Gene annotation
Transcriptome id Sobic.009G190500.1
Synonym Sb09g024930, CRT3, EBS2, AtCRT3, PSL1
Functional annotation calreticulin precursor protein, putative, expressed
UniProt C5Z0S1
Pfam PF00262
Panther DB PTHR11073 PTHR11073:SF15
NCBI CDD KOG0674; Calreticulin
KEGG Orthology K08057; calreticulin
Gene Ontology GO:0006457; protein folding GO:0005783endoplasmic reticulum GO:0005509calcium ion binding


Orthologs (automatic annotation)
TAIR AT1G08450 : calreticulin 3
RAP-DB (Rice) LOC_Os05g43170.1 : calreticulin precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a044165
Brachypodium KQK05518
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G213300 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
2 Sobic.006G010800 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
3 Sobic.002G301700 amidase, putative, expressed K01426: E3.5.1.4, amidase
4 Sobic.010G241300 -(PubMedID : 26465154)@OsCML29 - Calmodulin-related calcium sensor protein, expressed -
5 Sobic.001G006400 DANA2, putative, expressed -
6 Sobic.007G059500 down-regulated TF in developmental senescence(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
7 Sobic.001G240800 tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.006G220800 -(PubMedID : 26976818)@aminomethyltransferase, putative, expressed K00605: gcvT, aminomethyltransferase
9 Sobic.006G201700 wall-associated kinase 1, putative, expressed -
10 Sobic.003G397200 - -
11 Sobic.010G208400 OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
12 Sobic.002G204600 expressed protein -
13 Sobic.007G194700 phosphoribulokinase/Uridine kinase family protein, expressed K00876: udk, uridine kinase
14 Sobic.005G072200 lipase, putative, expressed -
15 Sobic.006G026600 expressed protein -
16 Sobic.002G301600 amidase, putative, expressed K01426: E3.5.1.4, amidase
17 Sobic.010G019700 cytochrome P450 86A1, putative, expressed -
18 Sobic.009G034600 expressed protein -
19 Sobic.002G193400 lipase, putative, expressed K18875: enhanced disease susceptibility 1 protein
20 Sobic.001G308800 expressed protein K18065: Cdc25 family phosphatase


