Gene annotation
Transcriptome id Sobic.006G026600.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RBR1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g11040.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.006G026600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G244300 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
2 Sobic.002G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G231800 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
4 Sobic.006G220800 -(PubMedID : 26976818)@aminomethyltransferase, putative, expressed K00605: gcvT, aminomethyltransferase
5 Sobic.007G034300 expressed protein -
6 Sobic.009G190500 calreticulin precursor protein, putative, expressed K08057: calreticulin
7 Sobic.004G267000 RAD-like 6(PubMedID : 26465154)@MYB family transcription factor, putative, expressed -
8 Sobic.005G016500 DUF567 domain containing protein, putative, expressed -
9 Sobic.009G244600 MYB family transcription factor, putative, expressed -
10 Sobic.006G201700 wall-associated kinase 1, putative, expressed -
11 Sobic.004G214900 receptor kinase, putative, expressed -
12 Sobic.004G245300 - -
13 Sobic.006G010800 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
14 Sobic.010G249400 expressed protein -
15 Sobic.004G223500 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.006G026000 - -
17 Sobic.007G058200 - -
18 Sobic.001G098600 expressed protein -
19 Sobic.001G344600 late embryogenesis abundant protein, putative, expressed -
20 Sobic.001G076900 Uncharacterised protein family (UPF0497)(PubMedID : 26465154)@membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G026600 Sobic006G026600 Sobic009G244300 Sobic009G244300 Sobic006G026600--Sobic009G244300 Sobic002G214300 Sobic002G214300 Sobic006G026600--Sobic002G214300 Sobic003G231800 Sobic003G231800 Sobic006G026600--Sobic003G231800 Sobic006G220800 Sobic006G220800 Sobic006G026600--Sobic006G220800 Sobic007G034300 Sobic007G034300 Sobic006G026600--Sobic007G034300 Sobic009G190500 Sobic009G190500 Sobic006G026600--Sobic009G190500 Sobic004G267000 Sobic004G267000 Sobic006G026600--Sobic004G267000 Sobic005G016500 Sobic005G016500 Sobic006G026600--Sobic005G016500 Sobic009G244600 Sobic009G244600 Sobic006G026600--Sobic009G244600 Sobic009G244300--Sobic003G231800 Sobic009G244300--Sobic004G267000 Sobic009G244300--Sobic009G244600 Sobic009G244300--Sobic007G034300 Sobic003G241900 Sobic003G241900 Sobic009G244300--Sobic003G241900 Sobic001G520800 Sobic001G520800 Sobic009G244300--Sobic001G520800 Sobic004G305800 Sobic004G305800 Sobic009G244300--Sobic004G305800 Sobic008G104601 Sobic008G104601 Sobic009G244300--Sobic008G104601 Sobic003G199800 Sobic003G199800 Sobic009G244300--Sobic003G199800 Sobic004G353700 Sobic004G353700 Sobic002G214300--Sobic004G353700 Sobic001G406000 Sobic001G406000 Sobic002G214300--Sobic001G406000 Sobic003G234400 Sobic003G234400 Sobic002G214300--Sobic003G234400 Sobic007G189700 Sobic007G189700 Sobic002G214300--Sobic007G189700 Sobic003G237600 Sobic003G237600 Sobic002G214300--Sobic003G237600 Sobic002G214300--Sobic003G231800 Sobic003G036100 Sobic003G036100 Sobic002G214300--Sobic003G036100 Sobic001G189100 Sobic001G189100 Sobic002G214300--Sobic001G189100 