Gene annotation
Transcriptome id Sobic.008G070900.1
Synonym Sb08g006240
Functional annotation expressed protein
UniProt C5YTI4
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02816 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os12g09620.1 : expressed protein
MaizeGDB (Corn) Zm00025a029533 , Zm00025a025661
Brachypodium KQJ91909
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G214500 major ampullate spidroin 2, putative, expressed -
2 Sobic.004G109300 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.001G321700 dehydration response related protein, putative, expressed -
4 Sobic.001G280300 receptor-like protein kinase, putative, expressed -
5 Sobic.003G024900 carnitine racemase like protein, putative, expressed -
6 Sobic.004G181300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
7 Sobic.001G319000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.001G213500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G330925 - -
10 Sobic.003G366200 harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.010G131600 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
12 Sobic.008G126800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.004G049400 wound induced protein, putative, expressed -
14 Sobic.005G102401 - -
15 Sobic.004G112400 plant protein of unknown function domain containing protein, expressed -
16 Sobic.001G299400 metalloendoproteinase 1 precursor, putative, expressed -
17 Sobic.002G249600 OsWAK80 - OsWAK receptor-like protein kinase, expressed -
18 Sobic.009G115500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
20 Sobic.009G173800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein, putative, expressed -


Gene co-expression network
sample Sobic008G070900 Sobic008G070900 Sobic002G214500 Sobic002G214500 Sobic008G070900--Sobic002G214500 Sobic004G109300 Sobic004G109300 Sobic008G070900--Sobic004G109300 Sobic001G321700 Sobic001G321700 Sobic008G070900--Sobic001G321700 Sobic001G280300 Sobic001G280300 Sobic008G070900--Sobic001G280300 Sobic003G024900 Sobic003G024900 Sobic008G070900--Sobic003G024900 Sobic004G181300 Sobic004G181300 Sobic008G070900--Sobic004G181300 Sobic001G319000 Sobic001G319000 Sobic008G070900--Sobic001G319000 Sobic001G213500 Sobic001G213500 Sobic008G070900--Sobic001G213500 Sobic001G330925 Sobic001G330925 Sobic008G070900--Sobic001G330925 Sobic010G018300 Sobic010G018300 Sobic002G214500--Sobic010G018300 Sobic005G226100 Sobic005G226100 Sobic002G214500--Sobic005G226100 Sobic010G131600 Sobic010G131600 Sobic002G214500--Sobic010G131600 Sobic003G037100 Sobic003G037100 Sobic002G214500--Sobic003G037100 Sobic009G121600 Sobic009G121600 Sobic002G214500--Sobic009G121600 Sobic002G214500--Sobic001G330925 Sobic009G067400 Sobic009G067400 Sobic002G214500--Sobic009G067400 Sobic002G214500--Sobic008G070900 Sobic001G146500 Sobic001G146500 Sobic002G214500--Sobic001G146500 Sobic004G109300--Sobic008G070900 Sobic002G311300 Sobic002G311300 Sobic004G109300--Sobic002G311300 Sobic004G109300--Sobic003G024900 Sobic003G265150 Sobic003G265150 Sobic004G109300--Sobic003G265150 Sobic001G432600 Sobic001G432600 Sobic004G109300--Sobic001G432600 Sobic002G248800 Sobic002G248800 Sobic004G109300--Sobic002G248800 Sobic010G207250 Sobic010G207250 Sobic004G109300--Sobic010G207250 Sobic001G299300 Sobic001G299300 Sobic004G109300--Sobic001G299300 Sobic008G127000 Sobic008G127000 Sobic004G109300--Sobic008G127000 Sobic004G106200 Sobic004G106200 Sobic001G321700--Sobic004G106200 Sobic009G111800 Sobic009G111800 Sobic001G321700--Sobic009G111800 Sobic001G476100 Sobic001G476100 Sobic001G321700--Sobic001G476100 Sobic010G065001 Sobic010G065001 Sobic001G321700--Sobic010G065001 