Gene annotation
Transcriptome id Sobic.008G191300.1
Synonym AATP1, Sb08g023150
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ATPase 3, putative, expressed
UniProt C5YT31
Pfam PF00004 PF14363
Panther DB PTHR23070 PTHR23070:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT5G40010 : AAA-ATPase 1
RAP-DB (Rice) LOC_Os12g24320.1 : ATPase 3, putative, expressed
MaizeGDB (Corn) Zm00025a016039 , Zm00025a045292 , Zm00025a004879 , Zm00025a010901 , Zm00025a004881 , Zm00025a008606
Brachypodium KQK15981 , KQJ90448 , KQJ85588 , KQK20482 , KQK20481 , KQJ85593 , KQJ85594 , KQK15975 , PNT76854 , PNT76855 , PNT76856 , PNT76857 , KQJ98547 , KQJ90344 , KQK20476 , KQK20474 , KQK20475
Barley HORVU5Hr1G000640.9 , HORVU5Hr1G000640.8 , HORVU5Hr1G000640.1 , HORVU5Hr1G000640.3 , HORVU5Hr1G000640.5 , HORVU5Hr1G000640.4 , HORVU5Hr1G000640.7 , HORVU5Hr1G000640.6 , HORVU2Hr1G046240.1 , HORVU2Hr1G046240.2 , HORVU2Hr1G046240.3 , HORVU5Hr1G026270.4 , HORVU5Hr1G026270.5 , HORVU5Hr1G026270.6 , HORVU5Hr1G026270.1 , HORVU5Hr1G026270.2 , HORVU5Hr1G026270.3 , HORVU3Hr1G117690.10 , HORVU2Hr1G046310.2 , HORVU2Hr1G046330.4 , HORVU2Hr1G046330.1 , HORVU2Hr1G046330.2 , HORVU2Hr1G046330.3 , HORVU5Hr1G124260.2 , HORVU5Hr1G124260.1 , HORVU3Hr1G114150.2 , HORVU2Hr1G046310.3 , HORVU5Hr1G124290.8 , HORVU5Hr1G124290.7 , HORVU5Hr1G124290.6 , HORVU5Hr1G124290.5 , HORVU5Hr1G124290.4 , HORVU5Hr1G124290.3 , HORVU5Hr1G124290.2 , HORVU5Hr1G124290.1 , HORVU3Hr1G117690.3 , HORVU3Hr1G117690.2 , HORVU3Hr1G117690.1 , HORVU3Hr1G117690.7 , HORVU3Hr1G117690.6 , HORVU3Hr1G117690.5 , HORVU3Hr1G117690.4 , HORVU3Hr1G117690.9 , HORVU3Hr1G117690.8 , HORVU3Hr1G086670.1 , HORVU3Hr1G086670.2 , HORVU3Hr1G086670.3 , HORVU3Hr1G086670.4 , HORVU3Hr1G086670.5 , HORVU1Hr1G063390.4 , HORVU1Hr1G063390.5 , HORVU1Hr1G063390.1 , HORVU1Hr1G063390.2 , HORVU1Hr1G063390.3 , HORVU5Hr1G107410.2 , HORVU5Hr1G107410.3 , HORVU5Hr1G107410.4 , HORVU3Hr1G114150.1 , HORVU5Hr1G063340.3 , HORVU5Hr1G063340.2 , HORVU5Hr1G063340.1
Wheat TraesCS2B02G247000 , TraesCS3A02G357100 , TraesCS2A02G221700 , TraesCS3B02G389700 , TraesCS3D02G350900 , TraesCS7D02G502900 , TraesCS2D02G227400 , TraesCS3D02G351000 , TraesCS2A02G221500 , TraesCS4A02G384300 , TraesCS3A02G356800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G227800 membrane attack complex component/perforin/complement C9, putative, expressed -
2 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
3 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
4 Sobic.006G061300 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
5 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
6 Sobic.004G187800 RING-H2 finger protein ATL1O, putative, expressed -
7 Sobic.003G258700 expressed protein -
8 Sobic.002G249600 OsWAK80 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.001G390700 VQ domain containing protein, putative, expressed -
10 Sobic.007G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@patatin, putative, expressed -