Sobic003G231800--Sobic009G244300 Sobic003G231800--Sobic009G244600 Sobic003G231800--Sobic004G267000 Sobic010G183100 Sobic010G183100 Sobic003G231800--Sobic010G183100 Sobic003G231800--Sobic007G034300 Sobic003G231800--Sobic001G520800 Sobic006G006700 Sobic006G006700 Sobic003G231800--Sobic006G006700 Sobic009G254600 Sobic009G254600 Sobic003G231800--Sobic009G254600 Sobic003G235500 Sobic003G235500 Sobic003G231800--Sobic003G235500 Sobic002G120700 Sobic002G120700 Sobic006G220800--Sobic002G120700 Sobic010G023700 Sobic010G023700 Sobic006G220800--Sobic010G023700 Sobic002G051100 Sobic002G051100 Sobic006G220800--Sobic002G051100 Sobic001G344600 Sobic001G344600 Sobic006G220800--Sobic001G344600 Sobic004G035500 Sobic004G035500 Sobic006G220800--Sobic004G035500 Sobic010G241300 Sobic010G241300 Sobic006G220800--Sobic010G241300 Sobic002G030500 Sobic002G030500 Sobic006G220800--Sobic002G030500 Sobic007G213300 Sobic007G213300 Sobic006G220800--Sobic007G213300 Sobic008G066100 Sobic008G066100 Sobic006G220800--Sobic008G066100 Sobic007G034300--Sobic001G520800 Sobic005G165500 Sobic005G165500 Sobic007G034300--Sobic005G165500 Sobic007G034300--Sobic009G244300 Sobic008G053200 Sobic008G053200 Sobic007G034300--Sobic008G053200 Sobic004G283100 Sobic004G283100 Sobic007G034300--Sobic004G283100 Sobic007G034300--Sobic008G104601 Sobic002G233300 Sobic002G233300 Sobic007G034300--Sobic002G233300 Sobic007G034300--Sobic003G231800 Sobic007G034300--Sobic004G305800 Sobic009G190500--Sobic007G213300 Sobic006G010800 Sobic006G010800 Sobic009G190500--Sobic006G010800 Sobic002G301700 Sobic002G301700 Sobic009G190500--Sobic002G301700 Sobic009G190500--Sobic010G241300 Sobic001G006400 Sobic001G006400 Sobic009G190500--Sobic001G006400 Sobic007G059500 Sobic007G059500 Sobic009G190500--Sobic007G059500 Sobic001G240800 Sobic001G240800 Sobic009G190500--Sobic001G240800 Sobic009G190500--Sobic006G220800 Sobic006G201700 Sobic006G201700 Sobic009G190500--Sobic006G201700 Sobic004G267000--Sobic009G244300 Sobic004G267000--Sobic009G244600 Sobic004G267000--Sobic003G231800 Sobic004G267000--Sobic003G241900 Sobic001G076900 Sobic001G076900 Sobic004G267000--Sobic001G076900 Sobic005G056400 Sobic005G056400 Sobic004G267000--Sobic005G056400 Sobic002G116000 Sobic002G116000 Sobic004G267000--Sobic002G116000 Sobic004G267000--Sobic004G305800 Sobic007G004850 Sobic007G004850 Sobic004G267000--Sobic007G004850 Sobic005G016500--Sobic006G006700 Sobic005G016500--Sobic001G344600 Sobic005G016500--Sobic003G231800 Sobic001G098600 Sobic001G098600 Sobic005G016500--Sobic001G098600 Sobic005G016500--Sobic009G244300 Sobic005G016500--Sobic010G183100 Sobic010G038500 Sobic010G038500 Sobic005G016500--Sobic010G038500 Sobic005G016500--Sobic007G034300 Sobic002G421300 Sobic002G421300 Sobic005G016500--Sobic002G421300 Sobic009G244600--Sobic003G231800 Sobic009G244600--Sobic009G244300 Sobic009G244600--Sobic004G267000 Sobic009G244600--Sobic006G006700 Sobic009G244600--Sobic003G241900 Sobic009G244600--Sobic003G237600 Sobic009G244600--Sobic003G199800 Sobic001G068400 Sobic001G068400 Sobic009G244600--Sobic001G068400 Sobic009G244600--Sobic001G189100
Octagon: transcription factors


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