Gene annotation
Transcriptome id Sobic.001G123700.1
Synonym Sb01g010880
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WNT3
Pfam -
Panther DB PTHR36323
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g49560.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G195100 - -
2 Sobic.002G195200 - -
3 Sobic.008G099600 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
4 Sobic.004G245300 - -
5 Sobic.005G037300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter, major facilitator family, putative, expressed -
6 Sobic.007G058200 - -
7 Sobic.001G098600 expressed protein -
8 Sobic.002G195300 - -
9 Sobic.002G023000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK83 - OsWAK pseudogene, expressed -
10 Sobic.001G339300 expressed protein -
11 Sobic.005G065500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease 1 precursor, putative, expressed -
12 Sobic.004G223500 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
13 Sobic.008G191300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase 3, putative, expressed -
14 Sobic.010G102050 - -
15 Sobic.003G237600 expressed protein -
16 Sobic.006G006700 - -
17 Sobic.005G175800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@EF hand family protein, putative K02183: calmodulin
18 Sobic.001G278500 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.007G214300 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.001G355600 helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic001G123700 Sobic001G123700 Sobic002G195100 Sobic002G195100 Sobic001G123700--Sobic002G195100 Sobic002G195200 Sobic002G195200 Sobic001G123700--Sobic002G195200 Sobic008G099600 Sobic008G099600 Sobic001G123700--Sobic008G099600 Sobic004G245300 Sobic004G245300 Sobic001G123700--Sobic004G245300 Sobic005G037300 Sobic005G037300 Sobic001G123700--Sobic005G037300 Sobic007G058200 Sobic007G058200 Sobic001G123700--Sobic007G058200 Sobic001G098600 Sobic001G098600 Sobic001G123700--Sobic001G098600 Sobic002G195300 Sobic002G195300 Sobic001G123700--Sobic002G195300 Sobic002G023000 Sobic002G023000 Sobic001G123700--Sobic002G023000 Sobic006G006700 Sobic006G006700 Sobic002G195100--Sobic006G006700 Sobic002G195100--Sobic002G195200 Sobic002G195100--Sobic004G245300 Sobic005G065500 Sobic005G065500 Sobic002G195100--Sobic005G065500 Sobic002G195100--Sobic002G023000 Sobic003G237600 Sobic003G237600 Sobic002G195100--Sobic003G237600 Sobic001G189100 Sobic001G189100 Sobic002G195100--Sobic001G189100 Sobic007G214300 Sobic007G214300 Sobic002G195100--Sobic007G214300 Sobic002G195200--Sobic002G195100 Sobic002G195200--Sobic004G245300 Sobic002G195200--Sobic007G214300 Sobic002G195200--Sobic002G195300 Sobic007G058800 Sobic007G058800 Sobic002G195200--Sobic007G058800 Sobic002G195200--Sobic002G023000 Sobic002G195200--Sobic005G065500 Sobic004G094600 Sobic004G094600 Sobic002G195200--Sobic004G094600 Sobic007G215700 Sobic007G215700 Sobic002G195200--Sobic007G215700 Sobic001G278500 Sobic001G278500 Sobic008G099600--Sobic001G278500 Sobic005G069000 Sobic005G069000 Sobic008G099600--Sobic005G069000 Sobic001G327900 Sobic001G327900 Sobic008G099600--Sobic001G327900 Sobic008G099232 Sobic008G099232 Sobic008G099600--Sobic008G099232 Sobic006G201700 Sobic006G201700 Sobic008G099600--Sobic006G201700 Sobic008G099300 Sobic008G099300 Sobic008G099600--Sobic008G099300 Sobic003G428800 Sobic003G428800 Sobic008G099600--Sobic003G428800 Sobic009G225800 Sobic009G225800 Sobic008G099600--Sobic009G225800 Sobic008G079800 Sobic008G079800 Sobic008G099600--Sobic008G079800 Sobic004G245300--Sobic005G065500 Sobic009G254600 Sobic009G254600 Sobic004G245300--Sobic009G254600 Sobic004G245300--Sobic002G195200 Sobic004G245300--Sobic002G195100 Sobic004G223500 Sobic004G223500 Sobic004G245300--Sobic004G223500 Sobic004G018900 Sobic004G018900 Sobic004G245300--Sobic004G018900 Sobic004G245300--Sobic007G214300 Sobic004G245300--Sobic002G195300 Sobic010G038500 Sobic010G038500 Sobic004G245300--Sobic010G038500 Sobic001G355600 Sobic001G355600 Sobic005G037300--Sobic001G355600 Sobic005G037300--Sobic003G237600 Sobic005G037300--Sobic007G058200 Sobic005G037300--Sobic001G189100 Sobic008G106200 Sobic008G106200 Sobic005G037300--Sobic008G106200 Sobic005G037300--Sobic003G428800 Sobic009G222200 Sobic009G222200 Sobic005G037300--Sobic009G222200 Sobic005G037300--Sobic001G098600 Sobic001G297400 Sobic001G297400 Sobic007G058200--Sobic001G297400 Sobic007G058200--Sobic001G098600 Sobic007G058200--Sobic003G237600 Sobic007G058200--Sobic005G037300 Sobic007G058200--Sobic009G254600 Sobic004G035700 Sobic004G035700 Sobic007G058200--Sobic004G035700 Sobic001G068400 Sobic001G068400 Sobic007G058200--Sobic001G068400 Sobic007G058200--Sobic001G189100 Sobic001G098600--Sobic010G038500 Sobic001G098600--Sobic004G035700 Sobic001G344600 Sobic001G344600 Sobic001G098600--Sobic001G344600 Sobic001G098600--Sobic005G065500 Sobic005G217900 Sobic005G217900 Sobic001G098600--Sobic005G217900 Sobic001G098600--Sobic001G068400 Sobic001G098600--Sobic009G254600 Sobic010G183100 Sobic010G183100 Sobic001G098600--Sobic010G183100 Sobic001G361700 Sobic001G361700 Sobic001G098600--Sobic001G361700 Sobic002G195300--Sobic005G065500 Sobic006G003700 Sobic006G003700 Sobic002G195300--Sobic006G003700 Sobic002G195300--Sobic004G223500 Sobic002G195300--Sobic002G195200 Sobic002G195300--Sobic004G245300 Sobic010G157000 Sobic010G157000 Sobic002G195300--Sobic010G157000 Sobic004G158050 Sobic004G158050 Sobic002G195300--Sobic004G158050 Sobic002G195300--Sobic005G217900 Sobic002G195300--Sobic007G215700 Sobic002G023000--Sobic007G058800 Sobic007G059100 Sobic007G059100 Sobic002G023000--Sobic007G059100 Sobic002G023000--Sobic002G195100 Sobic002G023000--Sobic002G195200 Sobic002G023000--Sobic007G214300 Sobic002G023000--Sobic007G215700 Sobic007G058900 Sobic007G058900 Sobic002G023000--Sobic007G058900 Sobic004G258300 Sobic004G258300 Sobic002G023000--Sobic004G258300 Sobic002G327700 Sobic002G327700 Sobic002G023000--Sobic002G327700
Octagon: transcription factors


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