Gene annotation
Transcriptome id Sobic.001G213500.1
Synonym Sb01g018870
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WYA4
Pfam -
Panther DB PTHR34379 PTHR34379:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G08240 : -
RAP-DB (Rice) LOC_Os10g34450.1 : expressed protein
MaizeGDB (Corn) Zm00025a006547
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G319200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.006G246100 one cut domain family member 3, putative, expressed -
3 Sobic.008G070900 expressed protein -
4 Sobic.007G115500 plant protein of unknown function domain containing protein, expressed -
5 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -
6 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
7 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.010G194300 VQ domain containing protein, putative, expressed -
9 Sobic.002G214500 major ampullate spidroin 2, putative, expressed -
10 Sobic.008G188000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
11 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
12 Sobic.003G296300 WRKY13, expressed -
13 Sobic.003G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox domain containing protein, expressed -
14 Sobic.009G173900 expressed protein -
15 Sobic.006G113000 Copper transport protein family("PubMedID : 26759170,PubMedID : 24597475")@expressed protein -
16 Sobic.004G233400 - -
17 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G040400 EF hand family protein, putative, expressed -
19 Sobic.010G075600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
20 Sobic.003G024900 carnitine racemase like protein, putative, expressed -


Gene co-expression network
sample Sobic001G213500 Sobic001G213500 Sobic001G319200 Sobic001G319200 Sobic001G213500--Sobic001G319200 Sobic006G246100 Sobic006G246100 Sobic001G213500--Sobic006G246100 Sobic008G070900 Sobic008G070900 Sobic001G213500--Sobic008G070900 Sobic007G115500 Sobic007G115500 Sobic001G213500--Sobic007G115500 Sobic004G195000 Sobic004G195000 Sobic001G213500--Sobic004G195000 Sobic002G377100 Sobic002G377100 Sobic001G213500--Sobic002G377100 Sobic004G101000 Sobic004G101000 Sobic001G213500--Sobic004G101000 Sobic010G194300 Sobic010G194300 Sobic001G213500--Sobic010G194300 Sobic002G214500 Sobic002G214500 Sobic001G213500--Sobic002G214500 Sobic001G319200--Sobic004G195000 Sobic005G080200 Sobic005G080200 Sobic001G319200--Sobic005G080200 Sobic001G319200--Sobic006G246100 Sobic006G113000 Sobic006G113000 Sobic001G319200--Sobic006G113000 Sobic002G067300 Sobic002G067300 Sobic001G319200--Sobic002G067300 Sobic001G432700 Sobic001G432700 Sobic001G319200--Sobic001G432700 Sobic001G319200--Sobic010G194300 Sobic010G192900 Sobic010G192900 Sobic001G319200--Sobic010G192900 Sobic003G360200 Sobic003G360200 Sobic001G319200--Sobic003G360200 Sobic003G296300 Sobic003G296300 Sobic006G246100--Sobic003G296300 Sobic006G246100--Sobic005G080200 Sobic006G246100--Sobic010G194300 Sobic002G319100 Sobic002G319100 Sobic006G246100--Sobic002G319100 Sobic001G345400 Sobic001G345400 Sobic006G246100--Sobic001G345400 Sobic004G114400 Sobic004G114400 Sobic006G246100--Sobic004G114400 Sobic004G010300 Sobic004G010300 Sobic006G246100--Sobic004G010300 Sobic010G194900 Sobic010G194900 Sobic006G246100--Sobic010G194900 Sobic006G246100--Sobic004G195000 Sobic008G070900--Sobic002G214500 Sobic004G109300 Sobic004G109300 Sobic008G070900--Sobic004G109300 Sobic001G321700 Sobic001G321700 Sobic008G070900--Sobic001G321700 