Gene annotation
Transcriptome id Sobic.007G194700.2,Sobic.007G194700.1
Synonym UKL2, Sb07g026320
Functional annotation phosphoribulokinase/Uridine kinase family protein, expressed
UniProt C5YI31 , A0A1Z5RAP9
Pfam PF14681 PF13238 PF14681 PF00485
Panther DB PTHR10285:SF82 PTHR10285
NCBI CDD KOG4203; Armadillo/beta-Catenin/plakoglobin
KEGG Orthology K00876; udk, uridine kinase
Gene Ontology GO:0005524; ATP binding GO:0008152metabolic process GO:0016301kinase activity


Orthologs (automatic annotation)
TAIR AT3G27190 : uridine kinase-like 2
RAP-DB (Rice) LOC_Os08g41790.1,LOC_Os09g32820.1 : phosphoribulokinase/Uridine kinase family protein, expressed,uridine/cytidine kinase-like 1, putative, expressed
MaizeGDB (Corn) Zm00025a014299 , Zm00025a005251
Brachypodium KQJ90919 , KQJ99105
Barley HORVU5Hr1G076150.4 , HORVU5Hr1G076150.5 , HORVU5Hr1G076150.6 , HORVU5Hr1G076150.7 , HORVU5Hr1G076150.2 , HORVU5Hr1G076150.3 , HORVU5Hr1G076150.9 , HORVU4Hr1G025660.9 , HORVU4Hr1G025660.8 , HORVU4Hr1G025660.3 , HORVU4Hr1G025660.2 , HORVU4Hr1G025660.7 , HORVU4Hr1G025660.6 , HORVU4Hr1G025660.5 , HORVU4Hr1G025660.4 , HORVU5Hr1G076150.16 , HORVU5Hr1G076150.14 , HORVU5Hr1G076150.15 , HORVU5Hr1G076150.12 , HORVU5Hr1G076150.13 , HORVU5Hr1G076150.10 , HORVU5Hr1G076150.11 , HORVU4Hr1G025660.20 , HORVU4Hr1G025660.21 , HORVU4Hr1G025660.18 , HORVU4Hr1G025660.17 , HORVU4Hr1G025660.16 , HORVU7Hr1G053940.8 , HORVU7Hr1G053940.9 , HORVU7Hr1G053940.1 , HORVU7Hr1G053940.2 , HORVU7Hr1G053940.4 , HORVU7Hr1G053940.5 , HORVU7Hr1G053940.6 , HORVU7Hr1G053940.7 , HORVU7Hr1G053940.12 , HORVU7Hr1G053940.13 , HORVU7Hr1G053940.10 , HORVU7Hr1G053940.11 , HORVU7Hr1G053940.16 , HORVU7Hr1G053940.17 , HORVU7Hr1G053940.14 , HORVU7Hr1G053940.15 , HORVU7Hr1G053940.18 , HORVU7Hr1G053940.19 , HORVU4Hr1G025660.19 , HORVU4Hr1G025660.13 , HORVU4Hr1G025660.12 , HORVU4Hr1G025660.11 , HORVU4Hr1G025660.10 , HORVU4Hr1G025660.15 , HORVU4Hr1G025660.14
Wheat TraesCS7D02G260200 , TraesCS7D02G260200 , TraesCS7D02G260200 , TraesCS5B02G284500 , TraesCS5D02G292700 , TraesCS5D02G292700 , TraesCS7A02G259200 , TraesCS7A02G259200 , TraesCS7A02G259200 , TraesCS7A02G259200 , TraesCS7B02G157000 , TraesCS5A02G285300 , TraesCS7B02G157000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G146800 potassium channel AKT2/3, putative, expressed -
2 Sobic.004G236300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@shikimate kinase, putative, expressed K00891: aroK, shikimate kinase
3 Sobic.004G272300 expressed protein -
4 Sobic.003G075000 expressed protein -
5 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
6 Sobic.006G100600 histone H3, putative, expressed K11253: histone H3
7 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
8 Sobic.001G087900 expressed protein -
9 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
10 Sobic.009G217900 expressed protein K06875: PDCD5, programmed cell death protein 5
