Gene annotation
Transcriptome id Sobic.001G040400.2
Synonym Sb01g003730
Functional annotation EF hand family protein, putative, expressed
UniProt A0A1Z5S4R2
Pfam PF13499
Panther DB PTHR10891 PTHR10891:SF584
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G59440 : Calcium-binding EF-hand family protein
RAP-DB (Rice) LOC_Os03g59770.1 : EF hand family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G111520.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G381300 WRKY79, expressed -
2 Sobic.007G115500 plant protein of unknown function domain containing protein, expressed -
3 Sobic.009G173900 expressed protein -
4 Sobic.010G224600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR26 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
5 Sobic.009G121600 cytochrome P450 86A2, putative, expressed -
6 Sobic.002G067300 ATPase, putative, expressed -
7 Sobic.005G226100 ZOS11-10 - C2H2 zinc finger protein, expressed -
8 Sobic.003G199600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
10 Sobic.001G339300 expressed protein -
11 Sobic.008G188000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
12 Sobic.001G059400 acetyltransferase, GNAT family, putative, expressed -
13 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G319200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.001G339200 - -
16 Sobic.010G059800 hydroxylase, putative, expressed -
17 Sobic.010G275001 - -
18 Sobic.010G018300 expressed protein -
19 Sobic.004G158050 - -
20 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -


Gene co-expression network
sample Sobic001G040400 Sobic001G040400 Sobic001G381300 Sobic001G381300 Sobic001G040400--Sobic001G381300 Sobic007G115500 Sobic007G115500 Sobic001G040400--Sobic007G115500 Sobic009G173900 Sobic009G173900 Sobic001G040400--Sobic009G173900 Sobic010G224600 Sobic010G224600 Sobic001G040400--Sobic010G224600 Sobic009G121600 Sobic009G121600 Sobic001G040400--Sobic009G121600 Sobic002G067300 Sobic002G067300 Sobic001G040400--Sobic002G067300 Sobic005G226100 Sobic005G226100 Sobic001G040400--Sobic005G226100 Sobic003G199600 Sobic003G199600 Sobic001G040400--Sobic003G199600 Sobic002G386200 Sobic002G386200 Sobic001G040400--Sobic002G386200 Sobic001G381300--Sobic005G226100 Sobic005G193600 Sobic005G193600 Sobic001G381300--Sobic005G193600 Sobic008G181801 Sobic008G181801 Sobic001G381300--Sobic008G181801 Sobic006G246200 Sobic006G246200 Sobic001G381300--Sobic006G246200 Sobic001G146500 Sobic001G146500 Sobic001G381300--Sobic001G146500 Sobic009G241500 Sobic009G241500 Sobic001G381300--Sobic009G241500 Sobic001G381300--Sobic009G121600 Sobic003G037100 Sobic003G037100 Sobic001G381300--Sobic003G037100 Sobic006G229500 Sobic006G229500 Sobic001G381300--Sobic006G229500 Sobic003G228200 Sobic003G228200 Sobic007G115500--Sobic003G228200 Sobic002G327300 Sobic002G327300 Sobic007G115500--Sobic002G327300 Sobic001G318200 Sobic001G318200 Sobic007G115500--Sobic001G318200 Sobic007G127100 Sobic007G127100 Sobic007G115500--Sobic007G127100 Sobic002G024000 Sobic002G024000 Sobic007G115500--Sobic002G024000 Sobic009G065300 Sobic009G065300 Sobic007G115500--Sobic009G065300 Sobic003G360200 Sobic003G360200 