Gene annotation
Transcriptome id Sobic.010G099000.1
Synonym Sb10g008610
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
spotted leaf 11, putative, expressed
UniProt A0A194YIB2
Pfam PF04564
Panther DB PTHR23315 PTHR23315:SF79
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT5G62560 : RING/U-box superfamily protein with ARM repeat domain
RAP-DB (Rice) LOC_Os06g13080.1 : spotted leaf 11, putative, expressed
MaizeGDB (Corn) Zm00025a049419
Brachypodium KQJ90118 , KQK18795
Barley HORVU7Hr1G046920.1 , HORVU7Hr1G046920.2 , HORVU7Hr1G039760.1 , HORVU7Hr1G039760.2 , HORVU7Hr1G039760.3
Wheat TraesCS7B02G194100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G067400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.008G018600 harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.002G407200 sex determination protein tasselseed-2, putative, expressed -
4 Sobic.009G216050 - -
5 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
6 Sobic.006G113000 Copper transport protein family("PubMedID : 26759170,PubMedID : 24597475")@expressed protein -
7 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
8 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
9 Sobic.008G181300 expressed protein -
10 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G296300 WRKY13, expressed -
12 Sobic.004G174000 expressed protein -
13 Sobic.004G114400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
14 Sobic.004G333300 serine-rich protein, putative, expressed -
15 Sobic.004G167300 OsFBX51 - F-box domain containing protein, expressed -
16 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
18 Sobic.008G142100 No apical meristem protein, putative, expressed -
19 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
20 Sobic.009G233900 dehydrogenase, putative, expressed -


Gene co-expression network
sample Sobic010G099000 Sobic010G099000 Sobic009G067400 Sobic009G067400 Sobic010G099000--Sobic009G067400 Sobic008G018600 Sobic008G018600 Sobic010G099000--Sobic008G018600 Sobic002G407200 Sobic002G407200 Sobic010G099000--Sobic002G407200 Sobic009G216050 Sobic009G216050 Sobic010G099000--Sobic009G216050 Sobic001G314800 Sobic001G314800 Sobic010G099000--Sobic001G314800 Sobic006G113000 Sobic006G113000 Sobic010G099000--Sobic006G113000 Sobic001G195100 Sobic001G195100 Sobic010G099000--Sobic001G195100 Sobic003G310500 Sobic003G310500 Sobic010G099000--Sobic003G310500 Sobic008G181300 Sobic008G181300 Sobic010G099000--Sobic008G181300 Sobic010G018300 Sobic010G018300 Sobic009G067400--Sobic010G018300 Sobic009G067400--Sobic009G216050 Sobic001G381300 Sobic001G381300 Sobic009G067400--Sobic001G381300 Sobic001G146400 Sobic001G146400 Sobic009G067400--Sobic001G146400 Sobic004G209500 Sobic004G209500 Sobic009G067400--Sobic004G209500 Sobic009G121600 Sobic009G121600 Sobic009G067400--Sobic009G121600 Sobic005G226100 Sobic005G226100 Sobic009G067400--Sobic005G226100 Sobic005G041000 Sobic005G041000 Sobic009G067400--Sobic005G041000 Sobic009G067400--Sobic002G407200 Sobic008G018600--Sobic002G407200 Sobic001G056500 Sobic001G056500 Sobic008G018600--Sobic001G056500 Sobic004G195800 Sobic004G195800 Sobic008G018600--Sobic004G195800 Sobic008G018600--Sobic009G216050 Sobic010G214200 Sobic010G214200 