11 Sobic.001G123700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.010G273700 no apical meristem protein, putative, expressed -
13 Sobic.005G103600 - -
14 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
15 Sobic.004G167300 OsFBX51 - F-box domain containing protein, expressed -
16 Sobic.003G263300 Protein kinase domain containing protein, expressed -
17 Sobic.001G071300 expressed protein -
18 Sobic.001G339200 - -
19 Sobic.004G112400 plant protein of unknown function domain containing protein, expressed -
20 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -


Gene co-expression network
sample Sobic008G191300 Sobic008G191300 Sobic009G227800 Sobic009G227800 Sobic008G191300--Sobic009G227800 Sobic003G138400 Sobic003G138400 Sobic008G191300--Sobic003G138400 Sobic001G314300 Sobic001G314300 Sobic008G191300--Sobic001G314300 Sobic006G061300 Sobic006G061300 Sobic008G191300--Sobic006G061300 Sobic006G114200 Sobic006G114200 Sobic008G191300--Sobic006G114200 Sobic004G187800 Sobic004G187800 Sobic008G191300--Sobic004G187800 Sobic003G258700 Sobic003G258700 Sobic008G191300--Sobic003G258700 Sobic002G249600 Sobic002G249600 Sobic008G191300--Sobic002G249600 Sobic001G390700 Sobic001G390700 Sobic008G191300--Sobic001G390700 Sobic010G273700 Sobic010G273700 Sobic009G227800--Sobic010G273700 Sobic003G109832 Sobic003G109832 Sobic009G227800--Sobic003G109832 Sobic009G227800--Sobic001G314300 Sobic009G227800--Sobic003G138400 Sobic004G092000 Sobic004G092000 Sobic009G227800--Sobic004G092000 Sobic003G376200 Sobic003G376200 Sobic009G227800--Sobic003G376200 Sobic004G006500 Sobic004G006500 Sobic009G227800--Sobic004G006500 Sobic002G195800 Sobic002G195800 Sobic009G227800--Sobic002G195800 Sobic001G339600 Sobic001G339600 Sobic009G227800--Sobic001G339600 Sobic003G138400--Sobic010G273700 Sobic004G220600 Sobic004G220600 Sobic003G138400--Sobic004G220600 Sobic003G138400--Sobic004G006500 Sobic003G138400--Sobic001G339600 Sobic003G138400--Sobic009G227800 Sobic004G169900 Sobic004G169900 Sobic003G138400--Sobic004G169900 Sobic003G138400--Sobic004G092000 Sobic002G216500 Sobic002G216500 Sobic003G138400--Sobic002G216500 Sobic009G010400 Sobic009G010400 Sobic003G138400--Sobic009G010400 Sobic001G314300--Sobic006G114200 Sobic001G095750 Sobic001G095750 Sobic001G314300--Sobic001G095750 Sobic001G314300--Sobic003G109832 Sobic001G314300--Sobic009G227800 Sobic001G314700 Sobic001G314700 Sobic001G314300--Sobic001G314700 Sobic001G314300--Sobic004G092000 Sobic001G314300--Sobic010G273700 Sobic002G185200 Sobic002G185200 Sobic001G314300--Sobic002G185200 Sobic003G339900 Sobic003G339900 Sobic001G314300--Sobic003G339900 Sobic010G203600 Sobic010G203600 Sobic006G061300--Sobic010G203600 Sobic009G000200 Sobic009G000200 Sobic006G061300--Sobic009G000200 Sobic007G011700 Sobic007G011700 Sobic006G061300--Sobic007G011700 Sobic003G016600 Sobic003G016600 Sobic006G061300--Sobic003G016600 