Sobic009G001400--Sobic002G363100 Sobic001G220400 Sobic001G220400 Sobic009G001400--Sobic001G220400 Sobic009G001400--Sobic006G182100 Sobic010G018400 Sobic010G018400 Sobic009G001400--Sobic010G018400 Sobic009G001400--Sobic003G220600 Sobic010G232100--Sobic004G055200 Sobic008G025500 Sobic008G025500 Sobic010G232100--Sobic008G025500 Sobic010G232100--Sobic003G130800 Sobic010G178200 Sobic010G178200 Sobic010G232100--Sobic010G178200 Sobic006G180200 Sobic006G180200 Sobic010G232100--Sobic006G180200 Sobic009G046600 Sobic009G046600 Sobic010G232100--Sobic009G046600 Sobic003G380000 Sobic003G380000 Sobic010G232100--Sobic003G380000 Sobic004G219300 Sobic004G219300 Sobic010G232100--Sobic004G219300 Sobic010G232100--Sobic006G099700 Sobic003G248600 Sobic003G248600 Sobic003G220600--Sobic003G248600 Sobic003G220600--Sobic002G202300 Sobic003G220600--Sobic003G253000 Sobic003G220600--Sobic003G115800 Sobic007G059900 Sobic007G059900 Sobic003G220600--Sobic007G059900 Sobic004G293700 Sobic004G293700 Sobic003G220600--Sobic004G293700 Sobic004G300900 Sobic004G300900 Sobic003G220600--Sobic004G300900 Sobic003G220600--Sobic003G367451 Sobic009G146100 Sobic009G146100 Sobic003G220600--Sobic009G146100
Octagon: transcription factors


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