Gene annotation
Transcriptome id Sobic.004G167300.1
Synonym Sb04g021870
Functional annotation OsFBX51 - F-box domain containing protein, expressed
UniProt A0A1Z5RMU0
Pfam -
Panther DB PTHR33736 PTHR33736:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36090 : F-box family protein
RAP-DB (Rice) LOC_Os02g33240.1 : OsFBX51 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020563
Brachypodium KQJ99751
Barley HORVU5Hr1G113290.4 , HORVU5Hr1G113290.1 , HORVU5Hr1G113290.3 , HORVU5Hr1G113290.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G067400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.001G381300 WRKY79, expressed -
3 Sobic.010G018300 expressed protein -
4 Sobic.006G113000 Copper transport protein family("PubMedID : 26759170,PubMedID : 24597475")@expressed protein -
5 Sobic.001G339200 - -
6 Sobic.010G275001 - -
7 Sobic.010G099000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
8 Sobic.001G146400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
9 Sobic.007G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@patatin, putative, expressed -
10 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
11 Sobic.008G142100 No apical meristem protein, putative, expressed -
12 Sobic.001G319200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
14 Sobic.002G067300 ATPase, putative, expressed -
15 Sobic.009G216050 - -
16 Sobic.004G349300 tyrosine protein kinase domain containing protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
17 Sobic.006G246200 protein kinase, putative, expressed -
18 Sobic.002G199500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CaM - probable calciumbinding protein CML45(PubMedID : 31721651)@EF hand family protein, putative, expressed K02183: calmodulin
19 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.001G362001 Probable serine/threonineprotein kinase PBL15(PubMedID : 31721651) -


Gene co-expression network
sample Sobic004G167300 Sobic004G167300 Sobic009G067400 Sobic009G067400 Sobic004G167300--Sobic009G067400 Sobic001G381300 Sobic001G381300 Sobic004G167300--Sobic001G381300 Sobic010G018300 Sobic010G018300 Sobic004G167300--Sobic010G018300 Sobic006G113000 Sobic006G113000 Sobic004G167300--Sobic006G113000 Sobic001G339200 Sobic001G339200 Sobic004G167300--Sobic001G339200 Sobic010G275001 Sobic010G275001 Sobic004G167300--Sobic010G275001 Sobic010G099000 Sobic010G099000 Sobic004G167300--Sobic010G099000 Sobic001G146400 Sobic001G146400 Sobic004G167300--Sobic001G146400 Sobic007G158500 Sobic007G158500 Sobic004G167300--Sobic007G158500 Sobic009G067400--Sobic010G018300 Sobic009G216050 Sobic009G216050 Sobic009G067400--Sobic009G216050 Sobic009G067400--Sobic001G381300 Sobic009G067400--Sobic001G146400 Sobic004G209500 Sobic004G209500 Sobic009G067400--Sobic004G209500 Sobic009G121600 Sobic009G121600 Sobic009G067400--Sobic009G121600 Sobic005G226100 Sobic005G226100 Sobic009G067400--Sobic005G226100 Sobic005G041000 Sobic005G041000 Sobic009G067400--Sobic005G041000 Sobic002G407200 Sobic002G407200 Sobic009G067400--Sobic002G407200 Sobic001G381300--Sobic005G226100 Sobic005G193600 Sobic005G193600 Sobic001G381300--Sobic005G193600 Sobic008G181801 Sobic008G181801 Sobic001G381300--Sobic008G181801 Sobic006G246200 