Sobic008G018600--Sobic010G214200 Sobic004G217700 Sobic004G217700 Sobic008G018600--Sobic004G217700 Sobic008G018600--Sobic001G314800 Sobic008G018600--Sobic008G181300 Sobic001G182600 Sobic001G182600 Sobic008G018600--Sobic001G182600 Sobic002G407200--Sobic008G018600 Sobic002G407200--Sobic001G056500 Sobic002G407200--Sobic009G216050 Sobic002G407200--Sobic004G217700 Sobic004G101000 Sobic004G101000 Sobic002G407200--Sobic004G101000 Sobic002G407200--Sobic001G314800 Sobic002G407200--Sobic003G310500 Sobic009G192100 Sobic009G192100 Sobic002G407200--Sobic009G192100 Sobic008G038100 Sobic008G038100 Sobic002G407200--Sobic008G038100 Sobic009G216050--Sobic004G209500 Sobic006G045000 Sobic006G045000 Sobic009G216050--Sobic006G045000 Sobic009G216050--Sobic009G067400 Sobic009G216050--Sobic004G101000 Sobic009G216050--Sobic004G217700 Sobic004G174000 Sobic004G174000 Sobic009G216050--Sobic004G174000 SobicK044407 SobicK044407 Sobic009G216050--SobicK044407 Sobic009G216050--Sobic002G407200 Sobic008G181801 Sobic008G181801 Sobic009G216050--Sobic008G181801 Sobic001G314800--Sobic001G195100 Sobic006G014700 Sobic006G014700 Sobic001G314800--Sobic006G014700 Sobic006G265000 Sobic006G265000 Sobic001G314800--Sobic006G265000 Sobic001G088300 Sobic001G088300 Sobic001G314800--Sobic001G088300 Sobic001G314800--Sobic002G407200 Sobic001G314800--Sobic008G018600 Sobic003G296300 Sobic003G296300 Sobic001G314800--Sobic003G296300 Sobic001G314800--Sobic003G310500 Sobic001G314800--Sobic008G181300 Sobic010G192900 Sobic010G192900 Sobic006G113000--Sobic010G192900 Sobic006G009000 Sobic006G009000 Sobic006G113000--Sobic006G009000 Sobic005G080200 Sobic005G080200 Sobic006G113000--Sobic005G080200 Sobic006G113000--Sobic001G195100 Sobic004G114400 Sobic004G114400 Sobic006G113000--Sobic004G114400 Sobic006G246100 Sobic006G246100 Sobic006G113000--Sobic006G246100 Sobic006G113000--Sobic010G099000 Sobic001G319200 Sobic001G319200 Sobic006G113000--Sobic001G319200 Sobic002G067300 Sobic002G067300 Sobic006G113000--Sobic002G067300 Sobic001G195100--Sobic001G314800 Sobic003G102200 Sobic003G102200 Sobic001G195100--Sobic003G102200 Sobic004G297100 Sobic004G297100 Sobic001G195100--Sobic004G297100 Sobic001G059400 Sobic001G059400 Sobic001G195100--Sobic001G059400 Sobic007G118301 Sobic007G118301 Sobic001G195100--Sobic007G118301 Sobic007G090300 Sobic007G090300 Sobic001G195100--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic001G195100--Sobic005G109000 Sobic001G195100--Sobic001G088300 Sobic001G195100--Sobic003G296300 Sobic003G310500--Sobic001G056500 Sobic003G310500--Sobic008G038100 Sobic003G310500--Sobic004G209500 Sobic003G310500--Sobic010G214200 Sobic003G310500--Sobic009G216050 Sobic002G216500 Sobic002G216500 Sobic003G310500--Sobic002G216500 Sobic003G310500--Sobic006G045000 Sobic003G310500--Sobic008G181300 Sobic003G310500--Sobic006G014700 Sobic008G181300--Sobic009G192100 Sobic008G181300--Sobic003G310500 Sobic009G233900 Sobic009G233900 Sobic008G181300--Sobic009G233900 Sobic008G181300--Sobic008G038100 Sobic008G181300--Sobic008G018600 Sobic008G181300--Sobic001G314800 Sobic008G181300--Sobic002G407200 Sobic008G181300--Sobic009G216050 Sobic008G181300--Sobic004G209500
Octagon: transcription factors


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