Gene annotation
Transcriptome id Sobic.004G112400.1
Synonym Sb04g009190
Functional annotation plant protein of unknown function domain containing protein, expressed
UniProt C5XZ55
Pfam PF03140
Panther DB PTHR31549 PTHR31549:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50170 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os02g15500.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a034436
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G418500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY47, expressed -
2 Sobic.001G339300 expressed protein -
3 Sobic.001G339200 - -
4 Sobic.004G181300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
5 Sobic.010G275001 - -
6 Sobic.002G249600 OsWAK80 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.006G190000 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
8 Sobic.008G070900 expressed protein -
9 Sobic.003G325100 NB-ARC domain containing protein, expressed -
10 Sobic.007G115500 plant protein of unknown function domain containing protein, expressed -
11 Sobic.006G031200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DSBA-like thioredoxin domain containing protein, expressed -
12 Sobic.010G155300 VQ domain containing protein, putative, expressed -
13 Sobic.004G170300 RING-H2 finger protein, putative, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
14 Sobic.002G067300 ATPase, putative, expressed -
15 Sobic.008G191300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase 3, putative, expressed -
16 Sobic.001G381300 WRKY79, expressed -
17 Sobic.002G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY62, expressed -
18 Sobic.006G021900 Multidrug resistence-associated protein 4(PubMedID : 26320239)@ABC transporter family protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
19 Sobic.001G144400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acetyltransferase, GNAT family, putative, expressed -
20 Sobic.004G158050 - -


Gene co-expression network
sample Sobic004G112400 Sobic004G112400 Sobic002G418500 Sobic002G418500 Sobic004G112400--Sobic002G418500 Sobic001G339300 Sobic001G339300 Sobic004G112400--Sobic001G339300 Sobic001G339200 Sobic001G339200 Sobic004G112400--Sobic001G339200 Sobic004G181300 Sobic004G181300 Sobic004G112400--Sobic004G181300 Sobic010G275001 Sobic010G275001 Sobic004G112400--Sobic010G275001 Sobic002G249600 Sobic002G249600 Sobic004G112400--Sobic002G249600 Sobic006G190000 Sobic006G190000 Sobic004G112400--Sobic006G190000 Sobic008G070900 Sobic008G070900 Sobic004G112400--Sobic008G070900 Sobic003G325100 Sobic003G325100 Sobic004G112400--Sobic003G325100 Sobic001G146500 Sobic001G146500 Sobic002G418500--Sobic001G146500 Sobic001G381300 Sobic001G381300 Sobic002G418500--Sobic001G381300 Sobic005G226100 Sobic005G226100 Sobic002G418500--Sobic005G226100 Sobic002G241250 Sobic002G241250 Sobic002G418500--Sobic002G241250 Sobic002G418500--Sobic006G190000 Sobic003G291700 Sobic003G291700 Sobic002G418500--Sobic003G291700 Sobic010G273600 Sobic010G273600 Sobic002G418500--Sobic010G273600 Sobic006G246200 Sobic006G246200 Sobic002G418500--Sobic006G246200 Sobic004G052500 Sobic004G052500 Sobic002G418500--Sobic004G052500 Sobic004G158050 Sobic004G158050 Sobic001G339300--Sobic004G158050 Sobic002G195300 Sobic002G195300 Sobic001G339300--Sobic002G195300 Sobic006G003700 Sobic006G003700 Sobic001G339300--Sobic006G003700 Sobic001G339300--Sobic001G381300 Sobic009G174500 Sobic009G174500 Sobic001G339300--Sobic009G174500 Sobic001G339300--Sobic001G339200 Sobic005G186500 Sobic005G186500 Sobic001G339300--Sobic005G186500 Sobic001G339300--Sobic002G249600 