Sobic006G246200 Sobic001G381300--Sobic006G246200 Sobic001G146500 Sobic001G146500 Sobic001G381300--Sobic001G146500 Sobic009G241500 Sobic009G241500 Sobic001G381300--Sobic009G241500 Sobic001G381300--Sobic009G121600 Sobic003G037100 Sobic003G037100 Sobic001G381300--Sobic003G037100 Sobic006G229500 Sobic006G229500 Sobic001G381300--Sobic006G229500 Sobic002G386200 Sobic002G386200 Sobic010G018300--Sobic002G386200 Sobic010G018300--Sobic001G146400 Sobic010G018300--Sobic009G067400 Sobic010G018300--Sobic001G146500 Sobic001G259500 Sobic001G259500 Sobic010G018300--Sobic001G259500 Sobic010G192900 Sobic010G192900 Sobic006G113000--Sobic010G192900 Sobic006G009000 Sobic006G009000 Sobic006G113000--Sobic006G009000 Sobic005G080200 Sobic005G080200 Sobic006G113000--Sobic005G080200 Sobic001G195100 Sobic001G195100 Sobic006G113000--Sobic001G195100 Sobic004G114400 Sobic004G114400 Sobic006G113000--Sobic004G114400 Sobic006G246100 Sobic006G246100 Sobic006G113000--Sobic006G246100 Sobic006G113000--Sobic010G099000 Sobic001G319200 Sobic001G319200 Sobic006G113000--Sobic001G319200 Sobic002G067300 Sobic002G067300 Sobic006G113000--Sobic002G067300 Sobic001G339200--Sobic009G067400 Sobic006G014700 Sobic006G014700 Sobic001G339200--Sobic006G014700 Sobic001G339200--Sobic001G146400 Sobic002G199500 Sobic002G199500 Sobic001G339200--Sobic002G199500 Sobic001G059400 Sobic001G059400 Sobic001G339200--Sobic001G059400 Sobic007G118301 Sobic007G118301 Sobic001G339200--Sobic007G118301 Sobic004G297600 Sobic004G297600 Sobic001G339200--Sobic004G297600 Sobic001G339200--Sobic001G195100 Sobic001G339200--Sobic001G381300 Sobic002G269032 Sobic002G269032 Sobic010G275001--Sobic002G269032 Sobic010G275001--Sobic010G018300 Sobic010G275001--Sobic001G381300 Sobic010G275001--Sobic003G037100 Sobic010G275001--Sobic005G226100 Sobic010G275001--Sobic009G067400 Sobic010G275001--Sobic001G146400 Sobic010G275001--Sobic001G146500 Sobic002G202800 Sobic002G202800 Sobic010G275001--Sobic002G202800 Sobic010G099000--Sobic009G067400 Sobic008G018600 Sobic008G018600 Sobic010G099000--Sobic008G018600 Sobic010G099000--Sobic002G407200 Sobic010G099000--Sobic009G216050 Sobic001G314800 Sobic001G314800 Sobic010G099000--Sobic001G314800 Sobic010G099000--Sobic006G113000 Sobic010G099000--Sobic001G195100 Sobic003G310500 Sobic003G310500 Sobic010G099000--Sobic003G310500 Sobic008G181300 Sobic008G181300 Sobic010G099000--Sobic008G181300 Sobic001G146400--Sobic010G018300 Sobic001G146400--Sobic002G386200 Sobic001G146400--Sobic002G199500 Sobic004G169900 Sobic004G169900 Sobic001G146400--Sobic004G169900 Sobic001G146400--Sobic001G146500 Sobic001G146400--Sobic009G067400 Sobic001G146400--Sobic001G381300 Sobic010G163150 Sobic010G163150 Sobic001G146400--Sobic010G163150 Sobic001G146400--Sobic009G121600 Sobic009G171600 Sobic009G171600 Sobic007G158500--Sobic009G171600 Sobic007G158500--Sobic010G018300 Sobic007G158500--Sobic002G386200 Sobic001G331000 Sobic001G331000 Sobic007G158500--Sobic001G331000 Sobic007G158500--Sobic001G319200 Sobic009G034800 Sobic009G034800 Sobic007G158500--Sobic009G034800 Sobic007G158500--Sobic004G167300 Sobic007G158500--Sobic001G146400 Sobic007G158500--Sobic009G067400
Octagon: transcription factors


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