11 Sobic.003G440800 vacuolar protein sorting 55 family protein, putative, expressed -
12 Sobic.001G169700 ZOS3-14 - C2H2 zinc finger protein, expressed -
13 Sobic.001G193200 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
14 Sobic.002G226300 OsCML10 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
15 Sobic.008G188700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
16 Sobic.002G033400 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
17 Sobic.001G048200 elongation factor P, putative, expressed -
18 Sobic.009G190500 calreticulin precursor protein, putative, expressed K08057: calreticulin
19 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
20 Sobic.006G232200 SNARE domain containing protein, putative, expressed K08501: syntaxin 8
K08503: syntaxin of plants SYP5


Gene co-expression network
sample Sobic007G194700 Sobic007G194700 Sobic009G146800 Sobic009G146800 Sobic007G194700--Sobic009G146800 Sobic004G236300 Sobic004G236300 Sobic007G194700--Sobic004G236300 Sobic004G272300 Sobic004G272300 Sobic007G194700--Sobic004G272300 Sobic003G075000 Sobic003G075000 Sobic007G194700--Sobic003G075000 Sobic009G198500 Sobic009G198500 Sobic007G194700--Sobic009G198500 Sobic006G100600 Sobic006G100600 Sobic007G194700--Sobic006G100600 Sobic001G314500 Sobic001G314500 Sobic007G194700--Sobic001G314500 Sobic001G087900 Sobic001G087900 Sobic007G194700--Sobic001G087900 Sobic004G130100 Sobic004G130100 Sobic007G194700--Sobic004G130100 Sobic009G147000 Sobic009G147000 Sobic009G146800--Sobic009G147000 Sobic009G146800--Sobic007G194700 Sobic006G102400 Sobic006G102400 Sobic009G146800--Sobic006G102400 Sobic002G204600 Sobic002G204600 Sobic009G146800--Sobic002G204600 Sobic005G026100 Sobic005G026100 Sobic009G146800--Sobic005G026100 Sobic001G266400 Sobic001G266400 Sobic009G146800--Sobic001G266400 Sobic010G133200 Sobic010G133200 Sobic009G146800--Sobic010G133200 Sobic004G136600 Sobic004G136600 Sobic009G146800--Sobic004G136600 Sobic004G320800 Sobic004G320800 Sobic009G146800--Sobic004G320800 Sobic004G236300--Sobic006G100600 Sobic004G236300--Sobic004G130100 Sobic002G255200 Sobic002G255200 Sobic004G236300--Sobic002G255200 Sobic002G355300 Sobic002G355300 Sobic004G236300--Sobic002G355300 Sobic003G337000 Sobic003G337000 Sobic004G236300--Sobic003G337000 Sobic006G232200 Sobic006G232200 Sobic004G236300--Sobic006G232200 Sobic004G055200 Sobic004G055200 Sobic004G236300--Sobic004G055200 Sobic004G236300--Sobic004G136600 Sobic001G388600 Sobic001G388600 Sobic004G236300--Sobic001G388600 Sobic004G272300--Sobic009G198500 Sobic004G300900 Sobic004G300900 Sobic004G272300--Sobic004G300900 Sobic001G005900 Sobic001G005900 Sobic004G272300--Sobic001G005900 Sobic007G168600 Sobic007G168600 Sobic004G272300--Sobic007G168600 Sobic002G078400 Sobic002G078400 Sobic004G272300--Sobic002G078400 Sobic003G124800 Sobic003G124800 Sobic004G272300--Sobic003G124800 Sobic004G351500 Sobic004G351500 