Gene annotation
Transcriptome id Sobic.005G103600.1
Synonym
Functional annotation -
UniProt A0A1B6PRH2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G103600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G257700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal transport/detoxification protein, putative, expressed -
2 Sobic.001G095700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
4 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
5 Sobic.002G341900 - -
6 Sobic.004G297600 triacylglycerol lipase like protein, putative, expressed -
7 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
8 Sobic.009G100500 WRKY53, expressed K13424: WRKY transcription factor 33
9 Sobic.001G071300 expressed protein -
10 Sobic.007G145700 expressed protein -
11 Sobic.001G390700 VQ domain containing protein, putative, expressed -
12 Sobic.007G143400 tetraspanin family protein, putative, expressed -
13 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
14 Sobic.007G035500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@Protein aromatic-L-amino-acid decarboxylase (Os)(PubMedID : 27208977)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
15 Sobic.004G187800 RING-H2 finger protein ATL1O, putative, expressed -
16 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
17 Sobic.010G221032 - -
18 Sobic.001G064900 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
19 Sobic.002G232800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
20 Sobic.002G199500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CaM - probable calciumbinding protein CML45(PubMedID : 31721651)@EF hand family protein, putative, expressed K02183: calmodulin


Gene co-expression network
sample Sobic005G103600 Sobic005G103600 Sobic006G257700 Sobic006G257700 Sobic005G103600--Sobic006G257700 Sobic001G095700 Sobic001G095700 Sobic005G103600--Sobic001G095700 Sobic002G294600 Sobic002G294600 Sobic005G103600--Sobic002G294600 Sobic009G010400 Sobic009G010400 Sobic005G103600--Sobic009G010400 Sobic002G341900 Sobic002G341900 Sobic005G103600--Sobic002G341900 Sobic004G297600 Sobic004G297600 Sobic005G103600--Sobic004G297600 Sobic010G102000 Sobic010G102000 Sobic005G103600--Sobic010G102000 Sobic009G100500 Sobic009G100500 Sobic005G103600--Sobic009G100500 Sobic001G071300 Sobic001G071300 Sobic005G103600--Sobic001G071300 Sobic001G064900 Sobic001G064900 Sobic006G257700--Sobic001G064900 Sobic006G257700--Sobic009G010400 Sobic006G257700--Sobic010G102000 Sobic006G257700--Sobic004G297600 Sobic006G257700--Sobic001G095700 Sobic001G287600 Sobic001G287600 Sobic006G257700--Sobic001G287600 Sobic010G023200 Sobic010G023200 Sobic006G257700--Sobic010G023200 Sobic007G077300 Sobic007G077300 Sobic006G257700--Sobic007G077300 Sobic006G259000 Sobic006G259000 Sobic006G257700--Sobic006G259000 Sobic004G065900 Sobic004G065900 Sobic001G095700--Sobic004G065900 Sobic003G268900 Sobic003G268900 Sobic001G095700--Sobic003G268900 Sobic001G095700--Sobic002G294600 Sobic002G367900 Sobic002G367900 Sobic001G095700--Sobic002G367900 Sobic007G145700 Sobic007G145700 Sobic001G095700--Sobic007G145700 Sobic006G273800 Sobic006G273800 Sobic001G095700--Sobic006G273800 Sobic007G051800 Sobic007G051800 Sobic001G095700--Sobic007G051800 Sobic001G095700--Sobic001G064900 Sobic003G341100 Sobic003G341100 Sobic001G095700--Sobic003G341100 Sobic002G294600--Sobic007G145700 Sobic001G462800 Sobic001G462800 Sobic002G294600--Sobic001G462800 Sobic002G294600--Sobic001G095700 Sobic002G294600--Sobic002G367900 Sobic002G294600--Sobic004G065900 Sobic002G217100 Sobic002G217100 Sobic002G294600--Sobic002G217100 Sobic002G294600--Sobic003G341100 Sobic006G146500 Sobic006G146500 Sobic002G294600--Sobic006G146500 Sobic001G118900 Sobic001G118900 Sobic002G294600--Sobic001G118900 Sobic004G086800 Sobic004G086800 Sobic009G010400--Sobic004G086800 Sobic009G010400--Sobic004G065900 Sobic009G010400--Sobic001G064900 Sobic009G010400--Sobic009G100500 Sobic009G010400--Sobic006G257700 Sobic009G010400--Sobic006G259000 Sobic009G010400--Sobic001G095700 Sobic009G010400--Sobic010G102000 Sobic004G006500 Sobic004G006500 Sobic009G010400--Sobic004G006500 Sobic007G143400 Sobic007G143400 Sobic002G341900--Sobic007G143400 Sobic002G341900--Sobic007G145700 Sobic002G341900--Sobic010G102000 Sobic002G341900--Sobic001G064900 Sobic002G341900--Sobic002G294600 Sobic001G489500 Sobic001G489500 Sobic002G341900--Sobic001G489500 Sobic002G341900--Sobic001G095700 Sobic002G341900--Sobic006G273800 Sobic009G217500 Sobic009G217500 Sobic002G341900--Sobic009G217500 Sobic004G297600--Sobic006G257700 Sobic004G297600--Sobic010G102000 Sobic004G297600--Sobic009G010400 Sobic001G195100 Sobic001G195100 Sobic004G297600--Sobic001G195100 Sobic001G314800 Sobic001G314800 Sobic004G297600--Sobic001G314800 Sobic010G105300 Sobic010G105300 Sobic004G297600--Sobic010G105300 Sobic004G297600--Sobic001G489500 Sobic004G297600--Sobic002G341900 Sobic004G297600--Sobic001G064900 Sobic010G102000--Sobic009G217500 Sobic010G102000--Sobic010G105300 Sobic010G102000--Sobic003G341100 Sobic002G232800 Sobic002G232800 Sobic010G102000--Sobic002G232800 Sobic010G102000--Sobic001G064900 Sobic010G102000--Sobic007G145700 Sobic010G102000--Sobic010G023200 Sobic007G077100 Sobic007G077100 Sobic010G102000--Sobic007G077100 Sobic010G102000--Sobic006G273800 Sobic003G193800 Sobic003G193800 Sobic009G100500--Sobic003G193800 Sobic009G100500--Sobic009G010400 Sobic007G090300 Sobic007G090300 Sobic009G100500--Sobic007G090300 Sobic010G221032 Sobic010G221032 Sobic009G100500--Sobic010G221032 Sobic009G100500--Sobic004G065900 Sobic001G410100 Sobic001G410100 Sobic009G100500--Sobic001G410100 Sobic002G199500 Sobic002G199500 Sobic009G100500--Sobic002G199500 Sobic002G207300 Sobic002G207300 Sobic009G100500--Sobic002G207300 Sobic009G100500--Sobic006G259000 Sobic005G165900 Sobic005G165900 Sobic001G071300--Sobic005G165900 Sobic004G220600 Sobic004G220600 Sobic001G071300--Sobic004G220600 Sobic004G169900 Sobic004G169900 Sobic001G071300--Sobic004G169900 Sobic003G258700 Sobic003G258700 Sobic001G071300--Sobic003G258700 Sobic002G216500 Sobic002G216500 Sobic001G071300--Sobic002G216500 Sobic009G214300 Sobic009G214300 Sobic001G071300--Sobic009G214300 Sobic003G138400 Sobic003G138400 Sobic001G071300--Sobic003G138400 Sobic003G376200 Sobic003G376200 Sobic001G071300--Sobic003G376200 Sobic001G071300--Sobic009G010400
Octagon: transcription factors


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