Sobic001G401800 Sobic001G401800 Sobic006G061300--Sobic001G401800 Sobic003G321300 Sobic003G321300 Sobic006G061300--Sobic003G321300 Sobic001G454200 Sobic001G454200 Sobic006G061300--Sobic001G454200 Sobic003G263300 Sobic003G263300 Sobic006G061300--Sobic003G263300 Sobic002G301800 Sobic002G301800 Sobic006G061300--Sobic002G301800 Sobic006G114200--Sobic001G314300 Sobic006G114200--Sobic001G095750 Sobic006G114200--Sobic004G006500 Sobic006G114200--Sobic002G185200 Sobic006G114200--Sobic001G314700 Sobic001G118900 Sobic001G118900 Sobic006G114200--Sobic001G118900 Sobic006G114200--Sobic002G195800 Sobic001G030600 Sobic001G030600 Sobic006G114200--Sobic001G030600 Sobic006G113800 Sobic006G113800 Sobic006G114200--Sobic006G113800 Sobic002G294600 Sobic002G294600 Sobic004G187800--Sobic002G294600 Sobic004G187800--Sobic002G185200 Sobic004G187800--Sobic009G010400 Sobic004G065900 Sobic004G065900 Sobic004G187800--Sobic004G065900 Sobic002G418900 Sobic002G418900 Sobic004G187800--Sobic002G418900 Sobic004G187800--Sobic004G006500 Sobic001G406300 Sobic001G406300 Sobic004G187800--Sobic001G406300 Sobic004G297600 Sobic004G297600 Sobic004G187800--Sobic004G297600 Sobic002G207300 Sobic002G207300 Sobic004G187800--Sobic002G207300 Sobic004G160300 Sobic004G160300 Sobic003G258700--Sobic004G160300 Sobic002G202800 Sobic002G202800 Sobic003G258700--Sobic002G202800 Sobic001G363200 Sobic001G363200 Sobic003G258700--Sobic001G363200 Sobic005G165900 Sobic005G165900 Sobic003G258700--Sobic005G165900 Sobic004G181200 Sobic004G181200 Sobic003G258700--Sobic004G181200 Sobic003G291700 Sobic003G291700 Sobic003G258700--Sobic003G291700 Sobic003G242800 Sobic003G242800 Sobic003G258700--Sobic003G242800 Sobic002G386200 Sobic002G386200 Sobic003G258700--Sobic002G386200 Sobic003G037100 Sobic003G037100 Sobic003G258700--Sobic003G037100 Sobic010G172300 Sobic010G172300 Sobic002G249600--Sobic010G172300 Sobic002G249600--Sobic003G258700 Sobic002G249600--Sobic002G202800 Sobic002G249600--Sobic004G160300 Sobic002G249600--Sobic003G291700 Sobic002G064200 Sobic002G064200 Sobic002G249600--Sobic002G064200 Sobic008G060300 Sobic008G060300 Sobic002G249600--Sobic008G060300 Sobic002G202700 Sobic002G202700 Sobic002G249600--Sobic002G202700 Sobic006G113900 Sobic006G113900 Sobic002G249600--Sobic006G113900 Sobic001G095700 Sobic001G095700 Sobic001G390700--Sobic001G095700 Sobic001G097700 Sobic001G097700 Sobic001G390700--Sobic001G097700 Sobic003G341100 Sobic003G341100 Sobic001G390700--Sobic003G341100 Sobic009G044400 Sobic009G044400 Sobic001G390700--Sobic009G044400 Sobic001G390700--Sobic004G065900 Sobic007G077100 Sobic007G077100 Sobic001G390700--Sobic007G077100 Sobic002G232800 Sobic002G232800 Sobic001G390700--Sobic002G232800 Sobic010G023200 Sobic010G023200 Sobic001G390700--Sobic010G023200 Sobic003G268900 Sobic003G268900 Sobic001G390700--Sobic003G268900
Octagon: transcription factors


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