Gene annotation
Transcriptome id Sobic.001G355600.1,Sobic.001G355600.2
Synonym PYE
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1B6QMX4 , A0A1Z5S9A6
Pfam -
Panther DB PTHR23042 PTHR23042:SF62
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47640 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os03g26210.3,LOC_Os03g26210.2 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002670
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G355600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
2 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
3 Sobic.003G237600 expressed protein -
4 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
5 Sobic.003G371100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@POT family protein, expressed -
6 Sobic.003G036100 - -
7 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
8 Sobic.008G106200 cytochrome P450, putative, expressed -
9 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.003G326400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.004G035700 - -
12 Sobic.007G189700 - -
13 Sobic.002G213000 - -
14 Sobic.004G353700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G095000 zinc knuckle family protein, expressed K03257: translation initiation factor 4A
16 Sobic.005G037300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter, major facilitator family, putative, expressed -
17 Sobic.010G030800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
18 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
19 Sobic.001G068400 - -
20 Sobic.006G006700 - -


Gene co-expression network
sample Sobic001G355600 Sobic001G355600 Sobic001G189100 Sobic001G189100 Sobic001G355600--Sobic001G189100 Sobic003G237600 Sobic003G237600 Sobic001G355600--Sobic003G237600 Sobic009G222200 Sobic009G222200 Sobic001G355600--Sobic009G222200 Sobic003G371100 Sobic003G371100 Sobic001G355600--Sobic003G371100 Sobic003G036100 Sobic003G036100 Sobic001G355600--Sobic003G036100 Sobic010G183100 Sobic010G183100 Sobic001G355600--Sobic010G183100 Sobic008G106200 Sobic008G106200 Sobic001G355600--Sobic008G106200 Sobic009G254600 Sobic009G254600 Sobic001G355600--Sobic009G254600 Sobic001G189100--Sobic001G189100 Sobic001G189100--Sobic003G237600 Sobic001G189100--Sobic009G254600 Sobic001G189100--Sobic003G036100 Sobic001G189100--Sobic001G355600 Sobic001G189100--Sobic010G183100 Sobic001G189100--Sobic009G222200 Sobic004G035700 Sobic004G035700 Sobic001G189100--Sobic004G035700 Sobic001G189100--Sobic008G106200 Sobic003G237600--Sobic001G189100 Sobic003G237600--Sobic001G355600 Sobic003G237600--Sobic003G036100 Sobic003G237600--Sobic009G254600 Sobic003G237600--Sobic009G222200 Sobic003G237600--Sobic010G183100 Sobic003G237600--Sobic004G035700 Sobic003G237600--Sobic008G106200 Sobic009G222200--Sobic010G183100 Sobic009G222200--Sobic003G237600 Sobic009G222200--Sobic001G189100 Sobic010G030800 Sobic010G030800 Sobic009G222200--Sobic010G030800 Sobic009G222200--Sobic001G355600 Sobic007G189700 Sobic007G189700 Sobic009G222200--Sobic007G189700 Sobic009G222200--Sobic003G036100 Sobic009G222200--Sobic004G035700 Sobic003G371100--Sobic001G355600 Sobic007G226200 Sobic007G226200 Sobic003G371100--Sobic007G226200 Sobic002G213000 Sobic002G213000 Sobic003G371100--Sobic002G213000 Sobic003G371100--Sobic001G189100 Sobic003G371100--Sobic003G237600 Sobic003G326400 Sobic003G326400 Sobic003G371100--Sobic003G326400 Sobic003G371100--Sobic009G222200 Sobic003G344700 Sobic003G344700 Sobic003G371100--Sobic003G344700 Sobic003G036100--Sobic001G189100 Sobic003G036100--Sobic003G237600 Sobic004G353700 Sobic004G353700 Sobic003G036100--Sobic004G353700 Sobic003G036100--Sobic007G189700 Sobic003G036100--Sobic010G030800 Sobic003G036100--Sobic009G222200 Sobic003G036100--Sobic009G254600 Sobic001G111700 Sobic001G111700 Sobic003G036100--Sobic001G111700 Sobic010G183100--Sobic004G035700 Sobic010G183100--Sobic007G189700 Sobic008G081200 Sobic008G081200 Sobic010G183100--Sobic008G081200 Sobic001G068400 Sobic001G068400 Sobic010G183100--Sobic001G068400 Sobic003G199800 Sobic003G199800 Sobic010G183100--Sobic003G199800 Sobic010G038500 Sobic010G038500 Sobic010G183100--Sobic010G038500 Sobic002G040100 Sobic002G040100 Sobic010G183100--Sobic002G040100 Sobic010G183100--Sobic009G254600 Sobic010G183100--Sobic009G222200 Sobic008G106200--Sobic001G189100 Sobic008G106200--Sobic003G237600 Sobic008G106200--Sobic009G254600 Sobic008G106200--Sobic001G355600 Sobic008G106200--Sobic003G036100 Sobic008G106200--Sobic004G035700 Sobic008G106200--Sobic010G183100 Sobic008G106200--Sobic001G068400 Sobic009G254600--Sobic010G038500 Sobic009G254600--Sobic008G081200 Sobic009G254600--Sobic001G189100 Sobic009G254600--Sobic004G035700 Sobic009G254600--Sobic003G237600 Sobic009G254600--Sobic010G183100 Sobic009G254600--Sobic001G068400 Sobic009G254600--Sobic007G189700
Octagon: transcription factors


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