Gene annotation
Transcriptome id Sobic.004G009800.1,Sobic.004G009800.2
Synonym
Functional annotation -
UniProt A0A194YN75
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G162000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
2 Sobic.006G025900 - -
3 Sobic.003G143000 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
4 Sobic.001G342300 Translation elongation factor EF1B("PubMedID : 26759170,PubMedID : 24597475")@elongation factor protein, putative, expressed K03232: elongation factor 1-beta
5 Sobic.001G504100 - -
6 Sobic.006G234466 - -
7 Sobic.003G076900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Sulfoquinovosyldiacylglycerol 2, UDP-glycosyltransferase SQD2 (At)"(PubMedID : 27208977)@glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
8 Sobic.008G026000 expressed protein -
9 Sobic.008G036800 alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed -
10 Sobic.010G185200 SPX domain containing protein, putative, expressed -
11 Sobic.002G431100 OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed K00434: L-ascorbate peroxidase
12 Sobic.003G430500 OsCML23 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
13 Sobic.002G368600 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
14 Sobic.001G342400 SPX domain-3("PubMedID : 26759170,PubMedID : 24597475")@SPX domain-containing protein, putative, expressed -
15 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.007G190700 Glycerophosphodiester phosphodiesterase (At)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
17 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
18 Sobic.006G026000 - -
19 Sobic.004G165100 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@RCN2 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
20 Sobic.008G187200 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed -


Gene co-expression network
sample Sobic004G009800 Sobic004G009800 Sobic004G162000 Sobic004G162000 Sobic004G009800--Sobic004G162000 Sobic006G025900 Sobic006G025900 Sobic004G009800--Sobic006G025900 Sobic003G143000 Sobic003G143000 Sobic004G009800--Sobic003G143000 Sobic001G342300 Sobic001G342300 Sobic004G009800--Sobic001G342300 Sobic001G504100 Sobic001G504100 Sobic004G009800--Sobic001G504100 Sobic006G234466 Sobic006G234466 Sobic004G009800--Sobic006G234466 Sobic003G076900 Sobic003G076900 Sobic004G009800--Sobic003G076900 Sobic008G026000 Sobic008G026000 Sobic004G009800--Sobic008G026000 Sobic008G036800 Sobic008G036800 Sobic004G009800--Sobic008G036800 Sobic002G078300 Sobic002G078300 Sobic004G162000--Sobic002G078300 Sobic001G095632 Sobic001G095632 Sobic004G162000--Sobic001G095632 Sobic003G305100 Sobic003G305100 Sobic004G162000--Sobic003G305100 Sobic002G263100 Sobic002G263100 Sobic004G162000--Sobic002G263100 Sobic005G194900 Sobic005G194900 Sobic004G162000--Sobic005G194900 Sobic002G309700 Sobic002G309700 Sobic004G162000--Sobic002G309700 Sobic005G168100 Sobic005G168100 Sobic004G162000--Sobic005G168100 Sobic001G087900 Sobic001G087900 Sobic004G162000--Sobic001G087900 Sobic002G431100 Sobic002G431100 Sobic004G162000--Sobic002G431100 Sobic009G038100 Sobic009G038100 Sobic006G025900--Sobic009G038100 Sobic001G189300 Sobic001G189300 Sobic006G025900--Sobic001G189300 Sobic009G121900 Sobic009G121900 Sobic006G025900--Sobic009G121900 Sobic001G052000 Sobic001G052000 Sobic006G025900--Sobic001G052000 Sobic006G026000 Sobic006G026000 Sobic006G025900--Sobic006G026000 Sobic001G032000 Sobic001G032000 Sobic006G025900--Sobic001G032000 Sobic003G341600 Sobic003G341600 Sobic006G025900--Sobic003G341600 Sobic001G280800 Sobic001G280800 Sobic006G025900--Sobic001G280800 