Sobic004G109100 Sobic004G109100 Sobic001G321700--Sobic004G109100 Sobic001G321700--Sobic001G319000 Sobic008G081500 Sobic008G081500 Sobic001G321700--Sobic008G081500 Sobic009G074200 Sobic009G074200 Sobic001G321700--Sobic009G074200 Sobic004G242900 Sobic004G242900 Sobic001G321700--Sobic004G242900 Sobic002G041900 Sobic002G041900 Sobic001G280300--Sobic002G041900 Sobic007G179200 Sobic007G179200 Sobic001G280300--Sobic007G179200 Sobic008G040800 Sobic008G040800 Sobic001G280300--Sobic008G040800 Sobic001G431600 Sobic001G431600 Sobic001G280300--Sobic001G431600 Sobic006G112000 Sobic006G112000 Sobic001G280300--Sobic006G112000 Sobic009G209150 Sobic009G209150 Sobic001G280300--Sobic009G209150 Sobic010G265400 Sobic010G265400 Sobic001G280300--Sobic010G265400 Sobic006G052250 Sobic006G052250 Sobic001G280300--Sobic006G052250 Sobic005G060400 Sobic005G060400 Sobic001G280300--Sobic005G060400 Sobic003G024900--Sobic002G311300 Sobic002G235500 Sobic002G235500 Sobic003G024900--Sobic002G235500 Sobic007G108700 Sobic007G108700 Sobic003G024900--Sobic007G108700 Sobic002G348500 Sobic002G348500 Sobic003G024900--Sobic002G348500 Sobic004G287000 Sobic004G287000 Sobic003G024900--Sobic004G287000 Sobic003G212300 Sobic003G212300 Sobic003G024900--Sobic003G212300 Sobic001G108800 Sobic001G108800 Sobic003G024900--Sobic001G108800 Sobic005G013600 Sobic005G013600 Sobic003G024900--Sobic005G013600 Sobic001G021900 Sobic001G021900 Sobic003G024900--Sobic001G021900 Sobic004G181300--Sobic010G018300 Sobic001G146400 Sobic001G146400 Sobic004G181300--Sobic001G146400 Sobic010G163150 Sobic010G163150 Sobic004G181300--Sobic010G163150 Sobic004G169900 Sobic004G169900 Sobic004G181300--Sobic004G169900 Sobic004G160300 Sobic004G160300 Sobic004G181300--Sobic004G160300 Sobic002G386200 Sobic002G386200 Sobic004G181300--Sobic002G386200 Sobic004G181300--Sobic003G037100 Sobic004G181300--Sobic001G146500 Sobic002G241250 Sobic002G241250 Sobic004G181300--Sobic002G241250 Sobic008G126800 Sobic008G126800 Sobic001G319000--Sobic008G126800 Sobic005G097500 Sobic005G097500 Sobic001G319000--Sobic005G097500 Sobic003G255800 Sobic003G255800 Sobic001G319000--Sobic003G255800 Sobic001G319000--Sobic001G321700 Sobic003G403600 Sobic003G403600 Sobic001G319000--Sobic003G403600 Sobic001G319000--Sobic010G065001 Sobic007G089400 Sobic007G089400 Sobic001G319000--Sobic007G089400 Sobic010G193100 Sobic010G193100 Sobic001G319000--Sobic010G193100 Sobic006G202900 Sobic006G202900 Sobic001G319000--Sobic006G202900 Sobic001G319200 Sobic001G319200 Sobic001G213500--Sobic001G319200 Sobic006G246100 Sobic006G246100 Sobic001G213500--Sobic006G246100 Sobic001G213500--Sobic008G070900 Sobic007G115500 Sobic007G115500 Sobic001G213500--Sobic007G115500 Sobic004G195000 Sobic004G195000 Sobic001G213500--Sobic004G195000 Sobic002G377100 Sobic002G377100 Sobic001G213500--Sobic002G377100 Sobic004G101000 Sobic004G101000 Sobic001G213500--Sobic004G101000 Sobic010G194300 Sobic010G194300 Sobic001G213500--Sobic010G194300 Sobic001G213500--Sobic002G214500 Sobic004G138400 Sobic004G138400 Sobic001G330925--Sobic004G138400 Sobic002G202800 Sobic002G202800 Sobic001G330925--Sobic002G202800 Sobic009G115500 Sobic009G115500 Sobic001G330925--Sobic009G115500 Sobic001G330925--Sobic002G214500 Sobic003G401500 Sobic003G401500 Sobic001G330925--Sobic003G401500 Sobic003G242800 Sobic003G242800 Sobic001G330925--Sobic003G242800 Sobic003G325100 Sobic003G325100 Sobic001G330925--Sobic003G325100 Sobic003G258700 Sobic003G258700 Sobic001G330925--Sobic003G258700 Sobic002G354400 Sobic002G354400 Sobic001G330925--Sobic002G354400
Octagon: transcription factors


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