Gene co-expression network
sample Sobic009G190500 Sobic009G190500 Sobic007G213300 Sobic007G213300 Sobic009G190500--Sobic007G213300 Sobic006G010800 Sobic006G010800 Sobic009G190500--Sobic006G010800 Sobic002G301700 Sobic002G301700 Sobic009G190500--Sobic002G301700 Sobic010G241300 Sobic010G241300 Sobic009G190500--Sobic010G241300 Sobic001G006400 Sobic001G006400 Sobic009G190500--Sobic001G006400 Sobic007G059500 Sobic007G059500 Sobic009G190500--Sobic007G059500 Sobic001G240800 Sobic001G240800 Sobic009G190500--Sobic001G240800 Sobic006G220800 Sobic006G220800 Sobic009G190500--Sobic006G220800 Sobic006G201700 Sobic006G201700 Sobic009G190500--Sobic006G201700 Sobic007G213300--Sobic010G241300 Sobic002G316700 Sobic002G316700 Sobic007G213300--Sobic002G316700 Sobic007G213300--Sobic009G190500 Sobic009G143100 Sobic009G143100 Sobic007G213300--Sobic009G143100 Sobic002G030500 Sobic002G030500 Sobic007G213300--Sobic002G030500 Sobic007G223500 Sobic007G223500 Sobic007G213300--Sobic007G223500 Sobic001G078400 Sobic001G078400 Sobic007G213300--Sobic001G078400 Sobic007G213300--Sobic006G220800 Sobic001G338700 Sobic001G338700 Sobic007G213300--Sobic001G338700 Sobic006G010800--Sobic010G241300 Sobic006G010800--Sobic009G190500 Sobic006G010800--Sobic001G240800 Sobic006G010800--Sobic007G213300 Sobic010G225600 Sobic010G225600 Sobic006G010800--Sobic010G225600 Sobic007G129201 Sobic007G129201 Sobic006G010800--Sobic007G129201 Sobic009G084500 Sobic009G084500 Sobic006G010800--Sobic009G084500 Sobic009G034600 Sobic009G034600 Sobic006G010800--Sobic009G034600 Sobic006G010800--Sobic007G059500 Sobic004G023200 Sobic004G023200 Sobic002G301700--Sobic004G023200 Sobic002G033800 Sobic002G033800 Sobic002G301700--Sobic002G033800 Sobic010G019700 Sobic010G019700 Sobic002G301700--Sobic010G019700 Sobic002G301600 Sobic002G301600 Sobic002G301700--Sobic002G301600 Sobic001G379700 Sobic001G379700 Sobic002G301700--Sobic001G379700 Sobic001G308800 Sobic001G308800 Sobic002G301700--Sobic001G308800 Sobic001G527000 Sobic001G527000 Sobic002G301700--Sobic001G527000 Sobic010G208400 Sobic010G208400 Sobic002G301700--Sobic010G208400 Sobic002G353300 Sobic002G353300 Sobic002G301700--Sobic002G353300 Sobic008G183200 Sobic008G183200 Sobic010G241300--Sobic008G183200 Sobic010G241300--Sobic007G059500 Sobic005G127000 Sobic005G127000 Sobic010G241300--Sobic005G127000 Sobic004G122200 Sobic004G122200 Sobic010G241300--Sobic004G122200 Sobic003G397200 Sobic003G397200 Sobic010G241300--Sobic003G397200 Sobic010G241300--Sobic006G010800 Sobic010G241300--Sobic009G034600 Sobic005G111500 Sobic005G111500 Sobic010G241300--Sobic005G111500 Sobic010G241300--Sobic007G213300 Sobic001G295300 Sobic001G295300 Sobic001G006400--Sobic001G295300 Sobic001G006400--Sobic001G308800 Sobic008G063200 Sobic008G063200 Sobic001G006400--Sobic008G063200 Sobic002G102200 Sobic002G102200 Sobic001G006400--Sobic002G102200 Sobic003G291400 Sobic003G291400 Sobic001G006400--Sobic003G291400 Sobic003G008900 Sobic003G008900 Sobic001G006400--Sobic003G008900 Sobic001G447700 Sobic001G447700 Sobic001G006400--Sobic001G447700 Sobic003G439100 Sobic003G439100 Sobic001G006400--Sobic003G439100 Sobic008G186400 Sobic008G186400 Sobic001G006400--Sobic008G186400 Sobic007G059500--Sobic005G127000 Sobic007G059500--Sobic010G241300 Sobic007G059500--Sobic008G183200 Sobic001G498300 Sobic001G498300 Sobic007G059500--Sobic001G498300 Sobic001G377500 Sobic001G377500 Sobic007G059500--Sobic001G377500 Sobic010G218600 Sobic010G218600 Sobic007G059500--Sobic010G218600 Sobic008G063100 Sobic008G063100 Sobic007G059500--Sobic008G063100 Sobic002G281000 Sobic002G281000 Sobic007G059500--Sobic002G281000 Sobic005G021600 Sobic005G021600 Sobic007G059500--Sobic005G021600 Sobic004G096100 Sobic004G096100 Sobic001G240800--Sobic004G096100 Sobic001G240800--Sobic010G241300 Sobic005G072200 Sobic005G072200 Sobic001G240800--Sobic005G072200 Sobic001G291200 Sobic001G291200 Sobic001G240800--Sobic001G291200 Sobic004G227300 Sobic004G227300 Sobic001G240800--Sobic004G227300 Sobic004G088100 Sobic004G088100 Sobic001G240800--Sobic004G088100 Sobic007G179750 Sobic007G179750 Sobic001G240800--Sobic007G179750 Sobic006G102400 Sobic006G102400 Sobic001G240800--Sobic006G102400 Sobic003G264901 Sobic003G264901 Sobic001G240800--Sobic003G264901 Sobic002G120700 Sobic002G120700 Sobic006G220800--Sobic002G120700 Sobic010G023700 Sobic010G023700 Sobic006G220800--Sobic010G023700 Sobic002G051100 Sobic002G051100 Sobic006G220800--Sobic002G051100 Sobic001G344600 Sobic001G344600 Sobic006G220800--Sobic001G344600 Sobic004G035500 Sobic004G035500 Sobic006G220800--Sobic004G035500 Sobic006G220800--Sobic010G241300 Sobic006G220800--Sobic002G030500 Sobic006G220800--Sobic007G213300 Sobic008G066100 Sobic008G066100 Sobic006G220800--Sobic008G066100 Sobic008G099600 Sobic008G099600 Sobic006G201700--Sobic008G099600 Sobic010G015800 Sobic010G015800 Sobic006G201700--Sobic010G015800 Sobic006G021900 Sobic006G021900 Sobic006G201700--Sobic006G021900 Sobic007G089900 Sobic007G089900 Sobic006G201700--Sobic007G089900 Sobic010G122200 Sobic010G122200 Sobic006G201700--Sobic010G122200 Sobic005G154100 Sobic005G154100 Sobic006G201700--Sobic005G154100 Sobic006G201700--Sobic009G190500 Sobic002G067300 Sobic002G067300 Sobic006G201700--Sobic002G067300 Sobic004G323900 Sobic004G323900 Sobic006G201700--Sobic004G323900
Octagon: transcription factors


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