Sobic006G025900--Sobic008G036800 Sobic003G020400 Sobic003G020400 Sobic003G143000--Sobic003G020400 Sobic010G045500 Sobic010G045500 Sobic003G143000--Sobic010G045500 Sobic001G232700 Sobic001G232700 Sobic003G143000--Sobic001G232700 Sobic007G054900 Sobic007G054900 Sobic003G143000--Sobic007G054900 Sobic004G159500 Sobic004G159500 Sobic003G143000--Sobic004G159500 Sobic002G391800 Sobic002G391800 Sobic003G143000--Sobic002G391800 Sobic004G292600 Sobic004G292600 Sobic003G143000--Sobic004G292600 Sobic003G430500 Sobic003G430500 Sobic003G143000--Sobic003G430500 Sobic010G009900 Sobic010G009900 Sobic003G143000--Sobic010G009900 Sobic008G002800 Sobic008G002800 Sobic001G342300--Sobic008G002800 Sobic001G342300--Sobic002G391800 Sobic001G342300--Sobic001G232700 Sobic003G206400 Sobic003G206400 Sobic001G342300--Sobic003G206400 Sobic003G317900 Sobic003G317900 Sobic001G342300--Sobic003G317900 Sobic002G377600 Sobic002G377600 Sobic001G342300--Sobic002G377600 Sobic002G063600 Sobic002G063600 Sobic001G342300--Sobic002G063600 Sobic005G038100 Sobic005G038100 Sobic001G342300--Sobic005G038100 Sobic001G342300--Sobic004G159500 Sobic001G342400 Sobic001G342400 Sobic001G504100--Sobic001G342400 Sobic001G504100--Sobic006G234466 Sobic001G234900 Sobic001G234900 Sobic001G504100--Sobic001G234900 Sobic001G504100--Sobic002G391800 Sobic005G222500 Sobic005G222500 Sobic001G504100--Sobic005G222500 Sobic010G211400 Sobic010G211400 Sobic001G504100--Sobic010G211400 Sobic002G301900 Sobic002G301900 Sobic001G504100--Sobic002G301900 Sobic010G270700 Sobic010G270700 Sobic001G504100--Sobic010G270700 Sobic006G089000 Sobic006G089000 Sobic001G504100--Sobic006G089000 Sobic006G234466--Sobic010G045500 Sobic006G234466--Sobic001G342400 Sobic006G234466--Sobic001G504100 Sobic006G234466--Sobic002G301900 Sobic006G050800 Sobic006G050800 Sobic006G234466--Sobic006G050800 Sobic006G234466--Sobic010G270700 Sobic008G009400 Sobic008G009400 Sobic006G234466--Sobic008G009400 Sobic001G242000 Sobic001G242000 Sobic006G234466--Sobic001G242000 Sobic006G234466--Sobic001G234900 Sobic007G211900 Sobic007G211900 Sobic003G076900--Sobic007G211900 Sobic010G185200 Sobic010G185200 Sobic003G076900--Sobic010G185200 Sobic004G084900 Sobic004G084900 Sobic003G076900--Sobic004G084900 Sobic003G076900--Sobic010G211400 Sobic003G076900--Sobic001G504100 Sobic001G442300 Sobic001G442300 Sobic003G076900--Sobic001G442300 Sobic010G083500 Sobic010G083500 Sobic003G076900--Sobic010G083500 Sobic010G165500 Sobic010G165500 Sobic003G076900--Sobic010G165500 Sobic001G027300 Sobic001G027300 Sobic003G076900--Sobic001G027300 Sobic006G198000 Sobic006G198000 Sobic008G026000--Sobic006G198000 Sobic008G026000--Sobic004G292600 Sobic009G197100 Sobic009G197100 Sobic008G026000--Sobic009G197100 Sobic004G165100 Sobic004G165100 Sobic008G026000--Sobic004G165100 Sobic008G184700 Sobic008G184700 Sobic008G026000--Sobic008G184700 Sobic001G539300 Sobic001G539300 Sobic008G026000--Sobic001G539300 Sobic002G012300 Sobic002G012300 Sobic008G036800--Sobic002G012300 Sobic002G012500 Sobic002G012500 Sobic008G036800--Sobic002G012500 Sobic008G022000 Sobic008G022000 Sobic008G036800--Sobic008G022000 Sobic008G158600 Sobic008G158600 Sobic008G036800--Sobic008G158600 Sobic008G158501 Sobic008G158501 Sobic008G036800--Sobic008G158501 Sobic003G426600 Sobic003G426600 Sobic008G036800--Sobic003G426600 Sobic008G066200 Sobic008G066200 Sobic008G036800--Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic008G036800--Sobic006G008000 Sobic002G044600 Sobic002G044600 Sobic008G036800--Sobic002G044600
Octagon: transcription factors


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