Gene annotation
Transcriptome id Sobic.005G037300.1
Synonym Sb05g003130
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transporter, major facilitator family, putative, expressed
UniProt A0A1B6PQ09
Pfam PF07690
Panther DB PTHR23504 PTHR23504:SF35
NCBI CDD KOG2816; Predicted transporter ADD1 (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G16980 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os11g05390.1 : transporter, major facilitator family, putative, expressed
MaizeGDB (Corn) Zm00025a033485 , Zm00025a014476
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G037300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G355600 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.003G237600 expressed protein -
3 Sobic.007G058200 - -
4 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
5 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
6 Sobic.008G106200 cytochrome P450, putative, expressed -
7 Sobic.003G428800 "basic helix-loop-helix (bHLH) transcription factor, downregulates lignin synthesis in Arabidopisis"(PubMedID : 23698629)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Closest homologue of rice OsIRO2.(PubMedID : 16887895)@helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
9 Sobic.001G098600 expressed protein -
10 Sobic.002G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.010G102050 - -
12 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.001G123700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G036100 - -
15 Sobic.002G195100 - -
16 Sobic.004G095000 zinc knuckle family protein, expressed K03257: translation initiation factor 4A
17 Sobic.004G035700 - -
18 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
19 Sobic.007G189700 - -
20 Sobic.003G326400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic005G037300 Sobic005G037300 Sobic001G355600 Sobic001G355600 Sobic005G037300--Sobic001G355600 Sobic003G237600 Sobic003G237600 Sobic005G037300--Sobic003G237600 Sobic007G058200 Sobic007G058200 Sobic005G037300--Sobic007G058200 Sobic001G189100 Sobic001G189100 Sobic005G037300--Sobic001G189100 Sobic008G106200 Sobic008G106200 Sobic005G037300--Sobic008G106200 Sobic003G428800 Sobic003G428800 Sobic005G037300--Sobic003G428800 Sobic009G222200 Sobic009G222200 Sobic005G037300--Sobic009G222200 Sobic001G098600 Sobic001G098600 Sobic005G037300--Sobic001G098600 Sobic001G355600--Sobic001G189100 Sobic001G355600--Sobic003G237600 Sobic001G355600--Sobic009G222200 Sobic003G371100 Sobic003G371100 Sobic001G355600--Sobic003G371100 Sobic003G036100 Sobic003G036100 Sobic001G355600--Sobic003G036100 Sobic010G183100 Sobic010G183100 Sobic001G355600--Sobic010G183100 Sobic001G355600--Sobic008G106200 Sobic009G254600 Sobic009G254600 Sobic001G355600--Sobic009G254600 Sobic003G237600--Sobic001G189100 Sobic003G237600--Sobic001G355600 Sobic003G237600--Sobic003G036100 Sobic003G237600--Sobic009G254600 Sobic003G237600--Sobic009G222200 Sobic003G237600--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic003G237600--Sobic004G035700 Sobic003G237600--Sobic008G106200 Sobic001G297400 Sobic001G297400 Sobic007G058200--Sobic001G297400 Sobic007G058200--Sobic001G098600 Sobic007G058200--Sobic003G237600 Sobic007G058200--Sobic005G037300 Sobic007G058200--Sobic009G254600 Sobic007G058200--Sobic004G035700 Sobic001G068400 Sobic001G068400 Sobic007G058200--Sobic001G068400 Sobic007G058200--Sobic001G189100 Sobic001G189100--Sobic001G189100 Sobic001G189100--Sobic003G237600 Sobic001G189100--Sobic009G254600 Sobic001G189100--Sobic003G036100 Sobic001G189100--Sobic001G355600 Sobic001G189100--Sobic010G183100 Sobic001G189100--Sobic009G222200 Sobic001G189100--Sobic004G035700 Sobic001G189100--Sobic008G106200 Sobic008G106200--Sobic001G189100 Sobic008G106200--Sobic003G237600 Sobic008G106200--Sobic009G254600 Sobic008G106200--Sobic001G355600 Sobic008G106200--Sobic003G036100 Sobic008G106200--Sobic004G035700 Sobic008G106200--Sobic010G183100 Sobic008G106200--Sobic001G068400 Sobic005G069000 Sobic005G069000 Sobic003G428800--Sobic005G069000 Sobic007G057300 Sobic007G057300 Sobic003G428800--Sobic007G057300 Sobic008G008801 Sobic008G008801 Sobic003G428800--Sobic008G008801 Sobic004G121900 Sobic004G121900 Sobic003G428800--Sobic004G121900 Sobic002G030650 Sobic002G030650 Sobic003G428800--Sobic002G030650 Sobic008G099600 Sobic008G099600 Sobic003G428800--Sobic008G099600 Sobic001G278500 Sobic001G278500 Sobic003G428800--Sobic001G278500 Sobic007G015100 Sobic007G015100 Sobic003G428800--Sobic007G015100 Sobic002G381200 Sobic002G381200 Sobic003G428800--Sobic002G381200 Sobic009G222200--Sobic010G183100 Sobic009G222200--Sobic003G237600 Sobic009G222200--Sobic001G189100 Sobic010G030800 Sobic010G030800 Sobic009G222200--Sobic010G030800 Sobic009G222200--Sobic001G355600 Sobic007G189700 Sobic007G189700 Sobic009G222200--Sobic007G189700 Sobic009G222200--Sobic003G036100 Sobic009G222200--Sobic004G035700 Sobic010G038500 Sobic010G038500 Sobic001G098600--Sobic010G038500 Sobic001G098600--Sobic004G035700 Sobic001G344600 Sobic001G344600 Sobic001G098600--Sobic001G344600 Sobic005G065500 Sobic005G065500 Sobic001G098600--Sobic005G065500 Sobic005G217900 Sobic005G217900 Sobic001G098600--Sobic005G217900 Sobic001G098600--Sobic001G068400 Sobic001G098600--Sobic009G254600 Sobic001G098600--Sobic010G183100 Sobic001G361700 Sobic001G361700 Sobic001G098600--Sobic001G361700
Octagon: transcription factors


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