Sobic001G280300 Sobic001G280300 Sobic008G070900--Sobic001G280300 Sobic003G024900 Sobic003G024900 Sobic008G070900--Sobic003G024900 Sobic004G181300 Sobic004G181300 Sobic008G070900--Sobic004G181300 Sobic001G319000 Sobic001G319000 Sobic008G070900--Sobic001G319000 Sobic008G070900--Sobic001G213500 Sobic001G330925 Sobic001G330925 Sobic008G070900--Sobic001G330925 Sobic003G228200 Sobic003G228200 Sobic007G115500--Sobic003G228200 Sobic002G327300 Sobic002G327300 Sobic007G115500--Sobic002G327300 Sobic001G318200 Sobic001G318200 Sobic007G115500--Sobic001G318200 Sobic007G127100 Sobic007G127100 Sobic007G115500--Sobic007G127100 Sobic002G024000 Sobic002G024000 Sobic007G115500--Sobic002G024000 Sobic009G065300 Sobic009G065300 Sobic007G115500--Sobic009G065300 Sobic007G115500--Sobic003G360200 Sobic003G192100 Sobic003G192100 Sobic007G115500--Sobic003G192100 Sobic007G115500--Sobic005G080200 Sobic004G195000--Sobic001G319200 Sobic004G195000--Sobic006G246100 Sobic003G277500 Sobic003G277500 Sobic004G195000--Sobic003G277500 Sobic004G195000--Sobic005G080200 Sobic004G195000--Sobic003G296300 Sobic002G407700 Sobic002G407700 Sobic004G195000--Sobic002G407700 Sobic001G403300 Sobic001G403300 Sobic004G195000--Sobic001G403300 Sobic004G195000--Sobic002G377100 Sobic005G155600 Sobic005G155600 Sobic004G195000--Sobic005G155600 Sobic003G250600 Sobic003G250600 Sobic002G377100--Sobic003G250600 Sobic001G059400 Sobic001G059400 Sobic002G377100--Sobic001G059400 Sobic003G254900 Sobic003G254900 Sobic002G377100--Sobic003G254900 Sobic003G102200 Sobic003G102200 Sobic002G377100--Sobic003G102200 Sobic001G195100 Sobic001G195100 Sobic002G377100--Sobic001G195100 Sobic010G163000 Sobic010G163000 Sobic002G377100--Sobic010G163000 Sobic001G449700 Sobic001G449700 Sobic002G377100--Sobic001G449700 Sobic004G297100 Sobic004G297100 Sobic002G377100--Sobic004G297100 Sobic002G333400 Sobic002G333400 Sobic002G377100--Sobic002G333400 Sobic004G101000--Sobic001G345400 Sobic009G216050 Sobic009G216050 Sobic004G101000--Sobic009G216050 Sobic004G101000--Sobic003G296300 Sobic009G038000 Sobic009G038000 Sobic004G101000--Sobic009G038000 Sobic002G407200 Sobic002G407200 Sobic004G101000--Sobic002G407200 Sobic010G214200 Sobic010G214200 Sobic004G101000--Sobic010G214200 Sobic001G314800 Sobic001G314800 Sobic004G101000--Sobic001G314800 Sobic004G101000--Sobic001G195100 Sobic003G310500 Sobic003G310500 Sobic004G101000--Sobic003G310500 Sobic010G194300--Sobic006G246100 Sobic010G194300--Sobic005G080200 Sobic010G194300--Sobic004G010300 Sobic003G285500 Sobic003G285500 Sobic010G194300--Sobic003G285500 Sobic010G194300--Sobic003G296300 Sobic003G037500 Sobic003G037500 Sobic010G194300--Sobic003G037500 Sobic010G194300--Sobic009G065300 Sobic006G047000 Sobic006G047000 Sobic010G194300--Sobic006G047000 Sobic010G250600 Sobic010G250600 Sobic010G194300--Sobic010G250600 Sobic010G018300 Sobic010G018300 Sobic002G214500--Sobic010G018300 Sobic005G226100 Sobic005G226100 Sobic002G214500--Sobic005G226100 Sobic010G131600 Sobic010G131600 Sobic002G214500--Sobic010G131600 Sobic003G037100 Sobic003G037100 Sobic002G214500--Sobic003G037100 Sobic009G121600 Sobic009G121600 Sobic002G214500--Sobic009G121600 Sobic002G214500--Sobic001G330925 Sobic009G067400 Sobic009G067400 Sobic002G214500--Sobic009G067400 Sobic002G214500--Sobic008G070900 Sobic001G146500 Sobic001G146500 Sobic002G214500--Sobic001G146500
Octagon: transcription factors


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