Gene annotation
Transcriptome id Sobic.006G026000.1
Synonym
Functional annotation -
UniProt A0A1B6PJR0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G025900 - -
2 Sobic.001G012500 similar to Glutathione S transferase 1(PubMedID : 24655390)@"Glutathione S transferase 1, up-regulated under all the stress condition"(PubMedID : 24655390)@similar to Glutathione S transferase 1(PubMedID : 24655390)@Glutathione S transferase 1(PubMedID : 24655390)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.006G201700 wall-associated kinase 1, putative, expressed -
4 Sobic.010G115600 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
5 Sobic.006G026600 expressed protein -
6 Sobic.004G059600 DUF581 domain containing protein, expressed -
7 Sobic.007G052700 acyl CoA binding protein, putative, expressed K08762: DBI, diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
8 Sobic.009G176800 DUF567 domain containing protein, putative, expressed -
9 Sobic.001G035600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@induced by either light or pathogen inoculation in the BTx623 seedlings(PubMedID : 20529887)@"The bmr30 mutant harbors a mutation in a phenylpropanoid biosynthetic gene that is key to the interconnection between flavonoids and monolignols, both of which are utilized for lignin synthesis in the grasses."(PubMedID : 34925394)@expressed protein K01859: chalcone isomerase
10 Sobic.010G102050 - -
11 Sobic.004G323900 protein kinase, putative, expressed K09553: stress-induced-phosphoprotein 1
12 Sobic.001G189300 AMP-binding domain containing protein, expressed -
13 Sobic.010G083500 pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed K17872: NDC1, demethylphylloquinone reductase
14 Sobic.005G096101 - -
15 Sobic.007G147800 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR33 - Auxin-responsive SAUR gene family member, expressed -
16 Sobic.002G431100 OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed K00434: L-ascorbate peroxidase
17 Sobic.002G226300 OsCML10 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
18 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
19 Sobic.004G121900 expansin precursor, putative, expressed -
20 Sobic.010G050800 OsPOP11 - Putative Prolyl Oligopeptidase homologue, expressed -


Gene co-expression network
sample Sobic006G026000 Sobic006G026000 Sobic006G025900 Sobic006G025900 Sobic006G026000--Sobic006G025900 Sobic001G012500 Sobic001G012500 Sobic006G026000--Sobic001G012500 Sobic006G201700 Sobic006G201700 Sobic006G026000--Sobic006G201700 Sobic010G115600 Sobic010G115600 Sobic006G026000--Sobic010G115600 Sobic006G026600 Sobic006G026600 Sobic006G026000--Sobic006G026600 Sobic004G059600 Sobic004G059600 Sobic006G026000--Sobic004G059600 Sobic007G052700 Sobic007G052700 Sobic006G026000--Sobic007G052700 Sobic009G176800 Sobic009G176800 Sobic006G026000--Sobic009G176800 Sobic001G035600 Sobic001G035600 Sobic006G026000--Sobic001G035600 Sobic009G038100 Sobic009G038100 Sobic006G025900--Sobic009G038100 Sobic001G189300 Sobic001G189300 Sobic006G025900--Sobic001G189300 Sobic009G121900 Sobic009G121900 Sobic006G025900--Sobic009G121900 Sobic001G052000 Sobic001G052000 Sobic006G025900--Sobic001G052000 Sobic006G025900--Sobic006G026000 Sobic001G032000 Sobic001G032000 Sobic006G025900--Sobic001G032000 Sobic003G341600 Sobic003G341600 Sobic006G025900--Sobic003G341600 Sobic001G280800 Sobic001G280800 Sobic006G025900--Sobic001G280800 Sobic008G036800 Sobic008G036800 Sobic006G025900--Sobic008G036800 Sobic001G012400 Sobic001G012400 Sobic001G012500--Sobic001G012400 Sobic002G347300 Sobic002G347300 Sobic001G012500--Sobic002G347300 Sobic001G012600 Sobic001G012600 Sobic001G012500--Sobic001G012600 Sobic002G338400 Sobic002G338400 Sobic001G012500--Sobic002G338400 Sobic001G012500--Sobic001G035600 Sobic001G012200 Sobic001G012200 Sobic001G012500--Sobic001G012200 Sobic001G012300 Sobic001G012300 Sobic001G012500--Sobic001G012300 Sobic003G340800 