Gene annotation
Transcriptome id Sobic.001G071300.1
Synonym Sb01g006430
Functional annotation expressed protein
UniProt C5WZ40
Pfam -
Panther DB PTHR32133 PTHR32133:SF85
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g56500.1 : expressed protein
MaizeGDB (Corn) Zm00025a016674
Brachypodium -
Barley HORVU5Hr1G099330.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G165900 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.004G220600 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
3 Sobic.004G169900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@U-box domain containing protein, expressed -
4 Sobic.003G258700 expressed protein -
5 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.009G214300 expressed protein -
7 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
8 Sobic.003G376200 expressed protein -
9 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
10 Sobic.002G174300 senescence-related tran- scription factor gene(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY74, expressed -
11 Sobic.007G139900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.009G100500 WRKY53, expressed K13424: WRKY transcription factor 33
13 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
14 Sobic.005G103600 - -
15 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
16 Sobic.006G257700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal transport/detoxification protein, putative, expressed -
17 Sobic.001G030600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
18 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
19 Sobic.003G193800 calmodulin-binding protein, putative, expressed -
20 Sobic.002G195800 inactive receptor kinase At2g26730 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G071300 Sobic001G071300 Sobic005G165900 Sobic005G165900 Sobic001G071300--Sobic005G165900 Sobic004G220600 Sobic004G220600 Sobic001G071300--Sobic004G220600 Sobic004G169900 Sobic004G169900 Sobic001G071300--Sobic004G169900 Sobic003G258700 Sobic003G258700 Sobic001G071300--Sobic003G258700 Sobic002G216500 Sobic002G216500 Sobic001G071300--Sobic002G216500 Sobic009G214300 Sobic009G214300 Sobic001G071300--Sobic009G214300 Sobic003G138400 Sobic003G138400 Sobic001G071300--Sobic003G138400 Sobic003G376200 Sobic003G376200 Sobic001G071300--Sobic003G376200 Sobic009G010400 Sobic009G010400 Sobic001G071300--Sobic009G010400 Sobic002G174300 Sobic002G174300 Sobic005G165900--Sobic002G174300 Sobic005G165900--Sobic003G258700 Sobic002G386200 Sobic002G386200 Sobic005G165900--Sobic002G386200 Sobic004G160300 Sobic004G160300 Sobic005G165900--Sobic004G160300 Sobic005G165900--Sobic001G071300 Sobic005G165900--Sobic004G169900 Sobic004G181200 Sobic004G181200 Sobic005G165900--Sobic004G181200 Sobic005G165900--Sobic009G214300 Sobic005G165900--Sobic004G220600 Sobic004G220600--Sobic002G216500 Sobic006G168000 Sobic006G168000 Sobic004G220600--Sobic006G168000 Sobic005G218500 Sobic005G218500 Sobic004G220600--Sobic005G218500 Sobic003G378301 Sobic003G378301 Sobic004G220600--Sobic003G378301 Sobic004G220600--Sobic003G138400 Sobic004G220600--Sobic003G376200 Sobic008G181801 Sobic008G181801 Sobic004G220600--Sobic008G181801 Sobic009G241500 Sobic009G241500 Sobic004G220600--Sobic009G241500 Sobic008G075400 Sobic008G075400 Sobic004G220600--Sobic008G075400 Sobic001G146400 Sobic001G146400 Sobic004G169900--Sobic001G146400 Sobic004G169900--Sobic009G010400 Sobic010G018300 Sobic010G018300 Sobic004G169900--Sobic010G018300 Sobic004G169900--Sobic002G386200 Sobic004G006500 Sobic004G006500 Sobic004G169900--Sobic004G006500 Sobic010G102000 Sobic010G102000 Sobic004G169900--Sobic010G102000 Sobic004G169900--Sobic005G165900 Sobic006G257700 Sobic006G257700 Sobic004G169900--Sobic006G257700 Sobic001G064900 Sobic001G064900 Sobic004G169900--Sobic001G064900 Sobic003G258700--Sobic004G160300 Sobic002G202800 Sobic002G202800 Sobic003G258700--Sobic002G202800 Sobic001G363200 Sobic001G363200 Sobic003G258700--Sobic001G363200 Sobic003G258700--Sobic005G165900 Sobic003G258700--Sobic004G181200 Sobic003G291700 Sobic003G291700 Sobic003G258700--Sobic003G291700 Sobic003G242800 Sobic003G242800 Sobic003G258700--Sobic003G242800 Sobic003G258700--Sobic002G386200 Sobic003G037100 Sobic003G037100 Sobic003G258700--Sobic003G037100 Sobic002G216500--Sobic004G220600 Sobic006G045000 Sobic006G045000 Sobic002G216500--Sobic006G045000 Sobic002G216500--Sobic005G218500 Sobic010G214200 Sobic010G214200 Sobic002G216500--Sobic010G214200 Sobic004G209500 Sobic004G209500 Sobic002G216500--Sobic004G209500 Sobic006G014700 Sobic006G014700 Sobic002G216500--Sobic006G014700 Sobic002G216500--Sobic003G378301 Sobic003G310500 Sobic003G310500 Sobic002G216500--Sobic003G310500 Sobic004G217700 Sobic004G217700 Sobic002G216500--Sobic004G217700 Sobic004G195800 Sobic004G195800 Sobic009G214300--Sobic004G195800 Sobic010G120800 Sobic010G120800 Sobic009G214300--Sobic010G120800 Sobic009G214300--Sobic002G174300 Sobic009G214300--Sobic010G214200 Sobic005G085500 Sobic005G085500 Sobic009G214300--Sobic005G085500 Sobic002G202700 Sobic002G202700 Sobic009G214300--Sobic002G202700 Sobic002G209100 Sobic002G209100 Sobic009G214300--Sobic002G209100 Sobic010G163150 Sobic010G163150 Sobic009G214300--Sobic010G163150 Sobic009G214300--Sobic002G216500 Sobic010G273700 Sobic010G273700 Sobic003G138400--Sobic010G273700 Sobic003G138400--Sobic004G220600 Sobic003G138400--Sobic004G006500 Sobic001G339600 Sobic001G339600 Sobic003G138400--Sobic001G339600 Sobic009G227800 Sobic009G227800 Sobic003G138400--Sobic009G227800 Sobic003G138400--Sobic004G169900 Sobic004G092000 Sobic004G092000 Sobic003G138400--Sobic004G092000 Sobic003G138400--Sobic002G216500 Sobic003G138400--Sobic009G010400 Sobic003G376200--Sobic004G220600 Sobic003G376200--Sobic002G216500 Sobic003G376200--Sobic004G092000 Sobic003G376200--Sobic003G291700 Sobic003G376200--Sobic005G218500 Sobic003G376200--Sobic002G209100 Sobic003G376200--Sobic010G273700 Sobic008G060300 Sobic008G060300 Sobic003G376200--Sobic008G060300 Sobic002G195800 Sobic002G195800 Sobic003G376200--Sobic002G195800 Sobic004G086800 Sobic004G086800 Sobic009G010400--Sobic004G086800 Sobic004G065900 Sobic004G065900 Sobic009G010400--Sobic004G065900 Sobic009G010400--Sobic001G064900 Sobic009G100500 Sobic009G100500 Sobic009G010400--Sobic009G100500 Sobic009G010400--Sobic006G257700 Sobic006G259000 Sobic006G259000 Sobic009G010400--Sobic006G259000 Sobic001G095700 Sobic001G095700 Sobic009G010400--Sobic001G095700 Sobic009G010400--Sobic010G102000 Sobic009G010400--Sobic004G006500
Octagon: transcription factors


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