Gene annotation
Transcriptome id Sobic.007G058200.1
Synonym
Functional annotation -
UniProt A0A1B6PFT8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G297400 histone H3, putative, expressed K11253: histone H3
2 Sobic.001G098600 expressed protein -
3 Sobic.003G237600 expressed protein -
4 Sobic.005G037300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter, major facilitator family, putative, expressed -
5 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.004G035700 - -
7 Sobic.001G068400 - -
8 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
9 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
10 Sobic.001G355600 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
12 Sobic.010G183032 - -
13 Sobic.010G108401 - -
14 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.003G428800 "basic helix-loop-helix (bHLH) transcription factor, downregulates lignin synthesis in Arabidopisis"(PubMedID : 23698629)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Closest homologue of rice OsIRO2.(PubMedID : 16887895)@helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.002G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
18 Sobic.001G301600 expansin precursor, putative, expressed -
19 Sobic.007G189700 - -
20 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -


Gene co-expression network
sample Sobic007G058200 Sobic007G058200 Sobic001G297400 Sobic001G297400 Sobic007G058200--Sobic001G297400 Sobic001G098600 Sobic001G098600 Sobic007G058200--Sobic001G098600 Sobic003G237600 Sobic003G237600 Sobic007G058200--Sobic003G237600 Sobic005G037300 Sobic005G037300 Sobic007G058200--Sobic005G037300 Sobic009G254600 Sobic009G254600 Sobic007G058200--Sobic009G254600 Sobic004G035700 Sobic004G035700 Sobic007G058200--Sobic004G035700 Sobic001G068400 Sobic001G068400 Sobic007G058200--Sobic001G068400 Sobic001G189100 Sobic001G189100 Sobic007G058200--Sobic001G189100 Sobic010G183032 Sobic010G183032 Sobic001G297400--Sobic010G183032 Sobic010G108401 Sobic010G108401 Sobic001G297400--Sobic010G108401 Sobic001G297400--Sobic004G035700 Sobic010G183100 Sobic010G183100 Sobic001G297400--Sobic010G183100 Sobic001G297400--Sobic001G068400 Sobic002G040100 Sobic002G040100 Sobic001G297400--Sobic002G040100 Sobic002G213000 Sobic002G213000 Sobic001G297400--Sobic002G213000 Sobic010G038500 Sobic010G038500 Sobic001G297400--Sobic010G038500 Sobic001G297400--Sobic009G254600 Sobic001G098600--Sobic010G038500 Sobic001G098600--Sobic004G035700 Sobic001G344600 Sobic001G344600 Sobic001G098600--Sobic001G344600 Sobic005G065500 Sobic005G065500 Sobic001G098600--Sobic005G065500 Sobic005G217900 Sobic005G217900 Sobic001G098600--Sobic005G217900 Sobic001G098600--Sobic001G068400 Sobic001G098600--Sobic009G254600 Sobic001G098600--Sobic010G183100 Sobic001G361700 Sobic001G361700 Sobic001G098600--Sobic001G361700 Sobic003G237600--Sobic001G189100 Sobic001G355600 Sobic001G355600 Sobic003G237600--Sobic001G355600 Sobic003G036100 Sobic003G036100 Sobic003G237600--Sobic003G036100 Sobic003G237600--Sobic009G254600 Sobic009G222200 Sobic009G222200 Sobic003G237600--Sobic009G222200 Sobic003G237600--Sobic010G183100 Sobic003G237600--Sobic004G035700 Sobic008G106200 Sobic008G106200 Sobic003G237600--Sobic008G106200 Sobic005G037300--Sobic001G355600 Sobic005G037300--Sobic003G237600 Sobic005G037300--Sobic007G058200 Sobic005G037300--Sobic001G189100 Sobic005G037300--Sobic008G106200 Sobic003G428800 Sobic003G428800 Sobic005G037300--Sobic003G428800 Sobic005G037300--Sobic009G222200 Sobic005G037300--Sobic001G098600 Sobic009G254600--Sobic010G038500 Sobic008G081200 Sobic008G081200 Sobic009G254600--Sobic008G081200 Sobic009G254600--Sobic001G189100 Sobic009G254600--Sobic004G035700 Sobic009G254600--Sobic003G237600 Sobic009G254600--Sobic010G183100 Sobic009G254600--Sobic001G068400 Sobic007G189700 Sobic007G189700 Sobic009G254600--Sobic007G189700 Sobic004G035700--Sobic010G183100 Sobic004G035700--Sobic007G189700 Sobic004G035700--Sobic001G068400 Sobic004G035700--Sobic010G183032 Sobic004G035700--Sobic010G108401 Sobic004G035700--Sobic009G254600 Sobic004G035700--Sobic010G038500 Sobic004G035700--Sobic002G040100 Sobic004G035700--Sobic001G297400 Sobic001G068400--Sobic002G040100 Sobic001G068400--Sobic010G038500 Sobic001G068400--Sobic010G183100 Sobic001G068400--Sobic004G035700 Sobic001G068400--Sobic008G081200 Sobic010G276400 Sobic010G276400 Sobic001G068400--Sobic010G276400 Sobic002G000500 Sobic002G000500 Sobic001G068400--Sobic002G000500 Sobic003G199800 Sobic003G199800 Sobic001G068400--Sobic003G199800 Sobic001G068400--Sobic010G183032 Sobic001G189100--Sobic001G189100 Sobic001G189100--Sobic003G237600 Sobic001G189100--Sobic009G254600 Sobic001G189100--Sobic003G036100 Sobic001G189100--Sobic001G355600 Sobic001G189100--Sobic010G183100 Sobic001G189100--Sobic009G222200 Sobic001G189100--Sobic004G035700 Sobic001G189100--Sobic008G106200
Octagon: transcription factors


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