Sobic003G340800 Sobic001G012500--Sobic003G340800 Sobic009G232200 Sobic009G232200 Sobic001G012500--Sobic009G232200 Sobic008G099600 Sobic008G099600 Sobic006G201700--Sobic008G099600 Sobic010G015800 Sobic010G015800 Sobic006G201700--Sobic010G015800 Sobic006G021900 Sobic006G021900 Sobic006G201700--Sobic006G021900 Sobic007G089900 Sobic007G089900 Sobic006G201700--Sobic007G089900 Sobic010G122200 Sobic010G122200 Sobic006G201700--Sobic010G122200 Sobic005G154100 Sobic005G154100 Sobic006G201700--Sobic005G154100 Sobic009G190500 Sobic009G190500 Sobic006G201700--Sobic009G190500 Sobic002G067300 Sobic002G067300 Sobic006G201700--Sobic002G067300 Sobic004G323900 Sobic004G323900 Sobic006G201700--Sobic004G323900 Sobic001G002800 Sobic001G002800 Sobic010G115600--Sobic001G002800 Sobic003G053500 Sobic003G053500 Sobic010G115600--Sobic003G053500 Sobic007G090472 Sobic007G090472 Sobic010G115600--Sobic007G090472 Sobic010G028100 Sobic010G028100 Sobic010G115600--Sobic010G028100 Sobic002G146000 Sobic002G146000 Sobic010G115600--Sobic002G146000 Sobic007G073000 Sobic007G073000 Sobic010G115600--Sobic007G073000 Sobic001G514700 Sobic001G514700 Sobic010G115600--Sobic001G514700 Sobic001G360500 Sobic001G360500 Sobic010G115600--Sobic001G360500 Sobic003G266300 Sobic003G266300 Sobic010G115600--Sobic003G266300 Sobic009G244300 Sobic009G244300 Sobic006G026600--Sobic009G244300 Sobic002G214300 Sobic002G214300 Sobic006G026600--Sobic002G214300 Sobic003G231800 Sobic003G231800 Sobic006G026600--Sobic003G231800 Sobic006G220800 Sobic006G220800 Sobic006G026600--Sobic006G220800 Sobic007G034300 Sobic007G034300 Sobic006G026600--Sobic007G034300 Sobic006G026600--Sobic009G190500 Sobic004G267000 Sobic004G267000 Sobic006G026600--Sobic004G267000 Sobic005G016500 Sobic005G016500 Sobic006G026600--Sobic005G016500 Sobic009G244600 Sobic009G244600 Sobic006G026600--Sobic009G244600 Sobic003G028300 Sobic003G028300 Sobic004G059600--Sobic003G028300 Sobic004G059600--Sobic004G323900 Sobic004G106300 Sobic004G106300 Sobic004G059600--Sobic004G106300 Sobic003G287450 Sobic003G287450 Sobic004G059600--Sobic003G287450 Sobic004G059600--Sobic010G115600 Sobic001G263900 Sobic001G263900 Sobic004G059600--Sobic001G263900 Sobic006G028400 Sobic006G028400 Sobic004G059600--Sobic006G028400 Sobic003G203600 Sobic003G203600 Sobic004G059600--Sobic003G203600 Sobic007G192000 Sobic007G192000 Sobic004G059600--Sobic007G192000 Sobic004G236300 Sobic004G236300 Sobic007G052700--Sobic004G236300 Sobic001G139001 Sobic001G139001 Sobic007G052700--Sobic001G139001 Sobic006G100600 Sobic006G100600 Sobic007G052700--Sobic006G100600 Sobic007G052700--Sobic006G025900 Sobic009G017800 Sobic009G017800 Sobic007G052700--Sobic009G017800 Sobic001G131400 Sobic001G131400 Sobic007G052700--Sobic001G131400 Sobic007G052700--Sobic001G012500 Sobic001G388600 Sobic001G388600 Sobic007G052700--Sobic001G388600 Sobic007G147800 Sobic007G147800 Sobic007G052700--Sobic007G147800 Sobic009G176800--Sobic004G059600 Sobic003G134600 Sobic003G134600 Sobic009G176800--Sobic003G134600 Sobic005G115600 Sobic005G115600 Sobic009G176800--Sobic005G115600 Sobic009G176800--Sobic004G323900 Sobic009G176800--Sobic004G106300 Sobic006G271500 Sobic006G271500 Sobic009G176800--Sobic006G271500 Sobic004G238100 Sobic004G238100 Sobic009G176800--Sobic004G238100 Sobic009G003000 Sobic009G003000 Sobic009G176800--Sobic009G003000 Sobic001G142800 Sobic001G142800 Sobic009G176800--Sobic001G142800 Sobic001G035600--Sobic001G012400 Sobic001G035600--Sobic002G338400 Sobic004G282700 Sobic004G282700 Sobic001G035600--Sobic004G282700 Sobic006G038200 Sobic006G038200 Sobic001G035600--Sobic006G038200 Sobic001G035600--Sobic001G012500 Sobic001G035600--Sobic002G347300 Sobic009G240700 Sobic009G240700 Sobic001G035600--Sobic009G240700 Sobic003G170300 Sobic003G170300 Sobic001G035600--Sobic003G170300 Sobic003G216500 Sobic003G216500 Sobic001G035600--Sobic003G216500
Octagon: transcription factors


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