Sobic007G215700 Sobic007G215700 Sobic001G339300--Sobic007G215700 Sobic009G067400 Sobic009G067400 Sobic001G339200--Sobic009G067400 Sobic006G014700 Sobic006G014700 Sobic001G339200--Sobic006G014700 Sobic001G146400 Sobic001G146400 Sobic001G339200--Sobic001G146400 Sobic002G199500 Sobic002G199500 Sobic001G339200--Sobic002G199500 Sobic001G059400 Sobic001G059400 Sobic001G339200--Sobic001G059400 Sobic007G118301 Sobic007G118301 Sobic001G339200--Sobic007G118301 Sobic004G297600 Sobic004G297600 Sobic001G339200--Sobic004G297600 Sobic001G195100 Sobic001G195100 Sobic001G339200--Sobic001G195100 Sobic001G339200--Sobic001G381300 Sobic010G018300 Sobic010G018300 Sobic004G181300--Sobic010G018300 Sobic004G181300--Sobic001G146400 Sobic010G163150 Sobic010G163150 Sobic004G181300--Sobic010G163150 Sobic004G169900 Sobic004G169900 Sobic004G181300--Sobic004G169900 Sobic004G160300 Sobic004G160300 Sobic004G181300--Sobic004G160300 Sobic002G386200 Sobic002G386200 Sobic004G181300--Sobic002G386200 Sobic003G037100 Sobic003G037100 Sobic004G181300--Sobic003G037100 Sobic004G181300--Sobic001G146500 Sobic004G181300--Sobic002G241250 Sobic002G269032 Sobic002G269032 Sobic010G275001--Sobic002G269032 Sobic010G275001--Sobic010G018300 Sobic010G275001--Sobic001G381300 Sobic010G275001--Sobic003G037100 Sobic010G275001--Sobic005G226100 Sobic010G275001--Sobic009G067400 Sobic010G275001--Sobic001G146400 Sobic010G275001--Sobic001G146500 Sobic002G202800 Sobic002G202800 Sobic010G275001--Sobic002G202800 Sobic010G172300 Sobic010G172300 Sobic002G249600--Sobic010G172300 Sobic003G258700 Sobic003G258700 Sobic002G249600--Sobic003G258700 Sobic002G249600--Sobic002G202800 Sobic002G249600--Sobic004G160300 Sobic002G249600--Sobic003G291700 Sobic002G064200 Sobic002G064200 Sobic002G249600--Sobic002G064200 Sobic008G060300 Sobic008G060300 Sobic002G249600--Sobic008G060300 Sobic002G202700 Sobic002G202700 Sobic002G249600--Sobic002G202700 Sobic006G113900 Sobic006G113900 Sobic002G249600--Sobic006G113900 Sobic001G144400 Sobic001G144400 Sobic006G190000--Sobic001G144400 Sobic006G190000--Sobic009G067400 Sobic006G190000--Sobic001G381300 Sobic001G319100 Sobic001G319100 Sobic006G190000--Sobic001G319100 Sobic009G173900 Sobic009G173900 Sobic006G190000--Sobic009G173900 Sobic004G101000 Sobic004G101000 Sobic006G190000--Sobic004G101000 Sobic006G190000--Sobic010G018300 Sobic006G190000--Sobic001G146400 Sobic009G216050 Sobic009G216050 Sobic006G190000--Sobic009G216050 Sobic002G214500 Sobic002G214500 Sobic008G070900--Sobic002G214500 Sobic004G109300 Sobic004G109300 Sobic008G070900--Sobic004G109300 Sobic001G321700 Sobic001G321700 Sobic008G070900--Sobic001G321700 Sobic001G280300 Sobic001G280300 Sobic008G070900--Sobic001G280300 Sobic003G024900 Sobic003G024900 Sobic008G070900--Sobic003G024900 Sobic008G070900--Sobic004G181300 Sobic001G319000 Sobic001G319000 Sobic008G070900--Sobic001G319000 Sobic001G213500 Sobic001G213500 Sobic008G070900--Sobic001G213500 Sobic001G330925 Sobic001G330925 Sobic008G070900--Sobic001G330925 Sobic004G138400 Sobic004G138400 Sobic003G325100--Sobic004G138400 Sobic003G325100--Sobic002G202800 Sobic010G004500 Sobic010G004500 Sobic003G325100--Sobic010G004500 Sobic003G325100--Sobic002G064200 Sobic008G095100 Sobic008G095100 Sobic003G325100--Sobic008G095100 Sobic009G111800 Sobic009G111800 Sobic003G325100--Sobic009G111800 Sobic003G242800 Sobic003G242800 Sobic003G325100--Sobic003G242800 Sobic004G106200 Sobic004G106200 Sobic003G325100--Sobic004G106200 Sobic001G059300 Sobic001G059300 Sobic003G325100--Sobic001G059300
Octagon: transcription factors


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