Sobic007G115500--Sobic003G360200 Sobic003G192100 Sobic003G192100 Sobic007G115500--Sobic003G192100 Sobic005G080200 Sobic005G080200 Sobic007G115500--Sobic005G080200 Sobic006G190000 Sobic006G190000 Sobic009G173900--Sobic006G190000 Sobic009G173900--Sobic003G199600 Sobic009G173900--Sobic007G115500 Sobic001G146400 Sobic001G146400 Sobic009G173900--Sobic001G146400 Sobic006G113000 Sobic006G113000 Sobic009G173900--Sobic006G113000 Sobic010G102150 Sobic010G102150 Sobic009G173900--Sobic010G102150 Sobic010G018300 Sobic010G018300 Sobic009G173900--Sobic010G018300 Sobic009G173900--Sobic010G224600 Sobic009G173900--Sobic001G381300 Sobic010G224600--Sobic001G381300 Sobic004G209500 Sobic004G209500 Sobic010G224600--Sobic004G209500 Sobic001G319100 Sobic001G319100 Sobic010G224600--Sobic001G319100 Sobic010G224600--Sobic009G121600 Sobic004G101000 Sobic004G101000 Sobic010G224600--Sobic004G101000 Sobic010G224600--Sobic005G226100 Sobic005G082700 Sobic005G082700 Sobic010G224600--Sobic005G082700 Sobic002G216500 Sobic002G216500 Sobic010G224600--Sobic002G216500 Sobic009G216050 Sobic009G216050 Sobic010G224600--Sobic009G216050 Sobic009G121600--Sobic005G226100 Sobic009G121600--Sobic006G246200 Sobic009G121600--Sobic003G037100 Sobic009G121600--Sobic001G381300 Sobic001G362001 Sobic001G362001 Sobic009G121600--Sobic001G362001 Sobic009G121600--Sobic010G018300 Sobic009G121600--Sobic005G082700 Sobic009G121600--Sobic009G241500 Sobic009G121600--Sobic009G216050 Sobic002G067300--Sobic006G113000 Sobic001G319200 Sobic001G319200 Sobic002G067300--Sobic001G319200 Sobic002G067300--Sobic007G115500 Sobic006G021900 Sobic006G021900 Sobic002G067300--Sobic006G021900 Sobic002G067300--Sobic003G360200 Sobic006G009000 Sobic006G009000 Sobic002G067300--Sobic006G009000 Sobic002G067300--Sobic002G024000 Sobic006G031200 Sobic006G031200 Sobic002G067300--Sobic006G031200 Sobic005G161100 Sobic005G161100 Sobic002G067300--Sobic005G161100 Sobic005G226100--Sobic008G181801 Sobic005G226100--Sobic009G241500 Sobic005G226100--Sobic003G037100 Sobic005G226100--Sobic001G381300 Sobic002G269032 Sobic002G269032 Sobic005G226100--Sobic002G269032 Sobic005G226100--Sobic009G121600 Sobic005G226100--Sobic005G082700 Sobic005G226100--Sobic006G246200 Sobic001G259500 Sobic001G259500 Sobic005G226100--Sobic001G259500 Sobic003G199600--Sobic009G173900 Sobic003G199600--Sobic007G115500 Sobic003G199600--Sobic005G080200 Sobic003G199600--Sobic006G113000 Sobic003G199600--Sobic002G067300 Sobic003G417000 Sobic003G417000 Sobic003G199600--Sobic003G417000 Sobic003G199600--Sobic001G040400 Sobic003G199600--Sobic001G319200 Sobic004G010300 Sobic004G010300 Sobic003G199600--Sobic004G010300 Sobic002G386200--Sobic010G018300 Sobic002G386200--Sobic001G146400 Sobic004G181200 Sobic004G181200 Sobic002G386200--Sobic004G181200 Sobic002G386200--Sobic001G146500 Sobic002G174300 Sobic002G174300 Sobic002G386200--Sobic002G174300 Sobic002G386200--Sobic006G246200 Sobic006G113400 Sobic006G113400 Sobic002G386200--Sobic006G113400 Sobic002G241250 Sobic002G241250 Sobic002G386200--Sobic002G241250 Sobic002G386200--Sobic001G381300
Octagon: transcription factors


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