Sobic004G272300--Sobic004G351500 Sobic002G400000 Sobic002G400000 Sobic004G272300--Sobic002G400000 Sobic004G272300--Sobic001G314500 Sobic001G024500 Sobic001G024500 Sobic003G075000--Sobic001G024500 Sobic001G131400 Sobic001G131400 Sobic003G075000--Sobic001G131400 Sobic003G075000--Sobic006G100600 Sobic003G075000--Sobic007G194700 Sobic002G345850 Sobic002G345850 Sobic003G075000--Sobic002G345850 Sobic005G107300 Sobic005G107300 Sobic003G075000--Sobic005G107300 Sobic003G075000--Sobic001G087900 Sobic001G072800 Sobic001G072800 Sobic003G075000--Sobic001G072800 Sobic002G066400 Sobic002G066400 Sobic003G075000--Sobic002G066400 Sobic009G198500--Sobic004G272300 Sobic009G198500--Sobic003G124800 Sobic009G198500--Sobic002G400000 Sobic009G198500--Sobic007G168600 Sobic009G198500--Sobic002G078400 Sobic009G198500--Sobic004G300900 Sobic009G198500--Sobic001G005900 Sobic007G096700 Sobic007G096700 Sobic009G198500--Sobic007G096700 Sobic006G212100 Sobic006G212100 Sobic009G198500--Sobic006G212100 Sobic008G073300 Sobic008G073300 Sobic006G100600--Sobic008G073300 Sobic006G100600--Sobic004G236300 Sobic006G100600--Sobic004G130100 Sobic002G371100 Sobic002G371100 Sobic006G100600--Sobic002G371100 Sobic003G440800 Sobic003G440800 Sobic006G100600--Sobic003G440800 Sobic006G100600--Sobic002G255200 Sobic001G128400 Sobic001G128400 Sobic006G100600--Sobic001G128400 Sobic003G386100 Sobic003G386100 Sobic006G100600--Sobic003G386100 Sobic006G100600--Sobic006G232200 Sobic001G314500--Sobic006G212100 Sobic001G314500--Sobic009G198500 Sobic001G314500--Sobic007G168600 Sobic001G388200 Sobic001G388200 Sobic001G314500--Sobic001G388200 Sobic001G314500--Sobic006G232200 Sobic001G054200 Sobic001G054200 Sobic001G314500--Sobic001G054200 Sobic009G004600 Sobic009G004600 Sobic001G314500--Sobic009G004600 Sobic010G205300 Sobic010G205300 Sobic001G314500--Sobic010G205300 Sobic003G217400 Sobic003G217400 Sobic001G314500--Sobic003G217400 Sobic001G087900--Sobic004G351500 Sobic001G428200 Sobic001G428200 Sobic001G087900--Sobic001G428200 Sobic001G353600 Sobic001G353600 Sobic001G087900--Sobic001G353600 Sobic009G131100 Sobic009G131100 Sobic001G087900--Sobic009G131100 Sobic001G087900--Sobic009G198500 Sobic001G087900--Sobic004G272300 Sobic004G026400 Sobic004G026400 Sobic001G087900--Sobic004G026400 Sobic001G095632 Sobic001G095632 Sobic001G087900--Sobic001G095632 Sobic001G034700 Sobic001G034700 Sobic001G087900--Sobic001G034700 Sobic009G217900 Sobic009G217900 Sobic004G130100--Sobic009G217900 Sobic004G130100--Sobic006G232200 Sobic001G501200 Sobic001G501200 Sobic004G130100--Sobic001G501200 Sobic004G130100--Sobic003G337000 Sobic002G363100 Sobic002G363100 Sobic004G130100--Sobic002G363100 Sobic004G130100--Sobic003G124800 Sobic004G130100--Sobic009G198500 Sobic002G428200 Sobic002G428200 Sobic004G130100--Sobic002G428200 Sobic001G428100 Sobic001G428100 Sobic004G130100--Sobic001G428100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.